RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.53
H3F3A-204ENST00000366816 TRAV23DV6A0A075B6W5 121 aa11.7□□□□□ -0.54
H3F3A-204ENST00000366816 SCGB1D1O95968 90 aa11.7□□□□□ -0.54
H3F3A-204ENST00000366816 FAM229BQ4G0N7 80 aa11.7□□□□□ -0.54
H3F3A-204ENST00000366816 OR13C6PQ8NH95 151 aa11.7□□□□□ -0.54
H3F3A-204ENST00000366816 SPRR4Q96PI1 79 aa11.69□□□□□ -0.54
H3F3A-204ENST00000366816 HSBP1L1C9JCN9 74 aa11.68□□□□□ -0.54
H3F3A-204ENST00000366816 ZNF73O43830 326 aaPredicted RBP11.67□□□□□ -0.54
H3F3A-204ENST00000366816 ERC2-IT1O76042 136 aa11.67□□□□□ -0.54
H3F3A-204ENST00000366816 TSPAN13O95857 204 aa11.67□□□□□ -0.54
H3F3A-204ENST00000366816 Q9BRP9 147 aa11.67□□□□□ -0.54
H3F3A-204ENST00000366816 Q6ZRX8 168 aa11.66□□□□□ -0.54
H3F3A-204ENST00000366816 MUSTN1Q8IVN3 82 aa11.66□□□□□ -0.54
H3F3A-204ENST00000366816 PPDPFQ9H3Y8 114 aa11.66□□□□□ -0.54
H3F3A-204ENST00000366816 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.54
H3F3A-204ENST00000366816 ZNF706Q9Y5V0 76 aaPredicted RBP11.64□□□□□ -0.55
H3F3A-204ENST00000366816 IFITM1P13164 125 aa11.63□□□□□ -0.55
H3F3A-204ENST00000366816 LINC00518Q8N0U6 118 aa11.63□□□□□ -0.55
H3F3A-204ENST00000366816 Q6ZVH6 145 aa11.62□□□□□ -0.55
H3F3A-204ENST00000366816 GAGE2AQ6NT46 116 aa11.61□□□□□ -0.55
H3F3A-204ENST00000366816 COPS9Q8WXC6 57 aa11.6□□□□□ -0.55
H3F3A-204ENST00000366816 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
H3F3A-204ENST00000366816 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
H3F3A-204ENST00000366816 HINT1P49773 126 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-204ENST00000366816 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
H3F3A-204ENST00000366816 LINC00304Q8N9R0 145 aa11.58□□□□□ -0.56
H3F3A-204ENST00000366816 A6NDN8 102 aa11.57□□□□□ -0.56
H3F3A-204ENST00000366816 LRP2P98164 4655 aa11.57□□□□□ -0.56
H3F3A-204ENST00000366816 LINC00483Q53H64 154 aa11.56□□□□□ -0.56
H3F3A-204ENST00000366816 C6orf99Q4VX62 202 aa11.55□□□□□ -0.56
H3F3A-204ENST00000366816 ST20-AS1Q8NBB2 130 aa11.55□□□□□ -0.56
H3F3A-204ENST00000366816 PRR4Q16378 134 aa11.54□□□□□ -0.56
H3F3A-204ENST00000366816 COX8AP10176 69 aa11.53□□□□□ -0.56
H3F3A-204ENST00000366816 COX7BP24311 80 aa11.52□□□□□ -0.57
H3F3A-204ENST00000366816 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
H3F3A-204ENST00000366816 LPAP08519 4548 aa11.51□□□□□ -0.57
H3F3A-204ENST00000366816 C14orf144Q96I85 54 aa11.51□□□□□ -0.57
H3F3A-204ENST00000366816 TMA7Q9Y2S6 64 aaKnown RBP11.51□□□□□ -0.57
H3F3A-204ENST00000366816 IGLV9-49A0A0B4J1Y8 123 aa11.5□□□□□ -0.57
H3F3A-204ENST00000366816 ELOF1P60002 83 aaKnown RBP11.5□□□□□ -0.57
H3F3A-204ENST00000366816 Q8NBF4 154 aa11.5□□□□□ -0.57
H3F3A-204ENST00000366816 TRAV13-2A0A0B4J235 113 aa11.49□□□□□ -0.57
H3F3A-204ENST00000366816 A4D1N5 150 aa11.49□□□□□ -0.57
H3F3A-204ENST00000366816 SPATA45Q537H7 98 aa11.49□□□□□ -0.57
H3F3A-204ENST00000366816 RETNLBQ9BQ08 111 aa11.49□□□□□ -0.57
H3F3A-204ENST00000366816 DHRS4-AS1Q9P1J3 65 aa11.49□□□□□ -0.57
H3F3A-204ENST00000366816 MOBPQ13875 183 aa11.48□□□□□ -0.57
H3F3A-204ENST00000366816 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
H3F3A-204ENST00000366816 VAMP8Q9BV40 100 aa11.47□□□□□ -0.57
H3F3A-204ENST00000366816 DLEU1O43261 78 aa11.46□□□□□ -0.57
H3F3A-204ENST00000366816 SMIM11BQ8TCY0 68 aa11.46□□□□□ -0.57
H3F3A-204ENST00000366816 C12orf57Q99622 126 aa11.45□□□□□ -0.58
H3F3A-204ENST00000366816 TRBV7-6A0A0J9YX20 115 aa11.44□□□□□ -0.58
H3F3A-204ENST00000366816 C4orf48Q5BLP8 95 aa11.43□□□□□ -0.58
H3F3A-204ENST00000366816 A0A1B0GWB2 263 aa11.42□□□□□ -0.58
H3F3A-204ENST00000366816 SPAG11AQ6PDA7 123 aa11.42□□□□□ -0.58
H3F3A-204ENST00000366816 DEFB105AQ8NG35 78 aa11.42□□□□□ -0.58
H3F3A-204ENST00000366816 PYY3Q5JQD4 70 aa11.41□□□□□ -0.58
H3F3A-204ENST00000366816 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
H3F3A-204ENST00000366816 SLC25A34Q6PIV7 304 aa11.4□□□□□ -0.58
H3F3A-204ENST00000366816 SSBP3-AS1Q7Z2R9 100 aa11.4□□□□□ -0.58
H3F3A-204ENST00000366816 SPRR1BP22528 89 aa11.39□□□□□ -0.59
H3F3A-204ENST00000366816 TAL2Q16559 108 aa11.39□□□□□ -0.59
H3F3A-204ENST00000366816 C2orf91Q6ZV80 131 aa11.39□□□□□ -0.59
H3F3A-204ENST00000366816 CTAG1AP78358 180 aa11.37□□□□□ -0.59
H3F3A-204ENST00000366816 HIGD1BQ9P298 99 aa11.37□□□□□ -0.59
H3F3A-204ENST00000366816 SPINK1P00995 79 aa11.34□□□□□ -0.59
H3F3A-204ENST00000366816 Q1RN00 199 aa11.34□□□□□ -0.59
H3F3A-204ENST00000366816 TEX49A0A1B0GTD5 131 aa11.33□□□□□ -0.6
H3F3A-204ENST00000366816 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
H3F3A-204ENST00000366816 VAMP3Q15836 100 aa11.33□□□□□ -0.6
H3F3A-204ENST00000366816 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
H3F3A-204ENST00000366816 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
H3F3A-204ENST00000366816 CFC1P0CG37 223 aa11.32□□□□□ -0.6
H3F3A-204ENST00000366816 IGLV7-46A0A075B6I9 117 aa11.31□□□□□ -0.6
H3F3A-204ENST00000366816 H7C2G1 150 aa11.31□□□□□ -0.6
H3F3A-204ENST00000366816 LINC00575Q6W349 94 aa11.3□□□□□ -0.6
H3F3A-204ENST00000366816 SMIM29Q86T20 159 aa11.3□□□□□ -0.6
H3F3A-204ENST00000366816 NHP2Q9NX24 153 aaKnown RBP11.3□□□□□ -0.6
H3F3A-204ENST00000366816 RNF213Q63HN8 5207 aa11.29□□□□□ -0.6
H3F3A-204ENST00000366816 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
H3F3A-204ENST00000366816 SLC25A20O43772 301 aa11.28□□□□□ -0.6
H3F3A-204ENST00000366816 HRCT1Q6UXD1 115 aa11.28□□□□□ -0.6
H3F3A-204ENST00000366816 CEND1Q8N111 149 aa11.28□□□□□ -0.6
H3F3A-204ENST00000366816 RAB37Q96AX2 223 aa11.28□□□□□ -0.6
H3F3A-204ENST00000366816 Q8N377 158 aa11.27□□□□□ -0.61
H3F3A-204ENST00000366816 hADV29S1A0JD25 119 aa11.25□□□□□ -0.61
H3F3A-204ENST00000366816 A0A0B4J2C4 111 aa11.24□□□□□ -0.61
H3F3A-204ENST00000366816 FXYD2P54710 66 aa11.24□□□□□ -0.61
H3F3A-204ENST00000366816 RPS29P62273 56 aaKnown RBP11.24□□□□□ -0.61
H3F3A-204ENST00000366816 A0A0G2JQZ4 141 aa11.23□□□□□ -0.61
H3F3A-204ENST00000366816 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
H3F3A-204ENST00000366816 Q6ZQY7 126 aa11.23□□□□□ -0.61
H3F3A-204ENST00000366816 TPRXLQ17RH7 258 aa11.21□□□□□ -0.61
H3F3A-204ENST00000366816 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.61
H3F3A-204ENST00000366816 PRO1933Q9H354 126 aa11.21□□□□□ -0.61
H3F3A-204ENST00000366816 CDIP1Q9H305 208 aa11.19□□□□□ -0.62
H3F3A-204ENST00000366816 PRO1854Q9UHT4 67 aa11.19□□□□□ -0.62
H3F3A-204ENST00000366816 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
H3F3A-204ENST00000366816 A6NJY4 79 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms