RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 IGIPA6NJ69 53 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 H7C423 109 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 DNAL4O96015 105 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 SPATA45Q537H7 98 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 NTM-AS1Q6ZSK4 140 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 TTTY13Q9BZ97 58 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 ANAPC11Q9NYG5 84 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PLNP26678 52 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 C9orf129Q5T035 196 aaKnown RBP2.44□□□□□ -2.02
SMC1B-201ENST00000357450 Q8N8P6 123 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 COPS9Q8WXC6 57 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 IFI27L1Q96BM0 104 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 CDC42SE2Q9NRR3 84 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 A0A1B0GUV1 79 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LINC01549A6NIU2 74 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LEPROTO15243 131 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PIK3CD-AS1Q5SR53 167 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 MRPL55Q7Z7F7 128 aaKnown RBP2.44□□□□□ -2.02
SMC1B-201ENST00000357450 LAMTOR3Q9UHA4 124 aa2.44□□□□□ -2.02
SMC1B-201ENST00000357450 PSORS1C2Q9UIG4 136 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 NDUFC2-KCTD14E9PQ53 114 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SMIM13P0DJ93 91 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SLC25A34Q6PIV7 304 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 SFTA2Q6UW10 78 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 MIR7-3HGQ8N6C7 128 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00304Q8N9R0 145 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 PLEKHB2Q96CS7 222 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 ERG28Q9UKR5 140 aa2.43□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV7-46A0A075B6I9 117 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 FAM168BA1KXE4 195 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 SYS1-DBNDD2H3BUS1 97 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 K7EMI3 77 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00612Q8N6U2 182 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 OBSCN-AS1Q96MR7 158 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 E9PLD3 99 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 COX8AP10176 69 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 UBE2V1Q13404 147 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 UQCR10Q9UDW1 63 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 HIST1H4GQ99525 98 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 SIGMAR1Q99720 223 aa2.42□□□□□ -2.02
SMC1B-201ENST00000357450 DPM2O94777 84 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 LOC107984156A0A0G2JMH3 177 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 HIST1H4AP62805 103 aaKnown RBP2.41□□□□□ -2.02
SMC1B-201ENST00000357450 MOBPQ13875 183 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 ARL17AQ8IVW1 177 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV4-3A0A075B6K6 122 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 FXYD2P54710 66 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 C10orf25Q5T742 122 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 PTH2Q96A98 100 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SPANXB1Q9NS25 103 aaPredicted RBP2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SS18L2Q9UHA2 77 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 TRBV30A0A0K0K1B3 111 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 IGLV7-43P04211 117 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 SND1-IT1Q9HBX3 110 aa2.41□□□□□ -2.02
SMC1B-201ENST00000357450 H3BUT2 72 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 NDUFS5O43920 106 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 POLR2KP53803 58 aaKnown RBP2.4□□□□□ -2.02
SMC1B-201ENST00000357450 LINC00167Q96N53 147 aa2.4□□□□□ -2.02
SMC1B-201ENST00000357450 TRBV27A0A0K0K1C4 114 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 MRPL35Q9NZE8 188 aaKnown RBP2.4□□□□□ -2.03
SMC1B-201ENST00000357450 IGKCP01834 107 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 SLPIP03973 132 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 SMCR5Q8TEV8 140 aa2.4□□□□□ -2.03
SMC1B-201ENST00000357450 A0A1W2PNN7 141 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 MTURNQ8N3F0 131 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 COX6CP09669 75 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 LINC01547P58512 204 aaPredicted RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 PRR3P79522 188 aaKnown RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 C6orf48Q9UBA6 75 aa2.39□□□□□ -2.03
SMC1B-201ENST00000357450 GVQW2A0A096LPI5 108 aaPredicted RBP2.39□□□□□ -2.03
SMC1B-201ENST00000357450 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 IGLV5-45A0A087WSX0 123 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 M0R378 163 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 TCL1BO95988 128 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 GHRHP01286 108 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 C15orf56Q8N910 161 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 NHP2Q9NX24 153 aaKnown RBP2.38□□□□□ -2.03
SMC1B-201ENST00000357450 HIGD1BQ9P298 99 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 SPCS1Q9Y6A9 102 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 HERC1Q15751 4861 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 TRBV6-5A0A0K0K1A5 114 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 J3QQQ9 107 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 ZNF861PO60384 105 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 Q8IZM0 81 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 SMIM20Q8N5G0 67 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 BIRC6Q9NR09 4857 aa2.38□□□□□ -2.03
SMC1B-201ENST00000357450 COX7BP24311 80 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 OCIAD2Q56VL3 154 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 C11orf86A6NJI1 115 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
SMC1B-201ENST00000357450 SOSTDC1Q6X4U4 206 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 KRTAP26-1Q6PEX3 210 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 CHCHD1Q96BP2 118 aaKnown RBP2.37□□□□□ -2.03
SMC1B-201ENST00000357450 PRR34Q9NV39 138 aa2.37□□□□□ -2.03
SMC1B-201ENST00000357450 A0A1B0GVY2 172 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms