RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 Q6ZRP5 223 aa6.72□□□□□ -1.33
TPM3-209ENST00000368527 SMIM20Q8N5G0 67 aa6.72□□□□□ -1.33
TPM3-209ENST00000368527 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
TPM3-209ENST00000368527 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
TPM3-209ENST00000368527 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
TPM3-209ENST00000368527 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.34
TPM3-209ENST00000368527 NBEAL1Q6ZS30 2694 aa6.7□□□□□ -1.34
TPM3-209ENST00000368527 LOC107984640A0A0U1RRK4 108 aa6.7□□□□□ -1.34
TPM3-209ENST00000368527 USP17L23D6RBM5 183 aa6.7□□□□□ -1.34
TPM3-209ENST00000368527 CRYGAP11844 174 aa6.7□□□□□ -1.34
TPM3-209ENST00000368527 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
TPM3-209ENST00000368527 ANK2Q01484 3957 aa6.67□□□□□ -1.34
TPM3-209ENST00000368527 K7EIL1 84 aa6.67□□□□□ -1.34
TPM3-209ENST00000368527 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
TPM3-209ENST00000368527 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
TPM3-209ENST00000368527 SPRR1AP35321 89 aa6.66□□□□□ -1.34
TPM3-209ENST00000368527 Q6ZVQ6 151 aa6.66□□□□□ -1.34
TPM3-209ENST00000368527 IGLV1-50A0A075B6I6 118 aa6.65□□□□□ -1.34
TPM3-209ENST00000368527 LINC01547P58512 204 aaPredicted RBP6.65□□□□□ -1.34
TPM3-209ENST00000368527 Q6ZRX8 168 aa6.65□□□□□ -1.34
TPM3-209ENST00000368527 SS18L2Q9UHA2 77 aa6.65□□□□□ -1.34
TPM3-209ENST00000368527 IGLV5-48A0A075B6I7 105 aa6.63□□□□□ -1.35
TPM3-209ENST00000368527 CNBPP62633 177 aaKnown RBP6.63□□□□□ -1.35
TPM3-209ENST00000368527 HAMPP81172 84 aa6.63□□□□□ -1.35
TPM3-209ENST00000368527 SERTAD4-AS1Q5TG53 156 aa6.63□□□□□ -1.35
TPM3-209ENST00000368527 TRAV7A0A075B6U4 112 aa6.62□□□□□ -1.35
TPM3-209ENST00000368527 KRTAP4-16G5E9R7 235 aaPredicted RBP6.62□□□□□ -1.35
TPM3-209ENST00000368527 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.35
TPM3-209ENST00000368527 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
TPM3-209ENST00000368527 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
TPM3-209ENST00000368527 DNAH3Q8TD57 4116 aa6.61□□□□□ -1.35
TPM3-209ENST00000368527 A0A087WVE0 104 aa6.61□□□□□ -1.35
TPM3-209ENST00000368527 TMEM258P61165 79 aa6.61□□□□□ -1.35
TPM3-209ENST00000368527 C16orf90A8MZG2 172 aa6.6□□□□□ -1.35
TPM3-209ENST00000368527 FAM19A1Q7Z5A9 133 aa6.6□□□□□ -1.35
TPM3-209ENST00000368527 UBE2DNLQ8IWF7 75 aa6.6□□□□□ -1.35
TPM3-209ENST00000368527 TRRAPQ9Y4A5 3859 aa6.59□□□□□ -1.35
TPM3-209ENST00000368527 PSCAO43653 123 aa6.59□□□□□ -1.35
TPM3-209ENST00000368527 NREPQ16612 68 aa6.59□□□□□ -1.35
TPM3-209ENST00000368527 Q8N377 158 aa6.59□□□□□ -1.35
TPM3-209ENST00000368527 B9D2Q9BPU9 175 aa6.59□□□□□ -1.35
TPM3-209ENST00000368527 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
TPM3-209ENST00000368527 RPS28P62857 69 aaKnown RBP6.58□□□□□ -1.36
TPM3-209ENST00000368527 REG3GQ6UW15 175 aa6.58□□□□□ -1.36
TPM3-209ENST00000368527 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
TPM3-209ENST00000368527 LINC00474Q9P2X8 69 aa6.57□□□□□ -1.36
TPM3-209ENST00000368527 NUPR2A6NF83 97 aa6.56□□□□□ -1.36
TPM3-209ENST00000368527 F8WEM9 126 aa6.56□□□□□ -1.36
TPM3-209ENST00000368527 ERC2-IT1O76042 136 aa6.56□□□□□ -1.36
TPM3-209ENST00000368527 APLNQ9ULZ1 77 aa6.56□□□□□ -1.36
TPM3-209ENST00000368527 M0R2N4 97 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 NDUFC1O43677 76 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 PRB2P02812 416 aaPredicted RBP6.55□□□□□ -1.36
TPM3-209ENST00000368527 UBE2BP63146 152 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 TNP2Q05952 138 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 CASC10Q5T4H9 136 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
TPM3-209ENST00000368527 Q9BRP9 147 aa6.55□□□□□ -1.36
TPM3-209ENST00000368527 H0Y9J4 135 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 J3KT08 172 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 BPY2O14599 106 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 Q8NBF4 154 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 DEFB105AQ8NG35 78 aa6.54□□□□□ -1.36
TPM3-209ENST00000368527 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
TPM3-209ENST00000368527 FAM168BA1KXE4 195 aa6.53□□□□□ -1.36
TPM3-209ENST00000368527 SPRR4Q96PI1 79 aa6.53□□□□□ -1.36
TPM3-209ENST00000368527 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
TPM3-209ENST00000368527 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
TPM3-209ENST00000368527 MGAM2Q2M2H8 2515 aa6.51□□□□□ -1.37
TPM3-209ENST00000368527 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
TPM3-209ENST00000368527 KLKP1Q107X0 134 aa6.51□□□□□ -1.37
TPM3-209ENST00000368527 A0A096LNI7 61 aa6.5□□□□□ -1.37
TPM3-209ENST00000368527 PKD1L1Q8TDX9 2849 aa6.49□□□□□ -1.37
TPM3-209ENST00000368527 ATP5EP56381 51 aaPredicted RBP6.49□□□□□ -1.37
TPM3-209ENST00000368527 C9orf163Q8N9P6 203 aa6.49□□□□□ -1.37
TPM3-209ENST00000368527 NBDYA0A0U1RRE5 68 aa6.48□□□□□ -1.37
TPM3-209ENST00000368527 A0A1W2PNM2 257 aa6.48□□□□□ -1.37
TPM3-209ENST00000368527 IGKV4-1P06312 121 aa6.48□□□□□ -1.37
TPM3-209ENST00000368527 C20orf197Q8N268 126 aa6.48□□□□□ -1.37
TPM3-209ENST00000368527 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
TPM3-209ENST00000368527 NOTCH1P46531 2555 aa6.47□□□□□ -1.37
TPM3-209ENST00000368527 SPRR1BP22528 89 aa6.47□□□□□ -1.37
TPM3-209ENST00000368527 C3orf84H3BNL1 204 aa6.46□□□□□ -1.38
TPM3-209ENST00000368527 ST20-AS1Q8NBB2 130 aa6.46□□□□□ -1.38
TPM3-209ENST00000368527 IGKV2-24A0A0C4DH68 120 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 SCXQ7RTU7 201 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
TPM3-209ENST00000368527 FAM236DA0A1B0GTK5 79 aa6.44□□□□□ -1.38
TPM3-209ENST00000368527 LRCOL1A6NCL2 159 aa6.44□□□□□ -1.38
TPM3-209ENST00000368527 FAM236CP0DP71 79 aa6.44□□□□□ -1.38
TPM3-209ENST00000368527 HUWE1Q7Z6Z7 4374 aaKnown RBP6.44□□□□□ -1.38
TPM3-209ENST00000368527 DNAH1Q9P2D7 4330 aa6.43□□□□□ -1.38
TPM3-209ENST00000368527 MEGF8Q7Z7M0 2845 aa6.43□□□□□ -1.38
TPM3-209ENST00000368527 UBE2AP49459 152 aa6.43□□□□□ -1.38
TPM3-209ENST00000368527 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
TPM3-209ENST00000368527 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms