RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 Q8NAQ8 132 aa7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 PCSK5Q92824 1860 aa7.43□□□□□ -1.22
SMARCE1-202ENST00000348513 Q8N9P0 234 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1-202ENST00000348513 FASNP49327 2511 aaKnown RBP7.43□□□□□ -1.22
SMARCE1-202ENST00000348513 NBDYA0A0U1RRE5 68 aa7.42□□□□□ -1.22
SMARCE1-202ENST00000348513 ACANP16112 2415 aa7.42□□□□□ -1.22
SMARCE1-202ENST00000348513 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-202ENST00000348513 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
SMARCE1-202ENST00000348513 A8MWP4 228 aa7.41□□□□□ -1.22
SMARCE1-202ENST00000348513 ST20-AS1Q8NBB2 130 aa7.4□□□□□ -1.22
SMARCE1-202ENST00000348513 LINC00476Q8WZB0 136 aa7.4□□□□□ -1.22
SMARCE1-202ENST00000348513 ASB16-AS1Q495Z4 193 aa7.4□□□□□ -1.23
SMARCE1-202ENST00000348513 KRTAP16-1A8MUX0 517 aa7.39□□□□□ -1.23
SMARCE1-202ENST00000348513 H3BNG1 76 aa7.39□□□□□ -1.23
SMARCE1-202ENST00000348513 FAM229AH3BQW9 127 aa7.38□□□□□ -1.23
SMARCE1-202ENST00000348513 FAM168BA1KXE4 195 aa7.37□□□□□ -1.23
SMARCE1-202ENST00000348513 KRTAP10-11P60412 298 aa7.36□□□□□ -1.23
SMARCE1-202ENST00000348513 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
SMARCE1-202ENST00000348513 PLA2G1BP04054 148 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-202ENST00000348513 DMAC1Q96GE9 116 aa7.35□□□□□ -1.23
SMARCE1-202ENST00000348513 Q6ZRX8 168 aa7.35□□□□□ -1.23
SMARCE1-202ENST00000348513 TYMSOSQ8TAI1 123 aa7.34□□□□□ -1.23
SMARCE1-202ENST00000348513 A6NN06 94 aa7.33□□□□□ -1.24
SMARCE1-202ENST00000348513 WWC2-AS2Q96NR7 200 aa7.32□□□□□ -1.24
SMARCE1-202ENST00000348513 DNAH10OSP0CZ25 163 aa7.32□□□□□ -1.24
SMARCE1-202ENST00000348513 LUZP6Q538Z0 58 aa7.32□□□□□ -1.24
SMARCE1-202ENST00000348513 GVQW2A0A096LPI5 108 aaPredicted RBP7.31□□□□□ -1.24
SMARCE1-202ENST00000348513 KRTAP10-3P60369 221 aa7.31□□□□□ -1.24
SMARCE1-202ENST00000348513 K7EIL1 84 aa7.31□□□□□ -1.24
SMARCE1-202ENST00000348513 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
SMARCE1-202ENST00000348513 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
SMARCE1-202ENST00000348513 CSNK1G2-AS1Q8NCQ2 148 aa7.29□□□□□ -1.24
SMARCE1-202ENST00000348513 IGLV7-46A0A075B6I9 117 aa7.29□□□□□ -1.24
SMARCE1-202ENST00000348513 SPINK7P58062 85 aa7.28□□□□□ -1.24
SMARCE1-202ENST00000348513 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
SMARCE1-202ENST00000348513 Q96NJ1 140 aa7.27□□□□□ -1.25
SMARCE1-202ENST00000348513 F8P00451 2351 aa7.27□□□□□ -1.25
SMARCE1-202ENST00000348513 EPG5Q9HCE0 2579 aa7.26□□□□□ -1.25
SMARCE1-202ENST00000348513 CEP350Q5VT06 3117 aa7.26□□□□□ -1.25
SMARCE1-202ENST00000348513 A0A096LNT2 108 aa7.25□□□□□ -1.25
SMARCE1-202ENST00000348513 C9orf163Q8N9P6 203 aa7.25□□□□□ -1.25
SMARCE1-202ENST00000348513 PRRC2CQ9Y520 2896 aaKnown RBP7.25□□□□□ -1.25
SMARCE1-202ENST00000348513 KLK9Q2XQG4 91 aa7.24□□□□□ -1.25
SMARCE1-202ENST00000348513 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.25
SMARCE1-202ENST00000348513 SMR3BP02814 79 aaPredicted RBP7.21□□□□□ -1.25
SMARCE1-202ENST00000348513 GIG44P09565 113 aaPredicted RBP7.21□□□□□ -1.25
SMARCE1-202ENST00000348513 LINC00528Q8N1L1 170 aa7.21□□□□□ -1.26
SMARCE1-202ENST00000348513 C19orf73Q9NVV2 129 aa7.21□□□□□ -1.26
SMARCE1-202ENST00000348513 IGLV1-50A0A075B6I6 118 aa7.2□□□□□ -1.26
SMARCE1-202ENST00000348513 C5orf42Q9H799 3197 aa7.2□□□□□ -1.26
SMARCE1-202ENST00000348513 C8orf17Q9NRJ1 99 aa7.2□□□□□ -1.26
SMARCE1-202ENST00000348513 C15orf56Q8N910 161 aa7.19□□□□□ -1.26
SMARCE1-202ENST00000348513 A0A0G2JQZ4 141 aa7.19□□□□□ -1.26
SMARCE1-202ENST00000348513 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
SMARCE1-202ENST00000348513 HECTD1Q9ULT8 2610 aa7.19□□□□□ -1.26
SMARCE1-202ENST00000348513 APLNQ9ULZ1 77 aa7.19□□□□□ -1.26
SMARCE1-202ENST00000348513 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
SMARCE1-202ENST00000348513 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
SMARCE1-202ENST00000348513 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
SMARCE1-202ENST00000348513 C9orf92A6NGG3 77 aa7.16□□□□□ -1.26
SMARCE1-202ENST00000348513 DSCR10P59022 87 aa7.15□□□□□ -1.26
SMARCE1-202ENST00000348513 KRTAP1-3Q8IUG1 177 aa7.15□□□□□ -1.26
SMARCE1-202ENST00000348513 Q8N377 158 aa7.15□□□□□ -1.26
SMARCE1-202ENST00000348513 FLNBO75369 2602 aaKnown RBP7.15□□□□□ -1.27
SMARCE1-202ENST00000348513 CASC10Q5T4H9 136 aa7.15□□□□□ -1.27
SMARCE1-202ENST00000348513 A0A087WTM6 91 aa7.14□□□□□ -1.27
SMARCE1-202ENST00000348513 PCNTO95613 3336 aa7.14□□□□□ -1.27
SMARCE1-202ENST00000348513 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
SMARCE1-202ENST00000348513 PRR34Q9NV39 138 aa7.14□□□□□ -1.27
SMARCE1-202ENST00000348513 A0A1W2PNM2 257 aa7.12□□□□□ -1.27
SMARCE1-202ENST00000348513 A0A1B0GVX0 72 aa7.11□□□□□ -1.27
SMARCE1-202ENST00000348513 LINC00304Q8N9R0 145 aa7.1□□□□□ -1.27
SMARCE1-202ENST00000348513 USP24Q9UPU5 2620 aa7.1□□□□□ -1.27
SMARCE1-202ENST00000348513 HRES1P13985 223 aa7.1□□□□□ -1.27
SMARCE1-202ENST00000348513 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
SMARCE1-202ENST00000348513 ZNF861PO60384 105 aa7.1□□□□□ -1.27
SMARCE1-202ENST00000348513 BPTFQ12830 3046 aa7.08□□□□□ -1.28
SMARCE1-202ENST00000348513 LINC00612Q8N6U2 182 aa7.08□□□□□ -1.28
SMARCE1-202ENST00000348513 MGAM2Q2M2H8 2515 aa7.07□□□□□ -1.28
SMARCE1-202ENST00000348513 IGLV5-48A0A075B6I7 105 aa7.07□□□□□ -1.28
SMARCE1-202ENST00000348513 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
SMARCE1-202ENST00000348513 CHD7Q9P2D1 2997 aa7.05□□□□□ -1.28
SMARCE1-202ENST00000348513 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
SMARCE1-202ENST00000348513 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
SMARCE1-202ENST00000348513 A0A087X002 238 aa7.02□□□□□ -1.29
SMARCE1-202ENST00000348513 SPRR4Q96PI1 79 aa7.01□□□□□ -1.29
SMARCE1-202ENST00000348513 A0A1B0GU33 70 aa7.01□□□□□ -1.29
SMARCE1-202ENST00000348513 ADM2Q7Z4H4 148 aa7.01□□□□□ -1.29
SMARCE1-202ENST00000348513 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
SMARCE1-202ENST00000348513 ROMO1P60602 79 aa6.98□□□□□ -1.29
SMARCE1-202ENST00000348513 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
SMARCE1-202ENST00000348513 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
SMARCE1-202ENST00000348513 A8MU10 97 aa6.98□□□□□ -1.29
SMARCE1-202ENST00000348513 A0A0D9SG42 100 aa6.97□□□□□ -1.29
SMARCE1-202ENST00000348513 SPATA8Q6RVD6 105 aa6.97□□□□□ -1.29
SMARCE1-202ENST00000348513 TNP2Q05952 138 aa6.97□□□□□ -1.29
SMARCE1-202ENST00000348513 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-202ENST00000348513 NDUFAF8A1L188 74 aa6.96□□□□□ -1.29
SMARCE1-202ENST00000348513 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms