RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 DPM2O94777 84 aa8.9□□□□□ -0.98
CKS1B-202ENST00000368436 TRGC2P03986 189 aa8.9□□□□□ -0.98
CKS1B-202ENST00000368436 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
CKS1B-202ENST00000368436 S100A7L2Q5SY68 101 aa8.9□□□□□ -0.98
CKS1B-202ENST00000368436 TRAV23DV6A0A075B6W5 121 aa8.89□□□□□ -0.99
CKS1B-202ENST00000368436 HERVK_113P61574 105 aa8.89□□□□□ -0.99
CKS1B-202ENST00000368436 JOSD1Q15040 202 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-202ENST00000368436 XP32Q5T750 250 aa8.89□□□□□ -0.99
CKS1B-202ENST00000368436 LGALS3P17931 250 aaKnown RBP8.88□□□□□ -0.99
CKS1B-202ENST00000368436 SOSTDC1Q6X4U4 206 aa8.88□□□□□ -0.99
CKS1B-202ENST00000368436 HSPB8Q9UJY1 196 aa8.88□□□□□ -0.99
CKS1B-202ENST00000368436 EIF4EBP3O60516 100 aaPredicted RBP8.87□□□□□ -0.99
CKS1B-202ENST00000368436 IGKCP01834 107 aa8.87□□□□□ -0.99
CKS1B-202ENST00000368436 PMCHL2Q9BQD1 86 aa8.87□□□□□ -0.99
CKS1B-202ENST00000368436 C5orf52A6NGY3 159 aa8.86□□□□□ -0.99
CKS1B-202ENST00000368436 ZNF73O43830 326 aaPredicted RBP8.86□□□□□ -0.99
CKS1B-202ENST00000368436 ADAMTSL4-AS1Q5T5F5 129 aa8.86□□□□□ -0.99
CKS1B-202ENST00000368436 C9orf153Q5TBE3 101 aa8.86□□□□□ -0.99
CKS1B-202ENST00000368436 A0A0J9YXY3 114 aa8.85□□□□□ -0.99
CKS1B-202ENST00000368436 FABP4P15090 132 aa8.85□□□□□ -0.99
CKS1B-202ENST00000368436 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
CKS1B-202ENST00000368436 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
CKS1B-202ENST00000368436 NPC2P61916 151 aa8.83□□□□□ -1
CKS1B-202ENST00000368436 E9PLD3 99 aa8.82□□□□□ -1
CKS1B-202ENST00000368436 SPRR1BP22528 89 aa8.81□□□□□ -1
CKS1B-202ENST00000368436 CBY1Q9Y3M2 126 aa8.81□□□□□ -1
CKS1B-202ENST00000368436 HINT1P49773 126 aaPredicted RBP8.8□□□□□ -1
CKS1B-202ENST00000368436 LINC00308Q8TCZ7 52 aa8.78□□□□□ -1
CKS1B-202ENST00000368436 LITAFQ99732 161 aa8.78□□□□□ -1
CKS1B-202ENST00000368436 SPANXCQ9NY87 97 aa8.78□□□□□ -1
CKS1B-202ENST00000368436 COLCA2A8K830 154 aa8.76□□□□□ -1.01
CKS1B-202ENST00000368436 TIMM17BO60830 172 aa8.76□□□□□ -1.01
CKS1B-202ENST00000368436 GHRHP01286 108 aa8.76□□□□□ -1.01
CKS1B-202ENST00000368436 SLC25A34Q6PIV7 304 aa8.76□□□□□ -1.01
CKS1B-202ENST00000368436 DHRS4-AS1Q9P1J3 65 aa8.76□□□□□ -1.01
CKS1B-202ENST00000368436 KRTAP19-2Q3LHN2 52 aa8.75□□□□□ -1.01
CKS1B-202ENST00000368436 OR13C6PQ8NH95 151 aa8.75□□□□□ -1.01
CKS1B-202ENST00000368436 LIMD2Q9BT23 127 aa8.75□□□□□ -1.01
CKS1B-202ENST00000368436 SYS1-DBNDD2H3BUS1 97 aa8.73□□□□□ -1.01
CKS1B-202ENST00000368436 HRCT1Q6UXD1 115 aa8.73□□□□□ -1.01
CKS1B-202ENST00000368436 SPANXDQ9BXN6 97 aa8.73□□□□□ -1.01
CKS1B-202ENST00000368436 LAMTOR3Q9UHA4 124 aa8.73□□□□□ -1.01
CKS1B-202ENST00000368436 TMEM238LA0A1B0GVL6 79 aa8.72□□□□□ -1.01
CKS1B-202ENST00000368436 ELOF1P60002 83 aaKnown RBP8.71□□□□□ -1.02
CKS1B-202ENST00000368436 COX7BP24311 80 aa8.7□□□□□ -1.02
CKS1B-202ENST00000368436 CD164Q04900 197 aa8.7□□□□□ -1.02
CKS1B-202ENST00000368436 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
CKS1B-202ENST00000368436 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
CKS1B-202ENST00000368436 C6orf99Q4VX62 202 aa8.69□□□□□ -1.02
CKS1B-202ENST00000368436 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
CKS1B-202ENST00000368436 IGLV8-61A0A075B6I0 122 aa8.68□□□□□ -1.02
CKS1B-202ENST00000368436 C9orf92A6NGG3 77 aa8.68□□□□□ -1.02
CKS1B-202ENST00000368436 ZNF815PA8K554 130 aa8.68□□□□□ -1.02
CKS1B-202ENST00000368436 MT1HP80294 61 aa8.67□□□□□ -1.02
CKS1B-202ENST00000368436 TAL2Q16559 108 aa8.67□□□□□ -1.02
CKS1B-202ENST00000368436 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
CKS1B-202ENST00000368436 PRO1933Q9H354 126 aa8.67□□□□□ -1.02
CKS1B-202ENST00000368436 TEX49A0A1B0GTD5 131 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST2H2BEQ16778 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 Q1RN00 199 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.66□□□□□ -1.02
CKS1B-202ENST00000368436 SLC7A5P1Q8MH63 180 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 DEFB105AQ8NG35 78 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BHQ93079 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BNQ99877 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 HIST1H2BMQ99879 126 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 TTTY13Q9BZ97 58 aa8.66□□□□□ -1.02
CKS1B-202ENST00000368436 TRBV7-6A0A0J9YX20 115 aa8.65□□□□□ -1.02
CKS1B-202ENST00000368436 Q5XG85 94 aa8.65□□□□□ -1.02
CKS1B-202ENST00000368436 SMIM29Q86T20 159 aa8.65□□□□□ -1.02
CKS1B-202ENST00000368436 CRCT1Q9UGL9 99 aa8.65□□□□□ -1.02
CKS1B-202ENST00000368436 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.03
CKS1B-202ENST00000368436 H7C2G1 150 aa8.63□□□□□ -1.03
CKS1B-202ENST00000368436 AKR1D1P51857 326 aa8.62□□□□□ -1.03
CKS1B-202ENST00000368436 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
CKS1B-202ENST00000368436 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
CKS1B-202ENST00000368436 CFC1BP0CG36 223 aa8.61□□□□□ -1.03
CKS1B-202ENST00000368436 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
CKS1B-202ENST00000368436 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
CKS1B-202ENST00000368436 IFITM1P13164 125 aa8.58□□□□□ -1.04
CKS1B-202ENST00000368436 COPS9Q8WXC6 57 aa8.58□□□□□ -1.04
CKS1B-202ENST00000368436 A0A0G2JQZ4 141 aa8.57□□□□□ -1.04
CKS1B-202ENST00000368436 SCGB1D4Q6XE38 83 aa8.57□□□□□ -1.04
CKS1B-202ENST00000368436 A6NDN8 102 aa8.56□□□□□ -1.04
CKS1B-202ENST00000368436 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
CKS1B-202ENST00000368436 Q6ZVH6 145 aa8.56□□□□□ -1.04
CKS1B-202ENST00000368436 A4D1N5 150 aa8.55□□□□□ -1.04
CKS1B-202ENST00000368436 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
CKS1B-202ENST00000368436 KRTDAPP60985 99 aa8.54□□□□□ -1.04
CKS1B-202ENST00000368436 COA6Q5JTJ3 125 aaKnown RBP8.54□□□□□ -1.04
CKS1B-202ENST00000368436 MUSTN1Q8IVN3 82 aa8.54□□□□□ -1.04
CKS1B-202ENST00000368436 KRTAP10-6P60371 365 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-202ENST00000368436 SMIM11BQ8TCY0 68 aa8.51□□□□□ -1.05
CKS1B-202ENST00000368436 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms