RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 LELP1Q5T871 98 aa10.36□□□□□ -0.75
LRP8-202ENST00000347547 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
LRP8-202ENST00000347547 KLK12Q9UKR0 248 aa10.35□□□□□ -0.75
LRP8-202ENST00000347547 NOTCH2Q04721 2471 aa10.34□□□□□ -0.75
LRP8-202ENST00000347547 IGLV5-48A0A075B6I7 105 aa10.34□□□□□ -0.75
LRP8-202ENST00000347547 DAD1P61803 113 aa10.34□□□□□ -0.75
LRP8-202ENST00000347547 Q6ZRU5 148 aa10.34□□□□□ -0.75
LRP8-202ENST00000347547 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
LRP8-202ENST00000347547 NSD1Q96L73 2696 aaPredicted RBP10.34□□□□□ -0.75
LRP8-202ENST00000347547 C3orf84H3BNL1 204 aa10.33□□□□□ -0.76
LRP8-202ENST00000347547 EGFEM1PQ0D2K5 195 aa10.33□□□□□ -0.76
LRP8-202ENST00000347547 Q6ZRP5 223 aa10.33□□□□□ -0.76
LRP8-202ENST00000347547 HIVEP1P15822 2718 aa10.32□□□□□ -0.76
LRP8-202ENST00000347547 C1orf64Q8NEQ6 169 aa10.32□□□□□ -0.76
LRP8-202ENST00000347547 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
LRP8-202ENST00000347547 HIVEP2P31629 2446 aa10.32□□□□□ -0.76
LRP8-202ENST00000347547 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
LRP8-202ENST00000347547 KPRPQ5T749 579 aaPredicted RBP10.3□□□□□ -0.76
LRP8-202ENST00000347547 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
LRP8-202ENST00000347547 Q8N377 158 aa10.29□□□□□ -0.76
LRP8-202ENST00000347547 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
LRP8-202ENST00000347547 CAMK2N2Q96S95 79 aa10.28□□□□□ -0.76
LRP8-202ENST00000347547 ETDCA0A1B0GVM5 59 aa10.27□□□□□ -0.77
LRP8-202ENST00000347547 KCNQ1DNQ9H478 68 aa10.25□□□□□ -0.77
LRP8-202ENST00000347547 A0A1W2PNM2 257 aa10.25□□□□□ -0.77
LRP8-202ENST00000347547 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
LRP8-202ENST00000347547 TNP2Q05952 138 aa10.23□□□□□ -0.77
LRP8-202ENST00000347547 TRAV22A0A0B4J277 110 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.22□□□□□ -0.77
LRP8-202ENST00000347547 INAFM1C9JVW0 142 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 DEFB4AO15263 64 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 Q8NBF4 154 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
LRP8-202ENST00000347547 LRCOL1A6NCL2 159 aa10.21□□□□□ -0.77
LRP8-202ENST00000347547 DSCR10P59022 87 aa10.21□□□□□ -0.77
LRP8-202ENST00000347547 DEFB105AQ8NG35 78 aa10.2□□□□□ -0.78
LRP8-202ENST00000347547 DHRS4-AS1Q9P1J3 65 aa10.2□□□□□ -0.78
LRP8-202ENST00000347547 PSCAO43653 123 aa10.19□□□□□ -0.78
LRP8-202ENST00000347547 NDUFB1O75438 58 aa10.19□□□□□ -0.78
LRP8-202ENST00000347547 KRTAP10-3P60369 221 aa10.19□□□□□ -0.78
LRP8-202ENST00000347547 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
LRP8-202ENST00000347547 DEFB135Q30KP9 77 aa10.18□□□□□ -0.78
LRP8-202ENST00000347547 C1orf137Q5JT78 98 aa10.18□□□□□ -0.78
LRP8-202ENST00000347547 Q8NAQ8 132 aa10.18□□□□□ -0.78
LRP8-202ENST00000347547 PSPHP1O15172 72 aa10.17□□□□□ -0.78
LRP8-202ENST00000347547 FLNBO75369 2602 aaKnown RBP10.16□□□□□ -0.78
LRP8-202ENST00000347547 K7EQZ3 153 aa10.16□□□□□ -0.78
LRP8-202ENST00000347547 SPART-AS1P0CW21 52 aa10.16□□□□□ -0.78
LRP8-202ENST00000347547 APOC4P55056 127 aa10.15□□□□□ -0.78
LRP8-202ENST00000347547 Q6ZRX8 168 aa10.15□□□□□ -0.78
LRP8-202ENST00000347547 TENM1Q9UKZ4 2725 aa10.15□□□□□ -0.78
LRP8-202ENST00000347547 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.79
LRP8-202ENST00000347547 ST20-AS1Q8NBB2 130 aa10.15□□□□□ -0.79
LRP8-202ENST00000347547 C7orf33Q8WU49 177 aa10.15□□□□□ -0.79
LRP8-202ENST00000347547 HCG22E2RYF7 251 aa10.14□□□□□ -0.79
LRP8-202ENST00000347547 KRTAP4-16G5E9R7 235 aaPredicted RBP10.14□□□□□ -0.79
LRP8-202ENST00000347547 HTN3P15516 51 aa10.14□□□□□ -0.79
LRP8-202ENST00000347547 VWFP04275 2813 aa10.13□□□□□ -0.79
LRP8-202ENST00000347547 Q9BRP9 147 aa10.12□□□□□ -0.79
LRP8-202ENST00000347547 PLA2G2DQ9UNK4 145 aa10.12□□□□□ -0.79
LRP8-202ENST00000347547 F8P00451 2351 aa10.12□□□□□ -0.79
LRP8-202ENST00000347547 SERTAD4-AS1Q5TG53 156 aa10.11□□□□□ -0.79
LRP8-202ENST00000347547 SPRR1AP35321 89 aa10.1□□□□□ -0.79
LRP8-202ENST00000347547 A8MUN3 132 aa10.1□□□□□ -0.79
LRP8-202ENST00000347547 SYCNQ0VAF6 134 aa10.1□□□□□ -0.79
LRP8-202ENST00000347547 Q5VV11 94 aa10.09□□□□□ -0.79
LRP8-202ENST00000347547 WFDC10BQ8IUB3 73 aa10.09□□□□□ -0.79
LRP8-202ENST00000347547 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
LRP8-202ENST00000347547 CD164Q04900 197 aa10.08□□□□□ -0.8
LRP8-202ENST00000347547 SPANXA2-OT1Q8N9U9 137 aa10.08□□□□□ -0.8
LRP8-202ENST00000347547 B9D2Q9BPU9 175 aa10.08□□□□□ -0.8
LRP8-202ENST00000347547 MP68P56378 58 aa10.07□□□□□ -0.8
LRP8-202ENST00000347547 PRR4Q16378 134 aa10.07□□□□□ -0.8
LRP8-202ENST00000347547 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
LRP8-202ENST00000347547 UBE2BP63146 152 aa10.06□□□□□ -0.8
LRP8-202ENST00000347547 H3BNG1 76 aa10.06□□□□□ -0.8
LRP8-202ENST00000347547 TEP1Q99973 2627 aaKnown RBP10.05□□□□□ -0.8
LRP8-202ENST00000347547 BAHCC1Q9P281 2608 aa10.05□□□□□ -0.8
LRP8-202ENST00000347547 IGLV1-50A0A075B6I6 118 aa10.05□□□□□ -0.8
LRP8-202ENST00000347547 H3BPC8 53 aa10.04□□□□□ -0.8
LRP8-202ENST00000347547 LIMD2Q9BT23 127 aa10.04□□□□□ -0.8
LRP8-202ENST00000347547 UBE2AP49459 152 aa10.03□□□□□ -0.8
LRP8-202ENST00000347547 ATRQ13535 2644 aa10.03□□□□□ -0.8
LRP8-202ENST00000347547 Q8N9P0 234 aaPredicted RBP10.02□□□□□ -0.81
LRP8-202ENST00000347547 RPL37AP8A6NKH3 93 aa10□□□□□ -0.81
LRP8-202ENST00000347547 LINC00476Q8WZB0 136 aa10□□□□□ -0.81
LRP8-202ENST00000347547 LINC00208Q96KT6 92 aa10□□□□□ -0.81
LRP8-202ENST00000347547 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
LRP8-202ENST00000347547 LINC00588Q9Y4M8 146 aa9.99□□□□□ -0.81
LRP8-202ENST00000347547 IGKV2D-24A0A075B6R9 120 aa9.98□□□□□ -0.81
LRP8-202ENST00000347547 A8MU10 97 aa9.97□□□□□ -0.81
LRP8-202ENST00000347547 MRPL55Q7Z7F7 128 aaKnown RBP9.97□□□□□ -0.81
LRP8-202ENST00000347547 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
LRP8-202ENST00000347547 LINC01556Q5JQF7 62 aa9.96□□□□□ -0.81
LRP8-202ENST00000347547 WFDC13Q8IUB5 93 aa9.96□□□□□ -0.81
LRP8-202ENST00000347547 FBN1P35555 2871 aaKnown RBP9.96□□□□□ -0.82
LRP8-202ENST00000347547 CHKB-CPT1BH3BT56 60 aa9.96□□□□□ -0.82
LRP8-202ENST00000347547 KTN1-AS1Q86SY8 53 aa9.96□□□□□ -0.82
LRP8-202ENST00000347547 C16orf90A8MZG2 172 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms