RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 LOC107984156A0A0G2JMH3 177 aa11.03□□□□□ -0.64
PDLIM7-202ENST00000355841 C1orf137Q5JT78 98 aa11.03□□□□□ -0.64
PDLIM7-202ENST00000355841 ARL17AQ8IVW1 177 aa11.03□□□□□ -0.64
PDLIM7-202ENST00000355841 LINC00308Q8TCZ7 52 aa11.03□□□□□ -0.64
PDLIM7-202ENST00000355841 TMEM238C9JI98 176 aa11.01□□□□□ -0.65
PDLIM7-202ENST00000355841 INAFM2P0DMQ5 153 aa11□□□□□ -0.65
PDLIM7-202ENST00000355841 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
PDLIM7-202ENST00000355841 LYRM7Q5U5X0 104 aa11□□□□□ -0.65
PDLIM7-202ENST00000355841 M0R378 163 aa10.99□□□□□ -0.65
PDLIM7-202ENST00000355841 SPANXDQ9BXN6 97 aa10.99□□□□□ -0.65
PDLIM7-202ENST00000355841 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
PDLIM7-202ENST00000355841 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
PDLIM7-202ENST00000355841 C21orf62-AS1Q17RA5 79 aa10.97□□□□□ -0.65
PDLIM7-202ENST00000355841 J3QR89 54 aa10.96□□□□□ -0.65
PDLIM7-202ENST00000355841 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.66
PDLIM7-202ENST00000355841 NDUFC2O95298 119 aa10.95□□□□□ -0.66
PDLIM7-202ENST00000355841 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
PDLIM7-202ENST00000355841 TRBV10-3A0A0K0K1G6 114 aa10.95□□□□□ -0.66
PDLIM7-202ENST00000355841 IGLV7-43P04211 117 aa10.95□□□□□ -0.66
PDLIM7-202ENST00000355841 PRO0461Q9UI25 63 aa10.94□□□□□ -0.66
PDLIM7-202ENST00000355841 MYCBP2O75592 4640 aa10.94□□□□□ -0.66
PDLIM7-202ENST00000355841 H3BMG7 143 aa10.93□□□□□ -0.66
PDLIM7-202ENST00000355841 TRBV10-2A0A0K0K1G8 114 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 TSPAN13O95857 204 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 TMEM126AQ9H061 195 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 BCE1O60756 84 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 IFITM1P13164 125 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 REG3GQ6UW15 175 aa10.92□□□□□ -0.66
PDLIM7-202ENST00000355841 TRBV20-1A0A075B6N2 111 aa10.91□□□□□ -0.66
PDLIM7-202ENST00000355841 S100A7L2Q5SY68 101 aa10.9□□□□□ -0.66
PDLIM7-202ENST00000355841 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 A0A0B4J2C4 111 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 CFC1BP0CG36 223 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 CFC1P0CG37 223 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 KCNQ1DNQ9H478 68 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 PRO1854Q9UHT4 67 aa10.89□□□□□ -0.67
PDLIM7-202ENST00000355841 IGLV6-57P01721 117 aa10.88□□□□□ -0.67
PDLIM7-202ENST00000355841 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
PDLIM7-202ENST00000355841 OR13C6PQ8NH95 151 aa10.88□□□□□ -0.67
PDLIM7-202ENST00000355841 PRLHP81277 87 aa10.87□□□□□ -0.67
PDLIM7-202ENST00000355841 FAM19A1Q7Z5A9 133 aa10.87□□□□□ -0.67
PDLIM7-202ENST00000355841 LRP1Q07954 4544 aaKnown RBP10.86□□□□□ -0.67
PDLIM7-202ENST00000355841 ZNF861PO60384 105 aa10.86□□□□□ -0.67
PDLIM7-202ENST00000355841 UBE2AP49459 152 aa10.86□□□□□ -0.67
PDLIM7-202ENST00000355841 ETDBQ3ZM63 59 aa10.86□□□□□ -0.67
PDLIM7-202ENST00000355841 PRYO14603 147 aa10.85□□□□□ -0.67
PDLIM7-202ENST00000355841 PPDPFQ9H3Y8 114 aa10.85□□□□□ -0.67
PDLIM7-202ENST00000355841 SCGB1A1P11684 91 aa10.85□□□□□ -0.67
PDLIM7-202ENST00000355841 A4D1N5 150 aa10.84□□□□□ -0.67
PDLIM7-202ENST00000355841 PSMB2P49721 201 aa10.84□□□□□ -0.67
PDLIM7-202ENST00000355841 KRTAP13-1Q8IUC0 172 aa10.84□□□□□ -0.67
PDLIM7-202ENST00000355841 RPL28P46779 137 aaKnown RBP10.83□□□□□ -0.68
PDLIM7-202ENST00000355841 TRAV23DV6A0A075B6W5 121 aa10.82□□□□□ -0.68
PDLIM7-202ENST00000355841 SPRR1AP35321 89 aa10.82□□□□□ -0.68
PDLIM7-202ENST00000355841 DIRC1Q969H9 104 aa10.82□□□□□ -0.68
PDLIM7-202ENST00000355841 H0Y9J4 135 aa10.82□□□□□ -0.68
PDLIM7-202ENST00000355841 KRTAP4-16G5E9R7 235 aaPredicted RBP10.81□□□□□ -0.68
PDLIM7-202ENST00000355841 SMCPP49901 116 aaPredicted RBP10.81□□□□□ -0.68
PDLIM7-202ENST00000355841 SIGMAR1Q99720 223 aa10.81□□□□□ -0.68
PDLIM7-202ENST00000355841 ETDCA0A1B0GVM5 59 aa10.8□□□□□ -0.68
PDLIM7-202ENST00000355841 TCL1BO95988 128 aa10.8□□□□□ -0.68
PDLIM7-202ENST00000355841 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
PDLIM7-202ENST00000355841 ZNF73O43830 326 aaPredicted RBP10.79□□□□□ -0.68
PDLIM7-202ENST00000355841 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
PDLIM7-202ENST00000355841 MTURNQ8N3F0 131 aa10.79□□□□□ -0.68
PDLIM7-202ENST00000355841 PPDPFLQ8WWR9 84 aa10.79□□□□□ -0.68
PDLIM7-202ENST00000355841 SCGB1C2P0DMR2 95 aa10.78□□□□□ -0.68
PDLIM7-202ENST00000355841 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
PDLIM7-202ENST00000355841 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
PDLIM7-202ENST00000355841 B5MCH6 92 aa10.76□□□□□ -0.69
PDLIM7-202ENST00000355841 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
PDLIM7-202ENST00000355841 ATXN8Q156A1 80 aa10.74□□□□□ -0.69
PDLIM7-202ENST00000355841 C6orf99Q4VX62 202 aa10.74□□□□□ -0.69
PDLIM7-202ENST00000355841 KRTAP29-1A8MX34 341 aaPredicted RBP10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 KRTAP1-4P0C5Y4 121 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 Q6ZRX8 168 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 OXTP01178 125 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 SMIM11BQ8TCY0 68 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 SMCR5Q8TEV8 140 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 Q9BRP9 147 aa10.73□□□□□ -0.69
PDLIM7-202ENST00000355841 SLC25A20O43772 301 aa10.72□□□□□ -0.69
PDLIM7-202ENST00000355841 Q1RN00 199 aa10.72□□□□□ -0.69
PDLIM7-202ENST00000355841 ANAPC11Q9NYG5 84 aa10.72□□□□□ -0.69
PDLIM7-202ENST00000355841 RPL13AP40429 203 aaKnown RBP10.71□□□□□ -0.69
PDLIM7-202ENST00000355841 J3QL48 77 aa10.7□□□□□ -0.7
PDLIM7-202ENST00000355841 ERC2-IT1O76042 136 aa10.7□□□□□ -0.7
PDLIM7-202ENST00000355841 ANKRD29Q8N6D5 301 aa10.69□□□□□ -0.7
PDLIM7-202ENST00000355841 C9JAW5 83 aa10.69□□□□□ -0.7
PDLIM7-202ENST00000355841 H7C2G1 150 aa10.69□□□□□ -0.7
PDLIM7-202ENST00000355841 COX6CP09669 75 aa10.69□□□□□ -0.7
PDLIM7-202ENST00000355841 MT1HL1P0DM35 61 aa10.68□□□□□ -0.7
PDLIM7-202ENST00000355841 PRR26Q8N8Z3 221 aa10.68□□□□□ -0.7
PDLIM7-202ENST00000355841 TRIAP1O43715 76 aa10.67□□□□□ -0.7
PDLIM7-202ENST00000355841 COX7BP24311 80 aa10.67□□□□□ -0.7
PDLIM7-202ENST00000355841 CDIP1Q9H305 208 aa10.67□□□□□ -0.7
PDLIM7-202ENST00000355841 ELOF1P60002 83 aaKnown RBP10.66□□□□□ -0.7
PDLIM7-202ENST00000355841 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
PDLIM7-202ENST00000355841 TNXBP22105 4242 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms