RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 OXTP01178 125 aa4.78□□□□□ -1.64
YBX3-204ENST00000366290 HERVK_113P61574 105 aa4.78□□□□□ -1.64
YBX3-204ENST00000366290 MAJINQ3KP22 176 aa4.78□□□□□ -1.64
YBX3-204ENST00000366290 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
YBX3-204ENST00000366290 A0A1W2PNN7 141 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 NDUFC2-KCTD14E9PQ53 114 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 HNRNPA3P51991 378 aaKnown RBP4.77□□□□□ -1.65
YBX3-204ENST00000366290 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
YBX3-204ENST00000366290 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
YBX3-204ENST00000366290 DPH3Q96FX2 82 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 NDUFA12Q9UI09 145 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 TNXBP22105 4242 aa4.77□□□□□ -1.65
YBX3-204ENST00000366290 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
YBX3-204ENST00000366290 ERG28Q9UKR5 140 aa4.76□□□□□ -1.65
YBX3-204ENST00000366290 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
YBX3-204ENST00000366290 LGALS3P17931 250 aaKnown RBP4.75□□□□□ -1.65
YBX3-204ENST00000366290 JOSD1Q15040 202 aaPredicted RBP4.75□□□□□ -1.65
YBX3-204ENST00000366290 SFTA2Q6UW10 78 aa4.75□□□□□ -1.65
YBX3-204ENST00000366290 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
YBX3-204ENST00000366290 MYMXA0A1B0GTQ4 84 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 SMIM13P0DJ93 91 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 PFN2P35080 140 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 NMUP48645 174 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 AKR1D1P51857 326 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 PRR3P79522 188 aaKnown RBP4.74□□□□□ -1.65
YBX3-204ENST00000366290 COX17Q14061 63 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 PYY3Q5JQD4 70 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 MTURNQ8N3F0 131 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 Q8NDZ9 215 aa4.74□□□□□ -1.65
YBX3-204ENST00000366290 A0A0J9YXY3 114 aa4.73□□□□□ -1.65
YBX3-204ENST00000366290 CEND1Q8N111 149 aa4.73□□□□□ -1.65
YBX3-204ENST00000366290 SND1-IT1Q9HBX3 110 aa4.73□□□□□ -1.65
YBX3-204ENST00000366290 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 LINC00158P58513 81 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 MEIG1Q5JSS6 88 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 KRTAP11-1Q8IUC1 163 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 MIR7-3HGQ8N6C7 128 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 TP73-AS1Q9UF72 201 aa4.72□□□□□ -1.65
YBX3-204ENST00000366290 KRTAP1-4P0C5Y4 121 aa4.71□□□□□ -1.66
YBX3-204ENST00000366290 SOSTDC1Q6X4U4 206 aa4.71□□□□□ -1.66
YBX3-204ENST00000366290 PHF5AQ7RTV0 110 aaKnown RBP4.71□□□□□ -1.66
YBX3-204ENST00000366290 FAM19A5Q7Z5A7 132 aaPredicted RBP4.71□□□□□ -1.66
YBX3-204ENST00000366290 DAND5Q8N907 189 aa4.71□□□□□ -1.66
YBX3-204ENST00000366290 LOC107984156A0A0G2JMH3 177 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 HSBP1L1C9JCN9 74 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 TIMM17BO60830 172 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 MT1HL1P0DM35 61 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 SPINK6Q6UWN8 80 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 ARL17AQ8IVW1 177 aa4.7□□□□□ -1.66
YBX3-204ENST00000366290 LOC105371267A0A1B0GV96 52 aa4.69□□□□□ -1.66
YBX3-204ENST00000366290 LINC00587B1AMM8 73 aa4.69□□□□□ -1.66
YBX3-204ENST00000366290 M0QXV9 152 aa4.69□□□□□ -1.66
YBX3-204ENST00000366290 C22orf24Q9Y442 160 aa4.69□□□□□ -1.66
YBX3-204ENST00000366290 COX8AP10176 69 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 SPATA45Q537H7 98 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 BOD1L2Q8IYS8 172 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 LINC01600Q96MT4 127 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 VAMP8Q9BV40 100 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 PSORS1C2Q9UIG4 136 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 RNF213Q63HN8 5207 aa4.68□□□□□ -1.66
YBX3-204ENST00000366290 DLEU1O43261 78 aa4.67□□□□□ -1.66
YBX3-204ENST00000366290 MRPL55Q7Z7F7 128 aaKnown RBP4.67□□□□□ -1.66
YBX3-204ENST00000366290 C14orf144Q96I85 54 aa4.67□□□□□ -1.66
YBX3-204ENST00000366290 LINC00167Q96N53 147 aa4.67□□□□□ -1.66
YBX3-204ENST00000366290 SPANXDQ9BXN6 97 aa4.67□□□□□ -1.66
YBX3-204ENST00000366290 SPANXCQ9NY87 97 aa4.67□□□□□ -1.66
YBX3-204ENST00000366290 NPC2P61916 151 aa4.66□□□□□ -1.66
YBX3-204ENST00000366290 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
YBX3-204ENST00000366290 SCGB1D4Q6XE38 83 aa4.66□□□□□ -1.66
YBX3-204ENST00000366290 LINC00308Q8TCZ7 52 aa4.66□□□□□ -1.66
YBX3-204ENST00000366290 TMEM238C9JI98 176 aa4.65□□□□□ -1.67
YBX3-204ENST00000366290 C2orf91Q6ZV80 131 aa4.65□□□□□ -1.67
YBX3-204ENST00000366290 SPANXB1Q9NS25 103 aaPredicted RBP4.65□□□□□ -1.67
YBX3-204ENST00000366290 LRP2P98164 4655 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 IGKV2-28A0A075B6P5 120 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 NCR3O14931 201 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 NDUFC2O95298 119 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 IGKV2D-28P01615 120 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 IGLV7-43P04211 117 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 KRTAP10-8P60410 259 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 C1orf137Q5JT78 98 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 NKAPP1Q8N9T2 125 aa4.64□□□□□ -1.67
YBX3-204ENST00000366290 IGLV1-50A0A075B6I6 118 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 TRBV10-2A0A0K0K1G8 114 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 A8MU10 97 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 M0R378 163 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 SMIM6P0DI80 62 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 UBE2BP63146 152 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 SLC25A34Q6PIV7 304 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 Q6ZVH6 145 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 MUSTN1Q8IVN3 82 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 MIEN1Q9BRT3 115 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 HIGD1BQ9P298 99 aa4.63□□□□□ -1.67
YBX3-204ENST00000366290 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
YBX3-204ENST00000366290 IFITM1P13164 125 aa4.62□□□□□ -1.67
YBX3-204ENST00000366290 IGLV6-57P01721 117 aa4.61□□□□□ -1.67
YBX3-204ENST00000366290 KRTAP13-1Q8IUC0 172 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms