RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 LINC00483Q53H64 154 aa8.8□□□□□ -1
DDX55-202ENST00000354291 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
DDX55-202ENST00000354291 Q8NBF4 154 aa8.8□□□□□ -1
DDX55-202ENST00000354291 M0R2T5 61 aa8.79□□□□□ -1
DDX55-202ENST00000354291 GAGE2AQ6NT46 116 aa8.79□□□□□ -1
DDX55-202ENST00000354291 SPINK1P00995 79 aa8.78□□□□□ -1
DDX55-202ENST00000354291 IGLV6-57P01721 117 aa8.78□□□□□ -1
DDX55-202ENST00000354291 XP32Q5T750 250 aa8.78□□□□□ -1
DDX55-202ENST00000354291 Q6ZRX8 168 aa8.78□□□□□ -1
DDX55-202ENST00000354291 E9PLD3 99 aa8.77□□□□□ -1.01
DDX55-202ENST00000354291 JOSD1Q15040 202 aaPredicted RBP8.77□□□□□ -1.01
DDX55-202ENST00000354291 A0A0J9YXY3 114 aa8.76□□□□□ -1.01
DDX55-202ENST00000354291 ERC2-IT1O76042 136 aa8.76□□□□□ -1.01
DDX55-202ENST00000354291 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
DDX55-202ENST00000354291 Q9BRP9 147 aa8.76□□□□□ -1.01
DDX55-202ENST00000354291 TRAV23DV6A0A075B6W5 121 aa8.75□□□□□ -1.01
DDX55-202ENST00000354291 ADAMTSL4-AS1Q5T5F5 129 aa8.75□□□□□ -1.01
DDX55-202ENST00000354291 CBY1Q9Y3M2 126 aa8.75□□□□□ -1.01
DDX55-202ENST00000354291 SYS1-DBNDD2H3BUS1 97 aa8.74□□□□□ -1.01
DDX55-202ENST00000354291 IGLV8-61A0A075B6I0 122 aa8.73□□□□□ -1.01
DDX55-202ENST00000354291 IGLV9-49A0A0B4J1Y8 123 aa8.73□□□□□ -1.01
DDX55-202ENST00000354291 ZNF73O43830 326 aaPredicted RBP8.73□□□□□ -1.01
DDX55-202ENST00000354291 NPC2P61916 151 aa8.73□□□□□ -1.01
DDX55-202ENST00000354291 MOBPQ13875 183 aa8.73□□□□□ -1.01
DDX55-202ENST00000354291 SOSTDC1Q6X4U4 206 aa8.73□□□□□ -1.01
DDX55-202ENST00000354291 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BKO60814 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BJP06899 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BOP23527 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BBP33778 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HINT1P49773 126 aaPredicted RBP8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BDP58876 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BCP62807 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST2H2BEQ16778 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BHQ93079 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BNQ99877 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 HIST1H2BMQ99879 126 aa8.72□□□□□ -1.01
DDX55-202ENST00000354291 PCOTHQ58A44 107 aa8.71□□□□□ -1.02
DDX55-202ENST00000354291 C5orf52A6NGY3 159 aa8.7□□□□□ -1.02
DDX55-202ENST00000354291 TIMM17BO60830 172 aa8.7□□□□□ -1.02
DDX55-202ENST00000354291 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
DDX55-202ENST00000354291 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
DDX55-202ENST00000354291 SSPOA2VEC9 5147 aa8.69□□□□□ -1.02
DDX55-202ENST00000354291 LINC00308Q8TCZ7 52 aa8.69□□□□□ -1.02
DDX55-202ENST00000354291 SPANXCQ9NY87 97 aa8.69□□□□□ -1.02
DDX55-202ENST00000354291 Q8N377 158 aa8.68□□□□□ -1.02
DDX55-202ENST00000354291 LITAFQ99732 161 aa8.68□□□□□ -1.02
DDX55-202ENST00000354291 USH2AO75445 5202 aa8.67□□□□□ -1.02
DDX55-202ENST00000354291 OR13C6PQ8NH95 151 aa8.67□□□□□ -1.02
DDX55-202ENST00000354291 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
DDX55-202ENST00000354291 SLC25A20O43772 301 aa8.66□□□□□ -1.02
DDX55-202ENST00000354291 C9orf153Q5TBE3 101 aa8.65□□□□□ -1.02
DDX55-202ENST00000354291 LINC00518Q8N0U6 118 aa8.65□□□□□ -1.02
DDX55-202ENST00000354291 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
DDX55-202ENST00000354291 ST20-AS1Q8NBB2 130 aa8.64□□□□□ -1.03
DDX55-202ENST00000354291 SPANXDQ9BXN6 97 aa8.64□□□□□ -1.03
DDX55-202ENST00000354291 DHRS4-AS1Q9P1J3 65 aa8.64□□□□□ -1.03
DDX55-202ENST00000354291 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
DDX55-202ENST00000354291 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
DDX55-202ENST00000354291 COX6B2Q6YFQ2 88 aa8.62□□□□□ -1.03
DDX55-202ENST00000354291 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
DDX55-202ENST00000354291 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
DDX55-202ENST00000354291 SPRR1BP22528 89 aa8.6□□□□□ -1.03
DDX55-202ENST00000354291 KRTDAPP60985 99 aa8.6□□□□□ -1.03
DDX55-202ENST00000354291 SCGB1D4Q6XE38 83 aa8.59□□□□□ -1.03
DDX55-202ENST00000354291 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
DDX55-202ENST00000354291 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
DDX55-202ENST00000354291 C20orf202A1L168 122 aa8.58□□□□□ -1.04
DDX55-202ENST00000354291 COX7BP24311 80 aa8.58□□□□□ -1.04
DDX55-202ENST00000354291 ELOF1P60002 83 aaKnown RBP8.58□□□□□ -1.04
DDX55-202ENST00000354291 LAMTOR3Q9UHA4 124 aa8.58□□□□□ -1.04
DDX55-202ENST00000354291 C6orf99Q4VX62 202 aa8.57□□□□□ -1.04
DDX55-202ENST00000354291 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
DDX55-202ENST00000354291 IFITM1P13164 125 aa8.56□□□□□ -1.04
DDX55-202ENST00000354291 TRBV7-6A0A0J9YX20 115 aa8.55□□□□□ -1.04
DDX55-202ENST00000354291 AKR1D1P51857 326 aa8.55□□□□□ -1.04
DDX55-202ENST00000354291 TAL2Q16559 108 aa8.55□□□□□ -1.04
DDX55-202ENST00000354291 Q6ZVH6 145 aa8.55□□□□□ -1.04
DDX55-202ENST00000354291 LIMD2Q9BT23 127 aa8.55□□□□□ -1.04
DDX55-202ENST00000354291 TEX49A0A1B0GTD5 131 aa8.52□□□□□ -1.05
DDX55-202ENST00000354291 ANKRD39Q53RE8 183 aa8.52□□□□□ -1.05
DDX55-202ENST00000354291 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
DDX55-202ENST00000354291 A0A1B0GWB2 263 aa8.51□□□□□ -1.05
DDX55-202ENST00000354291 A6NDN8 102 aa8.51□□□□□ -1.05
DDX55-202ENST00000354291 HRCT1Q6UXD1 115 aa8.51□□□□□ -1.05
DDX55-202ENST00000354291 CD164Q04900 197 aa8.5□□□□□ -1.05
DDX55-202ENST00000354291 MUSTN1Q8IVN3 82 aa8.5□□□□□ -1.05
DDX55-202ENST00000354291 ATOH7Q8N100 152 aa8.5□□□□□ -1.05
DDX55-202ENST00000354291 PRO1933Q9H354 126 aa8.5□□□□□ -1.05
DDX55-202ENST00000354291 A4D1N5 150 aa8.49□□□□□ -1.05
DDX55-202ENST00000354291 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
DDX55-202ENST00000354291 Q1RN00 199 aa8.49□□□□□ -1.05
DDX55-202ENST00000354291 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
DDX55-202ENST00000354291 SYNE2Q8WXH0 6885 aaKnown RBP8.47□□□□□ -1.05
DDX55-202ENST00000354291 TRAV13-2A0A0B4J235 113 aa8.47□□□□□ -1.05
DDX55-202ENST00000354291 IGLV5-48A0A075B6I7 105 aa8.45□□□□□ -1.06
DDX55-202ENST00000354291 H7C2G1 150 aa8.45□□□□□ -1.06
DDX55-202ENST00000354291 NHP2Q9NX24 153 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms