RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SZT2Q5T011 3432 aa10.66□□□□□ -0.7
CLSTN1-201ENST00000361311 H3BPC8 53 aa10.65□□□□□ -0.7
CLSTN1-201ENST00000361311 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.7
CLSTN1-201ENST00000361311 FLNAP21333 2647 aaKnown RBP10.65□□□□□ -0.7
CLSTN1-201ENST00000361311 ITPR3Q14573 2671 aa10.64□□□□□ -0.71
CLSTN1-201ENST00000361311 TRAV22A0A0B4J277 110 aa10.64□□□□□ -0.71
CLSTN1-201ENST00000361311 SPEGQ15772 3267 aa10.63□□□□□ -0.71
CLSTN1-201ENST00000361311 SPAG11AQ6PDA7 123 aa10.63□□□□□ -0.71
CLSTN1-201ENST00000361311 SETXQ7Z333 2677 aaKnown RBP10.63□□□□□ -0.71
CLSTN1-201ENST00000361311 KALRNO60229 2985 aa10.63□□□□□ -0.71
CLSTN1-201ENST00000361311 RPL37AP61513 92 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-201ENST00000361311 Q8N377 158 aa10.62□□□□□ -0.71
CLSTN1-201ENST00000361311 ZNF706Q9Y5V0 76 aaPredicted RBP10.62□□□□□ -0.71
CLSTN1-201ENST00000361311 TEP1Q99973 2627 aaKnown RBP10.62□□□□□ -0.71
CLSTN1-201ENST00000361311 AKAP13Q12802 2813 aa10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 FP248Q71RG6 208 aaPredicted RBP10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 Q8NAQ8 132 aa10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 PRR34Q9NV39 138 aa10.61□□□□□ -0.71
CLSTN1-201ENST00000361311 OCR1Q9BZK8 76 aa10.59□□□□□ -0.71
CLSTN1-201ENST00000361311 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
CLSTN1-201ENST00000361311 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
CLSTN1-201ENST00000361311 LINC00612Q8N6U2 182 aa10.58□□□□□ -0.72
CLSTN1-201ENST00000361311 TP53AIP1Q9HCN2 124 aa10.56□□□□□ -0.72
CLSTN1-201ENST00000361311 H3BNG1 76 aa10.55□□□□□ -0.72
CLSTN1-201ENST00000361311 CYP4F30PQ9H0H9 118 aa10.55□□□□□ -0.72
CLSTN1-201ENST00000361311 CHD6Q8TD26 2715 aa10.55□□□□□ -0.72
CLSTN1-201ENST00000361311 FAM168BA1KXE4 195 aa10.53□□□□□ -0.72
CLSTN1-201ENST00000361311 CD164Q04900 197 aa10.53□□□□□ -0.72
CLSTN1-201ENST00000361311 A0A1W2PNM2 257 aa10.53□□□□□ -0.72
CLSTN1-201ENST00000361311 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
CLSTN1-201ENST00000361311 COA5Q86WW8 74 aa10.52□□□□□ -0.73
CLSTN1-201ENST00000361311 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
CLSTN1-201ENST00000361311 ADGRG4Q8IZF6 3080 aa10.5□□□□□ -0.73
CLSTN1-201ENST00000361311 C15orf56Q8N910 161 aa10.5□□□□□ -0.73
CLSTN1-201ENST00000361311 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
CLSTN1-201ENST00000361311 FAM229BQ4G0N7 80 aa10.5□□□□□ -0.73
CLSTN1-201ENST00000361311 CR1P17927 2039 aa10.48□□□□□ -0.73
CLSTN1-201ENST00000361311 IGFL1Q6UW32 110 aa10.48□□□□□ -0.73
CLSTN1-201ENST00000361311 A0A0G2JQZ4 141 aa10.48□□□□□ -0.73
CLSTN1-201ENST00000361311 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
CLSTN1-201ENST00000361311 Q8NDZ9 215 aa10.48□□□□□ -0.73
CLSTN1-201ENST00000361311 A8MWP4 228 aa10.47□□□□□ -0.73
CLSTN1-201ENST00000361311 IGLV5-48A0A075B6I7 105 aa10.46□□□□□ -0.73
CLSTN1-201ENST00000361311 Q1T7F1 81 aa10.46□□□□□ -0.73
CLSTN1-201ENST00000361311 GCN1Q92616 2671 aaKnown RBP10.46□□□□□ -0.74
CLSTN1-201ENST00000361311 LOC101927531A0A1B0GV80 90 aa10.46□□□□□ -0.74
CLSTN1-201ENST00000361311 K7ERS5 55 aa10.46□□□□□ -0.74
CLSTN1-201ENST00000361311 TACC2O95359 2948 aa10.46□□□□□ -0.74
CLSTN1-201ENST00000361311 ATP11AUNQ6ZP68 121 aa10.45□□□□□ -0.74
CLSTN1-201ENST00000361311 CIRBP-AS1Q8TBR5 109 aa10.45□□□□□ -0.74
CLSTN1-201ENST00000361311 BOD1L1Q8NFC6 3051 aa10.45□□□□□ -0.74
CLSTN1-201ENST00000361311 KRTAP24-1Q3LI83 254 aa10.45□□□□□ -0.74
CLSTN1-201ENST00000361311 RETNLBQ9BQ08 111 aa10.45□□□□□ -0.74
CLSTN1-201ENST00000361311 LY6G6CO95867 125 aa10.44□□□□□ -0.74
CLSTN1-201ENST00000361311 KTN1-AS1Q86SY8 53 aa10.43□□□□□ -0.74
CLSTN1-201ENST00000361311 A0A1B0GU69 56 aa10.43□□□□□ -0.74
CLSTN1-201ENST00000361311 ACYP2P14621 99 aa10.42□□□□□ -0.74
CLSTN1-201ENST00000361311 STAB1Q9NY15 2570 aa10.41□□□□□ -0.74
CLSTN1-201ENST00000361311 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
CLSTN1-201ENST00000361311 DNAH10OSP0CZ25 163 aa10.38□□□□□ -0.75
CLSTN1-201ENST00000361311 MOBPQ13875 183 aa10.38□□□□□ -0.75
CLSTN1-201ENST00000361311 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
CLSTN1-201ENST00000361311 DSCR10P59022 87 aa10.37□□□□□ -0.75
CLSTN1-201ENST00000361311 SPANXA2-OT1Q8N9U9 137 aa10.37□□□□□ -0.75
CLSTN1-201ENST00000361311 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
CLSTN1-201ENST00000361311 SPINK1P00995 79 aa10.36□□□□□ -0.75
CLSTN1-201ENST00000361311 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
CLSTN1-201ENST00000361311 NBEAL2Q6ZNJ1 2754 aa10.35□□□□□ -0.75
CLSTN1-201ENST00000361311 UNC79Q9P2D8 2635 aa10.35□□□□□ -0.75
CLSTN1-201ENST00000361311 BAHCC1Q9P281 2608 aa10.34□□□□□ -0.75
CLSTN1-201ENST00000361311 PLA2G2DQ9UNK4 145 aa10.34□□□□□ -0.75
CLSTN1-201ENST00000361311 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
CLSTN1-201ENST00000361311 C7orf65Q6ZTY9 151 aa10.33□□□□□ -0.76
CLSTN1-201ENST00000361311 TLX1NBP0CAT3 122 aa10.32□□□□□ -0.76
CLSTN1-201ENST00000361311 COL6A3P12111 3177 aa10.32□□□□□ -0.76
CLSTN1-201ENST00000361311 NUPR2A6NF83 97 aa10.32□□□□□ -0.76
CLSTN1-201ENST00000361311 C8orf87E5RJ46 101 aa10.32□□□□□ -0.76
CLSTN1-201ENST00000361311 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
CLSTN1-201ENST00000361311 COL6A5A8TX70 2615 aa10.31□□□□□ -0.76
CLSTN1-201ENST00000361311 LRBAP50851 2863 aa10.31□□□□□ -0.76
CLSTN1-201ENST00000361311 CFAP47Q6ZTR5 3102 aa10.3□□□□□ -0.76
CLSTN1-201ENST00000361311 MRPL34Q9BQ48 92 aaKnown RBP10.29□□□□□ -0.76
CLSTN1-201ENST00000361311 IGKV2D-30A0A075B6S6 120 aa10.29□□□□□ -0.76
CLSTN1-201ENST00000361311 IGKV2-30P06310 120 aa10.29□□□□□ -0.76
CLSTN1-201ENST00000361311 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
CLSTN1-201ENST00000361311 REV3LO60673 3130 aa10.27□□□□□ -0.77
CLSTN1-201ENST00000361311 CDC42SE1Q9NRR8 79 aa10.27□□□□□ -0.77
CLSTN1-201ENST00000361311 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
CLSTN1-201ENST00000361311 KRTAP10-3P60369 221 aa10.24□□□□□ -0.77
CLSTN1-201ENST00000361311 LCA10Q71F78 164 aa10.24□□□□□ -0.77
CLSTN1-201ENST00000361311 DMXL2Q8TDJ6 3036 aa10.24□□□□□ -0.77
CLSTN1-201ENST00000361311 Q8N9P0 234 aaPredicted RBP10.23□□□□□ -0.77
CLSTN1-201ENST00000361311 ZZEF1O43149 2961 aa10.22□□□□□ -0.77
CLSTN1-201ENST00000361311 ITPR1Q14643 2758 aa10.22□□□□□ -0.77
CLSTN1-201ENST00000361311 ATMQ13315 3056 aa10.22□□□□□ -0.77
CLSTN1-201ENST00000361311 MYO15AQ9UKN7 3530 aa10.21□□□□□ -0.77
CLSTN1-201ENST00000361311 CASC10Q5T4H9 136 aa10.21□□□□□ -0.77
CLSTN1-201ENST00000361311 IGLV8-61A0A075B6I0 122 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms