RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 TRAV10A0A0B4J240 114 aa10.94□□□□□ -0.66
PCIF1-201ENST00000372409 PRB2P02812 416 aaPredicted RBP10.93□□□□□ -0.66
PCIF1-201ENST00000372409 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
PCIF1-201ENST00000372409 C7orf33Q8WU49 177 aa10.92□□□□□ -0.66
PCIF1-201ENST00000372409 DPH3Q96FX2 82 aa10.91□□□□□ -0.66
PCIF1-201ENST00000372409 RPL37AP8A6NKH3 93 aa10.91□□□□□ -0.66
PCIF1-201ENST00000372409 TRAV7A0A075B6U4 112 aa10.9□□□□□ -0.66
PCIF1-201ENST00000372409 F8WDY8 70 aa10.9□□□□□ -0.66
PCIF1-201ENST00000372409 DNAH10OSP0CZ25 163 aa10.9□□□□□ -0.66
PCIF1-201ENST00000372409 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
PCIF1-201ENST00000372409 FAM168BA1KXE4 195 aa10.88□□□□□ -0.67
PCIF1-201ENST00000372409 CASC10Q5T4H9 136 aa10.88□□□□□ -0.67
PCIF1-201ENST00000372409 FAM19A5Q7Z5A7 132 aaPredicted RBP10.88□□□□□ -0.67
PCIF1-201ENST00000372409 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
PCIF1-201ENST00000372409 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
PCIF1-201ENST00000372409 C3orf84H3BNL1 204 aa10.87□□□□□ -0.67
PCIF1-201ENST00000372409 BAHCC1Q9P281 2608 aa10.87□□□□□ -0.67
PCIF1-201ENST00000372409 LINC00588Q9Y4M8 146 aa10.86□□□□□ -0.67
PCIF1-201ENST00000372409 Q8N9L7 120 aa10.86□□□□□ -0.67
PCIF1-201ENST00000372409 BCE1O60756 84 aa10.85□□□□□ -0.67
PCIF1-201ENST00000372409 Q8N377 158 aa10.85□□□□□ -0.67
PCIF1-201ENST00000372409 NREPQ16612 68 aa10.85□□□□□ -0.67
PCIF1-201ENST00000372409 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
PCIF1-201ENST00000372409 LYSTQ99698 3801 aa10.85□□□□□ -0.67
PCIF1-201ENST00000372409 CSMD3Q7Z407 3707 aa10.84□□□□□ -0.67
PCIF1-201ENST00000372409 SNURFQ9Y675 71 aa10.84□□□□□ -0.67
PCIF1-201ENST00000372409 TM2D3Q9BRN9 247 aa10.83□□□□□ -0.68
PCIF1-201ENST00000372409 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
PCIF1-201ENST00000372409 TLX1NBP0CAT3 122 aa10.82□□□□□ -0.68
PCIF1-201ENST00000372409 MGAM2Q2M2H8 2515 aa10.81□□□□□ -0.68
PCIF1-201ENST00000372409 OXTP01178 125 aa10.81□□□□□ -0.68
PCIF1-201ENST00000372409 Q6ZRX8 168 aa10.81□□□□□ -0.68
PCIF1-201ENST00000372409 RMI2Q96E14 147 aa10.8□□□□□ -0.68
PCIF1-201ENST00000372409 Q9BRP9 147 aa10.8□□□□□ -0.68
PCIF1-201ENST00000372409 DHRS4-AS1Q9P1J3 65 aa10.8□□□□□ -0.68
PCIF1-201ENST00000372409 IGLV1-50A0A075B6I6 118 aa10.79□□□□□ -0.68
PCIF1-201ENST00000372409 FAM236DA0A1B0GTK5 79 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 H7BZZ5 65 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 BPY2O14599 106 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 FAM236CP0DP71 79 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 ST20-AS1Q8NBB2 130 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 PLA2G2DQ9UNK4 145 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 PRYO14603 147 aa10.78□□□□□ -0.68
PCIF1-201ENST00000372409 TENM2Q9NT68 2774 aa10.76□□□□□ -0.69
PCIF1-201ENST00000372409 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
PCIF1-201ENST00000372409 IGKV4-1P06312 121 aa10.76□□□□□ -0.69
PCIF1-201ENST00000372409 KLKP1Q107X0 134 aa10.76□□□□□ -0.69
PCIF1-201ENST00000372409 KRTAP7-1Q8IUC3 87 aa10.76□□□□□ -0.69
PCIF1-201ENST00000372409 FUSP35637 526 aaKnown RBP eCLIP10.76□□□□□ -0.69
PCIF1-201ENST00000372409 KRTAP4-16G5E9R7 235 aaPredicted RBP10.75□□□□□ -0.69
PCIF1-201ENST00000372409 MRPL55Q7Z7F7 128 aaKnown RBP10.75□□□□□ -0.69
PCIF1-201ENST00000372409 UBE2BP63146 152 aa10.75□□□□□ -0.69
PCIF1-201ENST00000372409 F8WEM9 126 aa10.74□□□□□ -0.69
PCIF1-201ENST00000372409 IGLV5-37A0A075B6J1 123 aa10.73□□□□□ -0.69
PCIF1-201ENST00000372409 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
PCIF1-201ENST00000372409 ERC2-IT1O76042 136 aa10.73□□□□□ -0.69
PCIF1-201ENST00000372409 SPRR1AP35321 89 aa10.73□□□□□ -0.69
PCIF1-201ENST00000372409 A0A1W2PNM2 257 aa10.72□□□□□ -0.69
PCIF1-201ENST00000372409 COL7A1Q02388 2944 aa10.72□□□□□ -0.69
PCIF1-201ENST00000372409 DNAH3Q8TD57 4116 aa10.7□□□□□ -0.7
PCIF1-201ENST00000372409 STAB2Q8WWQ8 2551 aa10.68□□□□□ -0.7
PCIF1-201ENST00000372409 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
PCIF1-201ENST00000372409 TMEM254Q8TBM7 123 aa10.68□□□□□ -0.7
PCIF1-201ENST00000372409 IGKV2-24A0A0C4DH68 120 aa10.67□□□□□ -0.7
PCIF1-201ENST00000372409 K7EIL1 84 aa10.67□□□□□ -0.7
PCIF1-201ENST00000372409 TNP2Q05952 138 aa10.67□□□□□ -0.7
PCIF1-201ENST00000372409 Q8NBF4 154 aa10.66□□□□□ -0.7
PCIF1-201ENST00000372409 C4orf26Q17RF5 130 aa10.65□□□□□ -0.7
PCIF1-201ENST00000372409 SERP1Q9Y6X1 66 aa10.65□□□□□ -0.7
PCIF1-201ENST00000372409 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.71
PCIF1-201ENST00000372409 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.71
PCIF1-201ENST00000372409 OCR1Q9BZK8 76 aa10.64□□□□□ -0.71
PCIF1-201ENST00000372409 NDUFC1O43677 76 aa10.64□□□□□ -0.71
PCIF1-201ENST00000372409 A0A096LNI7 61 aa10.63□□□□□ -0.71
PCIF1-201ENST00000372409 A0A0G2JQZ4 141 aa10.63□□□□□ -0.71
PCIF1-201ENST00000372409 A0A1W2PNN7 141 aa10.63□□□□□ -0.71
PCIF1-201ENST00000372409 PSCAO43653 123 aa10.63□□□□□ -0.71
PCIF1-201ENST00000372409 Q5XG85 94 aa10.63□□□□□ -0.71
PCIF1-201ENST00000372409 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
PCIF1-201ENST00000372409 HUWE1Q7Z6Z7 4374 aaKnown RBP10.62□□□□□ -0.71
PCIF1-201ENST00000372409 A0A1B0GW54 56 aa10.62□□□□□ -0.71
PCIF1-201ENST00000372409 PRLHP81277 87 aa10.62□□□□□ -0.71
PCIF1-201ENST00000372409 KRTAP1-5Q9BYS1 174 aa10.61□□□□□ -0.71
PCIF1-201ENST00000372409 FAM30AQ9NZY2 134 aa10.61□□□□□ -0.71
PCIF1-201ENST00000372409 C5orf47Q569G3 176 aa10.6□□□□□ -0.71
PCIF1-201ENST00000372409 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.6□□□□□ -0.71
PCIF1-201ENST00000372409 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
PCIF1-201ENST00000372409 SPRR4Q96PI1 79 aa10.6□□□□□ -0.71
PCIF1-201ENST00000372409 HRCT1Q6UXD1 115 aa10.59□□□□□ -0.71
PCIF1-201ENST00000372409 HIGD2AQ9BW72 106 aa10.58□□□□□ -0.72
PCIF1-201ENST00000372409 SRRM2Q9UQ35 2752 aaKnown RBP10.57□□□□□ -0.72
PCIF1-201ENST00000372409 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
PCIF1-201ENST00000372409 C16orf90A8MZG2 172 aa10.57□□□□□ -0.72
PCIF1-201ENST00000372409 EPM2AB3EWF7 344 aa10.57□□□□□ -0.72
PCIF1-201ENST00000372409 A0A0U1RQV1 116 aa10.56□□□□□ -0.72
PCIF1-201ENST00000372409 K7EQZ3 153 aa10.56□□□□□ -0.72
PCIF1-201ENST00000372409 DSCR10P59022 87 aa10.56□□□□□ -0.72
PCIF1-201ENST00000372409 IGFL1Q6UW32 110 aa10.54□□□□□ -0.72
PCIF1-201ENST00000372409 DEFB116Q30KQ4 102 aa10.54□□□□□ -0.72
PCIF1-201ENST00000372409 DNAH7Q8WXX0 4024 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms