RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 IGIPA6NJ69 53 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 H7C423 109 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 DNAL4O96015 105 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 SPATA45Q537H7 98 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 TTTY13Q9BZ97 58 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 ANAPC11Q9NYG5 84 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PLNP26678 52 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 C9orf129Q5T035 196 aaKnown RBP2.44□□□□□ -2.02
SMC1B-201ENST00000357450 Q8N8P6 123 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 COPS9Q8WXC6 57 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 IFI27L1Q96BM0 104 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 CDC42SE2Q9NRR3 84 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 A0A1B0GUV1 79 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LINC01549A6NIU2 74 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LEPROTO15243 131 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PIK3CD-AS1Q5SR53 167 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 MRPL55Q7Z7F7 128 aaKnown RBP2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LAMTOR3Q9UHA4 124 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PSORS1C2Q9UIG4 136 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SMIM13P0DJ93 91 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SLC25A34Q6PIV7 304 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00304Q8N9R0 145 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 PLEKHB2Q96CS7 222 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 ERG28Q9UKR5 140 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV7-46A0A075B6I9 117 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 FAM168BA1KXE4 195 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 SYS1-DBNDD2H3BUS1 97 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 K7EMI3 77 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00612Q8N6U2 182 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 OBSCN-AS1Q96MR7 158 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 E9PLD3 99 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 COX8AP10176 69 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 UBE2V1Q13404 147 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 UQCR10Q9UDW1 63 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 SIGMAR1Q99720 223 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 DPM2O94777 84 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 HIST1H4AP62805 103 aaKnown RBP2.41□□□□□ -2.02
SMC1B-201ENST00000357450 MOBPQ13875 183 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV4-3A0A075B6K6 122 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 FXYD2P54710 66 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 C10orf25Q5T742 122 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 PTH2Q96A98 100 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SPANXB1Q9NS25 103 aaPredicted RBP2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SS18L2Q9UHA2 77 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 TRBV30A0A0K0K1B3 111 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 H3BUT2 72 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 NDUFS5O43920 106 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00167Q96N53 147 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 TRBV27A0A0K0K1C4 114 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 MRPL35Q9NZE8 188 aaKnown RBP2.4□□□□□ -2.03
SMC1B-201ENST00000357450 IGKCP01834 107 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 SLPIP03973 132 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 MTURNQ8N3F0 131 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 COX6CP09669 75 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 LINC01547P58512 204 aaPredicted RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 C6orf48Q9UBA6 75 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 GVQW2A0A096LPI5 108 aaPredicted RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 M0R378 163 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 TCL1BO95988 128 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 GHRHP01286 108 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 C15orf56Q8N910 161 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 NHP2Q9NX24 153 aaKnown RBP2.38□□□□□ -2.03
SMC1B-201ENST00000357450 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 SPCS1Q9Y6A9 102 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 HERC1Q15751 4861 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 J3QQQ9 107 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 ZNF861PO60384 105 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 Q8IZM0 81 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 COX7BP24311 80 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 OCIAD2Q56VL3 154 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 C11orf86A6NJI1 115 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
SMC1B-201ENST00000357450 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 KRTAP26-1Q6PEX3 210 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 CHCHD1Q96BP2 118 aaKnown RBP2.37□□□□□ -2.03
SMC1B-201ENST00000357450 PRR34Q9NV39 138 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms