RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 REV3LO60673 3130 aa9.16□□□□□ -0.94
CTR9-201ENST00000361367 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
CTR9-201ENST00000361367 ST20-AS1Q8NBB2 130 aa9.15□□□□□ -0.94
CTR9-201ENST00000361367 NBEAL1Q6ZS30 2694 aa9.15□□□□□ -0.94
CTR9-201ENST00000361367 Q6Q795 121 aa9.15□□□□□ -0.94
CTR9-201ENST00000361367 EYSQ5T1H1 3165 aa9.15□□□□□ -0.94
CTR9-201ENST00000361367 CRYGAP11844 174 aa9.14□□□□□ -0.95
CTR9-201ENST00000361367 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
CTR9-201ENST00000361367 FAM236DA0A1B0GTK5 79 aa9.14□□□□□ -0.95
CTR9-201ENST00000361367 FAM236CP0DP71 79 aa9.14□□□□□ -0.95
CTR9-201ENST00000361367 SEC61GP60059 68 aa9.14□□□□□ -0.95
CTR9-201ENST00000361367 COX7CP15954 63 aa9.14□□□□□ -0.95
CTR9-201ENST00000361367 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
CTR9-201ENST00000361367 DMXL1Q9Y485 3027 aa9.13□□□□□ -0.95
CTR9-201ENST00000361367 Q8N9L7 120 aa9.13□□□□□ -0.95
CTR9-201ENST00000361367 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 NDUFC1O43677 76 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 PRR4Q16378 134 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 IGLV1-50A0A075B6I6 118 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 LINC00476Q8WZB0 136 aa9.12□□□□□ -0.95
CTR9-201ENST00000361367 LINC00208Q96KT6 92 aa9.11□□□□□ -0.95
CTR9-201ENST00000361367 ZZEF1O43149 2961 aa9.11□□□□□ -0.95
CTR9-201ENST00000361367 PRO0461Q9UI25 63 aa9.11□□□□□ -0.95
CTR9-201ENST00000361367 TRAV7A0A075B6U4 112 aa9.1□□□□□ -0.95
CTR9-201ENST00000361367 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
CTR9-201ENST00000361367 Q8NBF4 154 aa9.09□□□□□ -0.95
CTR9-201ENST00000361367 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
CTR9-201ENST00000361367 C9orf129Q5T035 196 aaKnown RBP9.09□□□□□ -0.95
CTR9-201ENST00000361367 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
CTR9-201ENST00000361367 SPTBN5Q9NRC6 3674 aaKnown RBP9.08□□□□□ -0.96
CTR9-201ENST00000361367 KALRNO60229 2985 aa9.08□□□□□ -0.96
CTR9-201ENST00000361367 NBEAQ8NFP9 2946 aa9.08□□□□□ -0.96
CTR9-201ENST00000361367 TYMSOSQ8TAI1 123 aa9.07□□□□□ -0.96
CTR9-201ENST00000361367 TLX1NBP0CAT3 122 aa9.07□□□□□ -0.96
CTR9-201ENST00000361367 HCG22E2RYF7 251 aa9.07□□□□□ -0.96
CTR9-201ENST00000361367 CXCL6P80162 114 aa9.07□□□□□ -0.96
CTR9-201ENST00000361367 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
CTR9-201ENST00000361367 LINC00528Q8N1L1 170 aa9.06□□□□□ -0.96
CTR9-201ENST00000361367 HIVEP1P15822 2718 aa9.06□□□□□ -0.96
CTR9-201ENST00000361367 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
CTR9-201ENST00000361367 A0A1B0GW54 56 aa9.05□□□□□ -0.96
CTR9-201ENST00000361367 Q6ZQT0 140 aa9.05□□□□□ -0.96
CTR9-201ENST00000361367 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
CTR9-201ENST00000361367 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
CTR9-201ENST00000361367 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
CTR9-201ENST00000361367 CDIP1Q9H305 208 aa9.04□□□□□ -0.96
CTR9-201ENST00000361367 CNBPP62633 177 aaKnown RBP9.03□□□□□ -0.96
CTR9-201ENST00000361367 LOC110117498A0A087WWA1 95 aa9.03□□□□□ -0.96
CTR9-201ENST00000361367 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
CTR9-201ENST00000361367 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.97
CTR9-201ENST00000361367 LRBAP50851 2863 aa9.01□□□□□ -0.97
CTR9-201ENST00000361367 PLA2G2DQ9UNK4 145 aa9.01□□□□□ -0.97
CTR9-201ENST00000361367 MPLKIPQ8TAP9 179 aa9□□□□□ -0.97
CTR9-201ENST00000361367 A0A1W2PNN7 141 aa9□□□□□ -0.97
CTR9-201ENST00000361367 APCP25054 2843 aa8.99□□□□□ -0.97
CTR9-201ENST00000361367 H0Y9P7 68 aa8.99□□□□□ -0.97
CTR9-201ENST00000361367 ZNF861PO60384 105 aa8.99□□□□□ -0.97
CTR9-201ENST00000361367 PCOTHQ58A44 107 aa8.98□□□□□ -0.97
CTR9-201ENST00000361367 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
CTR9-201ENST00000361367 SPEGQ15772 3267 aa8.98□□□□□ -0.97
CTR9-201ENST00000361367 SMR3BP02814 79 aaPredicted RBP8.98□□□□□ -0.97
CTR9-201ENST00000361367 TRBV7-4A0A0J9YYF1 115 aa8.96□□□□□ -0.97
CTR9-201ENST00000361367 TNP2Q05952 138 aa8.96□□□□□ -0.98
CTR9-201ENST00000361367 SMIM29Q86T20 159 aa8.96□□□□□ -0.98
CTR9-201ENST00000361367 hDV103S1A0JD37 113 aa8.95□□□□□ -0.98
CTR9-201ENST00000361367 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
CTR9-201ENST00000361367 FAM104AQ969W3 186 aa8.95□□□□□ -0.98
CTR9-201ENST00000361367 PSORS1C2Q9UIG4 136 aa8.93□□□□□ -0.98
CTR9-201ENST00000361367 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
CTR9-201ENST00000361367 IGKV2-30P06310 120 aa8.92□□□□□ -0.98
CTR9-201ENST00000361367 Q8N377 158 aa8.92□□□□□ -0.98
CTR9-201ENST00000361367 ZANQ9Y493 2812 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 IGLV7-43P04211 117 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 SERP1Q9Y6X1 66 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.98
CTR9-201ENST00000361367 LINC00313P59037 77 aa8.89□□□□□ -0.99
CTR9-201ENST00000361367 SSBP3-AS1Q7Z2R9 100 aa8.89□□□□□ -0.99
CTR9-201ENST00000361367 PRR15LQ9BU68 103 aa8.89□□□□□ -0.99
CTR9-201ENST00000361367 TP53AIP1Q9HCN2 124 aa8.89□□□□□ -0.99
CTR9-201ENST00000361367 V9GYY9 64 aa8.89□□□□□ -0.99
CTR9-201ENST00000361367 J3QL48 77 aa8.88□□□□□ -0.99
CTR9-201ENST00000361367 ANAPC11Q9NYG5 84 aa8.88□□□□□ -0.99
CTR9-201ENST00000361367 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
CTR9-201ENST00000361367 USP34Q70CQ2 3546 aa8.87□□□□□ -0.99
CTR9-201ENST00000361367 CFAP47Q6ZTR5 3102 aa8.87□□□□□ -0.99
CTR9-201ENST00000361367 IGLV5-37A0A075B6J1 123 aa8.86□□□□□ -0.99
CTR9-201ENST00000361367 LOC400499M0QZD8 3231 aa8.86□□□□□ -0.99
CTR9-201ENST00000361367 BRK1Q8WUW1 75 aa8.86□□□□□ -0.99
CTR9-201ENST00000361367 A0A0G2JQZ4 141 aa8.84□□□□□ -0.99
CTR9-201ENST00000361367 SPINK1P00995 79 aa8.84□□□□□ -0.99
CTR9-201ENST00000361367 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
CTR9-201ENST00000361367 A8MWP4 228 aa8.83□□□□□ -1
CTR9-201ENST00000361367 SPRR4Q96PI1 79 aa8.83□□□□□ -1
CTR9-201ENST00000361367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.82□□□□□ -1
CTR9-201ENST00000361367 Q96NJ1 140 aa8.81□□□□□ -1
CTR9-201ENST00000361367 TENM4Q6N022 2769 aa8.81□□□□□ -1
CTR9-201ENST00000361367 K7EQZ3 153 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms