RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
GTF3C2-202ENST00000359541 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
GTF3C2-202ENST00000359541 USP17L23D6RBM5 183 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 H3BS24 57 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 SYCNQ0VAF6 134 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 TRBV7-6A0A0J9YX20 115 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 Q6ZQY7 126 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 Q6ZRU5 148 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 UPK3BQ9BT76 320 aa6.23□□□□□ -1.41
GTF3C2-202ENST00000359541 HIVEP1P15822 2718 aa6.22□□□□□ -1.41
GTF3C2-202ENST00000359541 NREPQ16612 68 aa6.22□□□□□ -1.41
GTF3C2-202ENST00000359541 C9orf129Q5T035 196 aaKnown RBP6.22□□□□□ -1.41
GTF3C2-202ENST00000359541 A0A087WVE0 104 aa6.21□□□□□ -1.41
GTF3C2-202ENST00000359541 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
GTF3C2-202ENST00000359541 DNAH10OSP0CZ25 163 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 ETDCA0A1B0GVM5 59 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 C15orf56Q8N910 161 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 Q8NDZ9 215 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 CYSTM1Q9H1C7 97 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 VPREB1P12018 145 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 HIGD2AQ9BW72 106 aa6.2□□□□□ -1.42
GTF3C2-202ENST00000359541 OXTP01178 125 aa6.19□□□□□ -1.42
GTF3C2-202ENST00000359541 LY6G6CO95867 125 aa6.19□□□□□ -1.42
GTF3C2-202ENST00000359541 ELOF1P60002 83 aaKnown RBP6.19□□□□□ -1.42
GTF3C2-202ENST00000359541 LOC110117498A0A087WWA1 95 aa6.19□□□□□ -1.42
GTF3C2-202ENST00000359541 NDUFC1O43677 76 aa6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 KRTAP26-1Q6PEX3 210 aa6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 TRRAPQ9Y4A5 3859 aa6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 Q5XG85 94 aa6.18□□□□□ -1.42
GTF3C2-202ENST00000359541 ANK2Q01484 3957 aa6.17□□□□□ -1.42
GTF3C2-202ENST00000359541 DNAH1Q9P2D7 4330 aa6.17□□□□□ -1.42
GTF3C2-202ENST00000359541 VWFP04275 2813 aa6.17□□□□□ -1.42
GTF3C2-202ENST00000359541 Q6ZQT0 140 aa6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 BCE1O60756 84 aa6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 CDK2AP2O75956 126 aa6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 ATP5EP56381 51 aaPredicted RBP6.16□□□□□ -1.42
GTF3C2-202ENST00000359541 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
GTF3C2-202ENST00000359541 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.42
GTF3C2-202ENST00000359541 Q6ZRP5 223 aa6.15□□□□□ -1.43
GTF3C2-202ENST00000359541 BPY2O14599 106 aa6.15□□□□□ -1.43
GTF3C2-202ENST00000359541 DMBT1Q9UGM3 2413 aaPredicted RBP6.15□□□□□ -1.43
GTF3C2-202ENST00000359541 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
GTF3C2-202ENST00000359541 CRYGAP11844 174 aa6.14□□□□□ -1.43
GTF3C2-202ENST00000359541 TM2D3Q9BRN9 247 aa6.14□□□□□ -1.43
GTF3C2-202ENST00000359541 LINC00588Q9Y4M8 146 aa6.14□□□□□ -1.43
GTF3C2-202ENST00000359541 TLX1NBP0CAT3 122 aa6.14□□□□□ -1.43
GTF3C2-202ENST00000359541 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
GTF3C2-202ENST00000359541 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
GTF3C2-202ENST00000359541 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
GTF3C2-202ENST00000359541 UBE2AP49459 152 aa6.13□□□□□ -1.43
GTF3C2-202ENST00000359541 RPL37AP8A6NKH3 93 aa6.12□□□□□ -1.43
GTF3C2-202ENST00000359541 PRYO14603 147 aa6.12□□□□□ -1.43
GTF3C2-202ENST00000359541 KCNQ1DNQ9H478 68 aa6.11□□□□□ -1.43
GTF3C2-202ENST00000359541 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
GTF3C2-202ENST00000359541 Q6ZVQ6 151 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 NDUFS5O43920 106 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 TRBV7-4A0A0J9YYF1 115 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 CXCL6P80162 114 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 TNP2Q05952 138 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 LYSTQ99698 3801 aa6.1□□□□□ -1.43
GTF3C2-202ENST00000359541 K7EIL1 84 aa6.09□□□□□ -1.43
GTF3C2-202ENST00000359541 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
GTF3C2-202ENST00000359541 LINC01547P58512 204 aaPredicted RBP6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 MP68P56378 58 aa6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 C14orf177Q52M58 125 aa6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 SCXQ7RTU7 201 aa6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 FAM19A1Q7Z5A9 133 aa6.08□□□□□ -1.44
GTF3C2-202ENST00000359541 CMYA5Q8N3K9 4069 aa6.07□□□□□ -1.44
GTF3C2-202ENST00000359541 Q6ZRX8 168 aa6.07□□□□□ -1.44
GTF3C2-202ENST00000359541 PSPHP1O15172 72 aa6.06□□□□□ -1.44
GTF3C2-202ENST00000359541 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
GTF3C2-202ENST00000359541 A0A1B0GW54 56 aa6.06□□□□□ -1.44
GTF3C2-202ENST00000359541 CSMD3Q7Z407 3707 aa6.05□□□□□ -1.44
GTF3C2-202ENST00000359541 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
GTF3C2-202ENST00000359541 NDUFB1O75438 58 aa6.03□□□□□ -1.44
GTF3C2-202ENST00000359541 REG3GQ6UW15 175 aa6.03□□□□□ -1.44
GTF3C2-202ENST00000359541 CD164Q04900 197 aa6.03□□□□□ -1.44
GTF3C2-202ENST00000359541 CASC10Q5T4H9 136 aa6.03□□□□□ -1.44
GTF3C2-202ENST00000359541 SPINK6Q6UWN8 80 aa6.03□□□□□ -1.44
GTF3C2-202ENST00000359541 C3orf84H3BNL1 204 aa6.02□□□□□ -1.45
GTF3C2-202ENST00000359541 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
GTF3C2-202ENST00000359541 FAM168BA1KXE4 195 aa6.01□□□□□ -1.45
GTF3C2-202ENST00000359541 SPRR1AP35321 89 aa6.01□□□□□ -1.45
GTF3C2-202ENST00000359541 Q8N377 158 aa6.01□□□□□ -1.45
GTF3C2-202ENST00000359541 IGLV5-48A0A075B6I7 105 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 C16orf90A8MZG2 172 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 C1orf137Q5JT78 98 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 H0Y9J4 135 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 PRR26Q8N8Z3 221 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 MDFIQ99750 246 aa6□□□□□ -1.45
GTF3C2-202ENST00000359541 CNBPP62633 177 aaKnown RBP5.99□□□□□ -1.45
GTF3C2-202ENST00000359541 DNAH3Q8TD57 4116 aa5.99□□□□□ -1.45
GTF3C2-202ENST00000359541 DNHD1Q96M86 4753 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms