RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
DEPDC1-201ENST00000370966 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.15
DEPDC1-201ENST00000370966 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
DEPDC1-201ENST00000370966 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
DEPDC1-201ENST00000370966 TLX1NBP0CAT3 122 aa7.83□□□□□ -1.16
DEPDC1-201ENST00000370966 LAMA3Q16787 3333 aa7.83□□□□□ -1.16
DEPDC1-201ENST00000370966 MGAQ8IWI9 3026 aa7.83□□□□□ -1.16
DEPDC1-201ENST00000370966 K7EIL1 84 aa7.82□□□□□ -1.16
DEPDC1-201ENST00000370966 WIPF1O43516 503 aa7.82□□□□□ -1.16
DEPDC1-201ENST00000370966 CFAP54Q96N23 3096 aa7.82□□□□□ -1.16
DEPDC1-201ENST00000370966 PLA2G2DQ9UNK4 145 aa7.81□□□□□ -1.16
DEPDC1-201ENST00000370966 MKI67P46013 3256 aaKnown RBP7.8□□□□□ -1.16
DEPDC1-201ENST00000370966 AKAP13Q12802 2813 aa7.8□□□□□ -1.16
DEPDC1-201ENST00000370966 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
DEPDC1-201ENST00000370966 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
DEPDC1-201ENST00000370966 IGKV2-30P06310 120 aa7.79□□□□□ -1.16
DEPDC1-201ENST00000370966 A8MWP4 228 aa7.79□□□□□ -1.16
DEPDC1-201ENST00000370966 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
DEPDC1-201ENST00000370966 Q8N377 158 aa7.79□□□□□ -1.16
DEPDC1-201ENST00000370966 LINC01600Q96MT4 127 aa7.78□□□□□ -1.16
DEPDC1-201ENST00000370966 LAMA2P24043 3122 aaKnown RBP7.78□□□□□ -1.16
DEPDC1-201ENST00000370966 ACYP2P14621 99 aa7.78□□□□□ -1.16
DEPDC1-201ENST00000370966 SPINK1P00995 79 aa7.78□□□□□ -1.16
DEPDC1-201ENST00000370966 K7EQZ3 153 aa7.77□□□□□ -1.17
DEPDC1-201ENST00000370966 RPL37AP61513 92 aaKnown RBP7.76□□□□□ -1.17
DEPDC1-201ENST00000370966 C9orf163Q8N9P6 203 aa7.76□□□□□ -1.17
DEPDC1-201ENST00000370966 KLKP1Q107X0 134 aa7.76□□□□□ -1.17
DEPDC1-201ENST00000370966 BRCA2P51587 3418 aa7.75□□□□□ -1.17
DEPDC1-201ENST00000370966 IGFL1Q6UW32 110 aa7.75□□□□□ -1.17
DEPDC1-201ENST00000370966 LINC00313P59037 77 aa7.75□□□□□ -1.17
DEPDC1-201ENST00000370966 WWC2-AS2Q96NR7 200 aa7.74□□□□□ -1.17
DEPDC1-201ENST00000370966 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
DEPDC1-201ENST00000370966 FAM104AQ969W3 186 aa7.73□□□□□ -1.17
DEPDC1-201ENST00000370966 CHD6Q8TD26 2715 aa7.73□□□□□ -1.17
DEPDC1-201ENST00000370966 LOC101927531A0A1B0GV80 90 aa7.73□□□□□ -1.17
DEPDC1-201ENST00000370966 TYMSOSQ8TAI1 123 aa7.72□□□□□ -1.17
DEPDC1-201ENST00000370966 WDFY4Q6ZS81 3184 aa7.72□□□□□ -1.17
DEPDC1-201ENST00000370966 PRR15Q8IV56 129 aa7.72□□□□□ -1.17
DEPDC1-201ENST00000370966 MRPL34Q9BQ48 92 aaKnown RBP7.71□□□□□ -1.17
DEPDC1-201ENST00000370966 A0A1B0GU69 56 aa7.71□□□□□ -1.18
DEPDC1-201ENST00000370966 C7orf65Q6ZTY9 151 aa7.71□□□□□ -1.18
DEPDC1-201ENST00000370966 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
DEPDC1-201ENST00000370966 OBSCN-AS1Q96MR7 158 aa7.7□□□□□ -1.18
DEPDC1-201ENST00000370966 CNBPP62633 177 aaKnown RBP7.7□□□□□ -1.18
DEPDC1-201ENST00000370966 SSBP3-AS1Q7Z2R9 100 aa7.69□□□□□ -1.18
DEPDC1-201ENST00000370966 ZNF861PO60384 105 aa7.69□□□□□ -1.18
DEPDC1-201ENST00000370966 CD164Q04900 197 aa7.68□□□□□ -1.18
DEPDC1-201ENST00000370966 A0A087WTM6 91 aa7.68□□□□□ -1.18
DEPDC1-201ENST00000370966 SPAG11AQ6PDA7 123 aa7.68□□□□□ -1.18
DEPDC1-201ENST00000370966 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
DEPDC1-201ENST00000370966 IGLV5-48A0A075B6I7 105 aa7.67□□□□□ -1.18
DEPDC1-201ENST00000370966 PRUNE2Q8WUY3 3088 aa7.66□□□□□ -1.18
DEPDC1-201ENST00000370966 A0A1W2PNM2 257 aa7.66□□□□□ -1.18
DEPDC1-201ENST00000370966 H7BZZ5 65 aa7.66□□□□□ -1.18
DEPDC1-201ENST00000370966 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.18
DEPDC1-201ENST00000370966 CASC10Q5T4H9 136 aa7.65□□□□□ -1.19
DEPDC1-201ENST00000370966 A0A1W2PNN7 141 aa7.64□□□□□ -1.19
DEPDC1-201ENST00000370966 APLNQ9ULZ1 77 aa7.64□□□□□ -1.19
DEPDC1-201ENST00000370966 PLA2G1BP04054 148 aaKnown RBP7.64□□□□□ -1.19
DEPDC1-201ENST00000370966 TEX15Q9BXT5 2789 aa7.63□□□□□ -1.19
DEPDC1-201ENST00000370966 TEP1Q99973 2627 aaKnown RBP7.63□□□□□ -1.19
DEPDC1-201ENST00000370966 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
DEPDC1-201ENST00000370966 STAB1Q9NY15 2570 aa7.62□□□□□ -1.19
DEPDC1-201ENST00000370966 DSPP15924 2871 aaKnown RBP7.62□□□□□ -1.19
DEPDC1-201ENST00000370966 CR1P17927 2039 aa7.62□□□□□ -1.19
DEPDC1-201ENST00000370966 MAP1AP78559 2803 aaPredicted RBP7.61□□□□□ -1.19
DEPDC1-201ENST00000370966 A8MUN3 132 aa7.61□□□□□ -1.19
DEPDC1-201ENST00000370966 Q96NJ1 140 aa7.6□□□□□ -1.19
DEPDC1-201ENST00000370966 USP34Q70CQ2 3546 aa7.6□□□□□ -1.19
DEPDC1-201ENST00000370966 A0A0G2JQZ4 141 aa7.59□□□□□ -1.19
DEPDC1-201ENST00000370966 COA5Q86WW8 74 aa7.59□□□□□ -1.19
DEPDC1-201ENST00000370966 SPRR4Q96PI1 79 aa7.59□□□□□ -1.19
DEPDC1-201ENST00000370966 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
DEPDC1-201ENST00000370966 TRIOO75962 3097 aa7.59□□□□□ -1.19
DEPDC1-201ENST00000370966 VPS13AQ96RL7 3174 aa7.58□□□□□ -1.2
DEPDC1-201ENST00000370966 COL6A5A8TX70 2615 aa7.58□□□□□ -1.2
DEPDC1-201ENST00000370966 UNC79Q9P2D8 2635 aa7.58□□□□□ -1.2
DEPDC1-201ENST00000370966 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
DEPDC1-201ENST00000370966 UNC80Q8N2C7 3258 aa7.58□□□□□ -1.2
DEPDC1-201ENST00000370966 IGLV7-43P04211 117 aa7.57□□□□□ -1.2
DEPDC1-201ENST00000370966 Q5XG85 94 aa7.57□□□□□ -1.2
DEPDC1-201ENST00000370966 GCN1Q92616 2671 aaKnown RBP7.56□□□□□ -1.2
DEPDC1-201ENST00000370966 NOTCH1P46531 2555 aa7.55□□□□□ -1.2
DEPDC1-201ENST00000370966 ATP11AUNQ6ZP68 121 aa7.54□□□□□ -1.2
DEPDC1-201ENST00000370966 IGSF10Q6WRI0 2623 aa7.54□□□□□ -1.2
DEPDC1-201ENST00000370966 DSCR10P59022 87 aa7.53□□□□□ -1.2
DEPDC1-201ENST00000370966 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
DEPDC1-201ENST00000370966 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
DEPDC1-201ENST00000370966 SPANXA2-OT1Q8N9U9 137 aa7.52□□□□□ -1.21
DEPDC1-201ENST00000370966 CYSTM1Q9H1C7 97 aa7.52□□□□□ -1.21
DEPDC1-201ENST00000370966 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
DEPDC1-201ENST00000370966 OCR1Q9BZK8 76 aa7.51□□□□□ -1.21
DEPDC1-201ENST00000370966 NBEAL1Q6ZS30 2694 aa7.51□□□□□ -1.21
DEPDC1-201ENST00000370966 ANAPC11Q9NYG5 84 aa7.51□□□□□ -1.21
DEPDC1-201ENST00000370966 SETXQ7Z333 2677 aaKnown RBP7.5□□□□□ -1.21
DEPDC1-201ENST00000370966 FRYQ5TBA9 3013 aa7.49□□□□□ -1.21
DEPDC1-201ENST00000370966 UBR5O95071 2799 aaPredicted RBP7.48□□□□□ -1.21
DEPDC1-201ENST00000370966 UQCR11O14957 56 aa7.48□□□□□ -1.21
DEPDC1-201ENST00000370966 SPRR1AP35321 89 aa7.48□□□□□ -1.21
DEPDC1-201ENST00000370966 Q8NDZ9 215 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms