RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 HIGD2AQ9BW72 106 aa12.36□□□□□ -0.43
CD58-201ENST00000369487 TRAV23DV6A0A075B6W5 121 aa12.35□□□□□ -0.43
CD58-201ENST00000369487 OR13C6PQ8NH95 151 aa12.33□□□□□ -0.44
CD58-201ENST00000369487 CRYGAP11844 174 aa12.32□□□□□ -0.44
CD58-201ENST00000369487 B5MCH6 92 aa12.31□□□□□ -0.44
CD58-201ENST00000369487 ZNF73O43830 326 aaPredicted RBP12.31□□□□□ -0.44
CD58-201ENST00000369487 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
CD58-201ENST00000369487 MUSTN1Q8IVN3 82 aa12.31□□□□□ -0.44
CD58-201ENST00000369487 JOSD1Q15040 202 aaPredicted RBP12.3□□□□□ -0.44
CD58-201ENST00000369487 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
CD58-201ENST00000369487 Q6ZRX8 168 aa12.29□□□□□ -0.44
CD58-201ENST00000369487 A0A087X002 238 aa12.28□□□□□ -0.44
CD58-201ENST00000369487 COX8AP10176 69 aa12.28□□□□□ -0.44
CD58-201ENST00000369487 HINT1P49773 126 aaPredicted RBP12.28□□□□□ -0.44
CD58-201ENST00000369487 TMA7Q9Y2S6 64 aaKnown RBP12.28□□□□□ -0.44
CD58-201ENST00000369487 SMCR5Q8TEV8 140 aa12.27□□□□□ -0.45
CD58-201ENST00000369487 ANAPC11Q9NYG5 84 aa12.27□□□□□ -0.45
CD58-201ENST00000369487 HMCN2Q8NDA2 5059 aa12.26□□□□□ -0.45
CD58-201ENST00000369487 SPRR4Q96PI1 79 aa12.26□□□□□ -0.45
CD58-201ENST00000369487 VAMP8Q9BV40 100 aa12.26□□□□□ -0.45
CD58-201ENST00000369487 DLEU1O43261 78 aa12.25□□□□□ -0.45
CD58-201ENST00000369487 PAM16Q9Y3D7 125 aa12.25□□□□□ -0.45
CD58-201ENST00000369487 SPATA45Q537H7 98 aa12.24□□□□□ -0.45
CD58-201ENST00000369487 TYMSOSQ8TAI1 123 aa12.24□□□□□ -0.45
CD58-201ENST00000369487 Q9BRP9 147 aa12.22□□□□□ -0.45
CD58-201ENST00000369487 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
CD58-201ENST00000369487 A6NDN8 102 aa12.21□□□□□ -0.45
CD58-201ENST00000369487 KRTAP13-2Q52LG2 175 aa12.21□□□□□ -0.45
CD58-201ENST00000369487 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
CD58-201ENST00000369487 HIST1H4GQ99525 98 aa12.19□□□□□ -0.46
CD58-201ENST00000369487 ERC2-IT1O76042 136 aa12.18□□□□□ -0.46
CD58-201ENST00000369487 C6orf99Q4VX62 202 aa12.18□□□□□ -0.46
CD58-201ENST00000369487 PYY3Q5JQD4 70 aa12.17□□□□□ -0.46
CD58-201ENST00000369487 SLC25A34Q6PIV7 304 aa12.17□□□□□ -0.46
CD58-201ENST00000369487 TRBV7-6A0A0J9YX20 115 aa12.16□□□□□ -0.46
CD58-201ENST00000369487 A4D1N5 150 aa12.16□□□□□ -0.46
CD58-201ENST00000369487 COX7BP24311 80 aa12.16□□□□□ -0.46
CD58-201ENST00000369487 ELOF1P60002 83 aaKnown RBP12.16□□□□□ -0.46
CD58-201ENST00000369487 LINC00483Q53H64 154 aa12.16□□□□□ -0.46
CD58-201ENST00000369487 DHRS4-AS1Q9P1J3 65 aa12.16□□□□□ -0.46
CD58-201ENST00000369487 GAGE2AQ6NT46 116 aa12.15□□□□□ -0.46
CD58-201ENST00000369487 HIGD1BQ9P298 99 aa12.15□□□□□ -0.46
CD58-201ENST00000369487 A0A1B0GWB2 263 aa12.12□□□□□ -0.47
CD58-201ENST00000369487 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
CD58-201ENST00000369487 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
CD58-201ENST00000369487 C2orf91Q6ZV80 131 aa12.09□□□□□ -0.47
CD58-201ENST00000369487 SMIM11BQ8TCY0 68 aa12.09□□□□□ -0.47
CD58-201ENST00000369487 TSPAN13O95857 204 aa12.06□□□□□ -0.48
CD58-201ENST00000369487 CTAG1AP78358 180 aa12.06□□□□□ -0.48
CD58-201ENST00000369487 TAL2Q16559 108 aa12.06□□□□□ -0.48
CD58-201ENST00000369487 ST20-AS1Q8NBB2 130 aa12.06□□□□□ -0.48
CD58-201ENST00000369487 C12orf57Q99622 126 aa12.05□□□□□ -0.48
CD58-201ENST00000369487 VAMP3Q15836 100 aa12.04□□□□□ -0.48
CD58-201ENST00000369487 SPAG11AQ6PDA7 123 aa12.03□□□□□ -0.48
CD58-201ENST00000369487 NHP2Q9NX24 153 aaKnown RBP12.03□□□□□ -0.48
CD58-201ENST00000369487 IGLV9-49A0A0B4J1Y8 123 aa12.02□□□□□ -0.49
CD58-201ENST00000369487 SPRR1BP22528 89 aa12.02□□□□□ -0.49
CD58-201ENST00000369487 MOBPQ13875 183 aa12.01□□□□□ -0.49
CD58-201ENST00000369487 Q8NBF4 154 aa12.01□□□□□ -0.49
CD58-201ENST00000369487 TMEM238LA0A1B0GVL6 79 aa12□□□□□ -0.49
CD58-201ENST00000369487 A6NJY4 79 aa12□□□□□ -0.49
CD58-201ENST00000369487 C4orf48Q5BLP8 95 aa12□□□□□ -0.49
CD58-201ENST00000369487 SSBP3-AS1Q7Z2R9 100 aa12□□□□□ -0.49
CD58-201ENST00000369487 CEND1Q8N111 149 aa12□□□□□ -0.49
CD58-201ENST00000369487 RAB37Q96AX2 223 aa12□□□□□ -0.49
CD58-201ENST00000369487 A0A0B4J2C4 111 aa11.99□□□□□ -0.49
CD58-201ENST00000369487 CFC1BP0CG36 223 aa11.99□□□□□ -0.49
CD58-201ENST00000369487 CFC1P0CG37 223 aa11.99□□□□□ -0.49
CD58-201ENST00000369487 SLC25A20O43772 301 aa11.98□□□□□ -0.49
CD58-201ENST00000369487 C9orf153Q5TBE3 101 aa11.97□□□□□ -0.49
CD58-201ENST00000369487 UQCR10Q9UDW1 63 aa11.97□□□□□ -0.49
CD58-201ENST00000369487 TEX49A0A1B0GTD5 131 aa11.96□□□□□ -0.49
CD58-201ENST00000369487 BVES-AS1Q5T3Y7 98 aa11.96□□□□□ -0.49
CD58-201ENST00000369487 LAMTOR3Q9UHA4 124 aa11.96□□□□□ -0.49
CD58-201ENST00000369487 HSD52Q0P140 79 aa11.95□□□□□ -0.5
CD58-201ENST00000369487 PRR4Q16378 134 aa11.95□□□□□ -0.5
CD58-201ENST00000369487 DEFB105AQ8NG35 78 aa11.95□□□□□ -0.5
CD58-201ENST00000369487 LINC00575Q6W349 94 aa11.94□□□□□ -0.5
CD58-201ENST00000369487 IGLV5-48A0A075B6I7 105 aa11.93□□□□□ -0.5
CD58-201ENST00000369487 H7C2G1 150 aa11.93□□□□□ -0.5
CD58-201ENST00000369487 SPINK1P00995 79 aa11.93□□□□□ -0.5
CD58-201ENST00000369487 FXYD2P54710 66 aa11.92□□□□□ -0.5
CD58-201ENST00000369487 UBR4Q5T4S7 5183 aa11.91□□□□□ -0.5
CD58-201ENST00000369487 LRP2P98164 4655 aa11.9□□□□□ -0.5
CD58-201ENST00000369487 hADV29S1A0JD25 119 aa11.9□□□□□ -0.5
CD58-201ENST00000369487 LINC01547P58512 204 aaPredicted RBP11.9□□□□□ -0.5
CD58-201ENST00000369487 PRO1854Q9UHT4 67 aa11.9□□□□□ -0.5
CD58-201ENST00000369487 RPS29P62273 56 aaKnown RBP11.88□□□□□ -0.51
CD58-201ENST00000369487 Q1RN00 199 aa11.88□□□□□ -0.51
CD58-201ENST00000369487 SMIM6P0DI80 62 aa11.87□□□□□ -0.51
CD58-201ENST00000369487 RETNLBQ9BQ08 111 aa11.86□□□□□ -0.51
CD58-201ENST00000369487 H0YGX0 51 aa11.85□□□□□ -0.51
CD58-201ENST00000369487 Q6ZQY7 126 aa11.85□□□□□ -0.51
CD58-201ENST00000369487 SMIM29Q86T20 159 aa11.85□□□□□ -0.51
CD58-201ENST00000369487 Q8N377 158 aa11.85□□□□□ -0.51
CD58-201ENST00000369487 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.84□□□□□ -0.51
CD58-201ENST00000369487 SNCGO76070 127 aa11.83□□□□□ -0.52
CD58-201ENST00000369487 PRO1933Q9H354 126 aa11.82□□□□□ -0.52
CD58-201ENST00000369487 LPAP08519 4548 aa11.8□□□□□ -0.52
CD58-201ENST00000369487 F8WEM9 126 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms