RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SMIM13P0DJ93 91 aa8.61□□□□□ -1.03
SSR4-204ENST00000370087 SEC61BP60468 96 aaKnown RBP8.61□□□□□ -1.03
SSR4-204ENST00000370087 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
SSR4-204ENST00000370087 SPRR4Q96PI1 79 aa8.6□□□□□ -1.03
SSR4-204ENST00000370087 MT1HP80294 61 aa8.59□□□□□ -1.03
SSR4-204ENST00000370087 JOSD1Q15040 202 aaPredicted RBP8.59□□□□□ -1.03
SSR4-204ENST00000370087 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
SSR4-204ENST00000370087 Q8NBF4 154 aa8.59□□□□□ -1.03
SSR4-204ENST00000370087 MIEN1Q9BRT3 115 aa8.59□□□□□ -1.03
SSR4-204ENST00000370087 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
SSR4-204ENST00000370087 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
SSR4-204ENST00000370087 A0A0J9YXY3 114 aa8.56□□□□□ -1.04
SSR4-204ENST00000370087 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
SSR4-204ENST00000370087 TIMM17BO60830 172 aa8.55□□□□□ -1.04
SSR4-204ENST00000370087 C4orf48Q5BLP8 95 aa8.55□□□□□ -1.04
SSR4-204ENST00000370087 BOD1L2Q8IYS8 172 aa8.55□□□□□ -1.04
SSR4-204ENST00000370087 ANKRD39Q53RE8 183 aa8.54□□□□□ -1.04
SSR4-204ENST00000370087 XP32Q5T750 250 aa8.53□□□□□ -1.04
SSR4-204ENST00000370087 COPS9Q8WXC6 57 aa8.53□□□□□ -1.04
SSR4-204ENST00000370087 PAM16Q9Y3D7 125 aa8.53□□□□□ -1.04
SSR4-204ENST00000370087 SMIM6P0DI80 62 aa8.52□□□□□ -1.05
SSR4-204ENST00000370087 S100A12P80511 92 aa8.52□□□□□ -1.05
SSR4-204ENST00000370087 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
SSR4-204ENST00000370087 LOC107984156A0A0G2JMH3 177 aa8.51□□□□□ -1.05
SSR4-204ENST00000370087 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
SSR4-204ENST00000370087 ARL17AQ8IVW1 177 aa8.51□□□□□ -1.05
SSR4-204ENST00000370087 Q8N377 158 aa8.51□□□□□ -1.05
SSR4-204ENST00000370087 SPINK1P00995 79 aa8.5□□□□□ -1.05
SSR4-204ENST00000370087 SPATA45Q537H7 98 aa8.5□□□□□ -1.05
SSR4-204ENST00000370087 TTTY13Q9BZ97 58 aa8.5□□□□□ -1.05
SSR4-204ENST00000370087 Q6ZVH6 145 aa8.49□□□□□ -1.05
SSR4-204ENST00000370087 C12orf57Q99622 126 aa8.49□□□□□ -1.05
SSR4-204ENST00000370087 NDUFC2O95298 119 aa8.48□□□□□ -1.05
SSR4-204ENST00000370087 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
SSR4-204ENST00000370087 ADAMTSL4-AS1Q5T5F5 129 aa8.48□□□□□ -1.05
SSR4-204ENST00000370087 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
SSR4-204ENST00000370087 SPANXB1Q9NS25 103 aaPredicted RBP8.48□□□□□ -1.05
SSR4-204ENST00000370087 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
SSR4-204ENST00000370087 NCR3O14931 201 aa8.47□□□□□ -1.05
SSR4-204ENST00000370087 NPC2P61916 151 aa8.47□□□□□ -1.05
SSR4-204ENST00000370087 CBY1Q9Y3M2 126 aa8.47□□□□□ -1.05
SSR4-204ENST00000370087 ZNF706Q9Y5V0 76 aaPredicted RBP8.47□□□□□ -1.05
SSR4-204ENST00000370087 CFC1BP0CG36 223 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 IFITM1P13164 125 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 LINC00308Q8TCZ7 52 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 LITAFQ99732 161 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 SPANXDQ9BXN6 97 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 SPANXCQ9NY87 97 aa8.46□□□□□ -1.06
SSR4-204ENST00000370087 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
SSR4-204ENST00000370087 LINC00518Q8N0U6 118 aa8.45□□□□□ -1.06
SSR4-204ENST00000370087 SMCR5Q8TEV8 140 aa8.45□□□□□ -1.06
SSR4-204ENST00000370087 PRO1933Q9H354 126 aa8.45□□□□□ -1.06
SSR4-204ENST00000370087 MOBPQ13875 183 aa8.44□□□□□ -1.06
SSR4-204ENST00000370087 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
SSR4-204ENST00000370087 C14orf144Q96I85 54 aa8.44□□□□□ -1.06
SSR4-204ENST00000370087 FLGP20930 4061 aaPredicted RBP8.44□□□□□ -1.06
SSR4-204ENST00000370087 PRYO14603 147 aa8.43□□□□□ -1.06
SSR4-204ENST00000370087 DDTP30046 118 aa8.43□□□□□ -1.06
SSR4-204ENST00000370087 COX8AP10176 69 aa8.42□□□□□ -1.06
SSR4-204ENST00000370087 SOSTDC1Q6X4U4 206 aa8.42□□□□□ -1.06
SSR4-204ENST00000370087 IGLV9-49A0A0B4J1Y8 123 aa8.41□□□□□ -1.06
SSR4-204ENST00000370087 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
SSR4-204ENST00000370087 KRTAP4-16G5E9R7 235 aaPredicted RBP8.41□□□□□ -1.06
SSR4-204ENST00000370087 SPRR1AP35321 89 aa8.41□□□□□ -1.06
SSR4-204ENST00000370087 RPS29P62273 56 aaKnown RBP8.41□□□□□ -1.06
SSR4-204ENST00000370087 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
SSR4-204ENST00000370087 DLEU1O43261 78 aa8.4□□□□□ -1.06
SSR4-204ENST00000370087 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
SSR4-204ENST00000370087 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SSR4-204ENST00000370087 SLC25A20O43772 301 aa8.39□□□□□ -1.07
SSR4-204ENST00000370087 ERC2-IT1O76042 136 aa8.39□□□□□ -1.07
SSR4-204ENST00000370087 GAGE2AQ6NT46 116 aa8.39□□□□□ -1.07
SSR4-204ENST00000370087 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
SSR4-204ENST00000370087 IGLV8-61A0A075B6I0 122 aa8.38□□□□□ -1.07
SSR4-204ENST00000370087 IGLV6-57P01721 117 aa8.38□□□□□ -1.07
SSR4-204ENST00000370087 HINT1P49773 126 aaPredicted RBP8.38□□□□□ -1.07
SSR4-204ENST00000370087 SLC25A34Q6PIV7 304 aa8.38□□□□□ -1.07
SSR4-204ENST00000370087 MUSTN1Q8IVN3 82 aa8.38□□□□□ -1.07
SSR4-204ENST00000370087 KRTAP9-7A8MTY7 169 aa8.37□□□□□ -1.07
SSR4-204ENST00000370087 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
SSR4-204ENST00000370087 HIST1H4GQ99525 98 aa8.37□□□□□ -1.07
SSR4-204ENST00000370087 TRAV23DV6A0A075B6W5 121 aa8.36□□□□□ -1.07
SSR4-204ENST00000370087 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
SSR4-204ENST00000370087 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
SSR4-204ENST00000370087 TSTD3H0UI37 97 aa8.34□□□□□ -1.07
SSR4-204ENST00000370087 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
SSR4-204ENST00000370087 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
SSR4-204ENST00000370087 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
SSR4-204ENST00000370087 A6NDN8 102 aa8.33□□□□□ -1.08
SSR4-204ENST00000370087 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
SSR4-204ENST00000370087 C2orf91Q6ZV80 131 aa8.33□□□□□ -1.08
SSR4-204ENST00000370087 B5MCH6 92 aa8.32□□□□□ -1.08
SSR4-204ENST00000370087 Q9BRP9 147 aa8.32□□□□□ -1.08
SSR4-204ENST00000370087 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
SSR4-204ENST00000370087 PCP4L1A6NKN8 68 aa8.31□□□□□ -1.08
SSR4-204ENST00000370087 M0R2T5 61 aa8.3□□□□□ -1.08
SSR4-204ENST00000370087 A4D1N5 150 aa8.29□□□□□ -1.08
SSR4-204ENST00000370087 Q6ZRX8 168 aa8.29□□□□□ -1.08
SSR4-204ENST00000370087 TAL2Q16559 108 aa8.28□□□□□ -1.08
SSR4-204ENST00000370087 C9orf153Q5TBE3 101 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms