RNA–Protein interactions for RNA: ENST00000343137.8

PRDM2-203, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-203ENST00000343137 LCA10Q71F78 164 aa5.48□□□□□ -1.53
PRDM2-203ENST00000343137 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
PRDM2-203ENST00000343137 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
PRDM2-203ENST00000343137 CNBPP62633 177 aaKnown RBP5.48□□□□□ -1.53
PRDM2-203ENST00000343137 LINC00336Q6ZUF6 198 aa5.47□□□□□ -1.53
PRDM2-203ENST00000343137 SSBP3-AS1Q7Z2R9 100 aa5.47□□□□□ -1.53
PRDM2-203ENST00000343137 DNAH12Q6ZR08 3092 aa5.47□□□□□ -1.53
PRDM2-203ENST00000343137 H3BS24 57 aa5.47□□□□□ -1.53
PRDM2-203ENST00000343137 ZNF462Q96JM2 2506 aa5.47□□□□□ -1.53
PRDM2-203ENST00000343137 A0A1W2PNM2 257 aa5.46□□□□□ -1.53
PRDM2-203ENST00000343137 A8MUN3 132 aa5.46□□□□□ -1.53
PRDM2-203ENST00000343137 C9orf163Q8N9P6 203 aa5.46□□□□□ -1.54
PRDM2-203ENST00000343137 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
PRDM2-203ENST00000343137 KRTAP1-1Q07627 177 aa5.45□□□□□ -1.54
PRDM2-203ENST00000343137 UTRNP46939 3433 aa5.45□□□□□ -1.54
PRDM2-203ENST00000343137 K7EIL1 84 aa5.45□□□□□ -1.54
PRDM2-203ENST00000343137 ZNF861PO60384 105 aa5.45□□□□□ -1.54
PRDM2-203ENST00000343137 ATP11AUNQ6ZP68 121 aa5.44□□□□□ -1.54
PRDM2-203ENST00000343137 OCR1Q9BZK8 76 aa5.43□□□□□ -1.54
PRDM2-203ENST00000343137 SPRR4Q96PI1 79 aa5.42□□□□□ -1.54
PRDM2-203ENST00000343137 JMJD1CQ15652 2540 aa5.42□□□□□ -1.54
PRDM2-203ENST00000343137 Q96NJ1 140 aa5.41□□□□□ -1.54
PRDM2-203ENST00000343137 ZFYVE26Q68DK2 2539 aa5.41□□□□□ -1.54
PRDM2-203ENST00000343137 PKD1L2Q7Z442 2459 aa5.41□□□□□ -1.54
PRDM2-203ENST00000343137 UQCR11O14957 56 aa5.41□□□□□ -1.54
PRDM2-203ENST00000343137 A0A1W2PNN7 141 aa5.4□□□□□ -1.54
PRDM2-203ENST00000343137 A0A087WTM6 91 aa5.4□□□□□ -1.54
PRDM2-203ENST00000343137 SPINT4Q6UDR6 99 aa5.4□□□□□ -1.54
PRDM2-203ENST00000343137 SETD2Q9BYW2 2564 aaPredicted RBP5.4□□□□□ -1.55
PRDM2-203ENST00000343137 SPTBN4Q9H254 2564 aa5.39□□□□□ -1.55
PRDM2-203ENST00000343137 CHD8Q9HCK8 2581 aa5.39□□□□□ -1.55
PRDM2-203ENST00000343137 APLNQ9ULZ1 77 aa5.39□□□□□ -1.55
PRDM2-203ENST00000343137 WWC2-AS2Q96NR7 200 aa5.38□□□□□ -1.55
PRDM2-203ENST00000343137 Q1T7F1 81 aa5.38□□□□□ -1.55
PRDM2-203ENST00000343137 DSCR10P59022 87 aa5.37□□□□□ -1.55
PRDM2-203ENST00000343137 CASC10Q5T4H9 136 aa5.37□□□□□ -1.55
PRDM2-203ENST00000343137 MTORP42345 2549 aa5.37□□□□□ -1.55
PRDM2-203ENST00000343137 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
PRDM2-203ENST00000343137 IGLV7-43P04211 117 aa5.36□□□□□ -1.55
PRDM2-203ENST00000343137 POLQO75417 2590 aa5.36□□□□□ -1.55
PRDM2-203ENST00000343137 A0A0G2JQZ4 141 aa5.35□□□□□ -1.55
PRDM2-203ENST00000343137 MIR22HGQ0VDD5 57 aa5.35□□□□□ -1.55
PRDM2-203ENST00000343137 PSORS1C2Q9UIG4 136 aa5.34□□□□□ -1.55
PRDM2-203ENST00000343137 SPRR1AP35321 89 aa5.34□□□□□ -1.55
PRDM2-203ENST00000343137 LINC00304Q8N9R0 145 aa5.33□□□□□ -1.56
PRDM2-203ENST00000343137 CDC42SE1Q9NRR8 79 aa5.33□□□□□ -1.56
PRDM2-203ENST00000343137 RBM12B-AS1Q9P1G2 102 aa5.33□□□□□ -1.56
PRDM2-203ENST00000343137 CHD7Q9P2D1 2997 aa5.32□□□□□ -1.56
PRDM2-203ENST00000343137 IGLV7-46A0A075B6I9 117 aa5.31□□□□□ -1.56
PRDM2-203ENST00000343137 ACANP16112 2415 aa5.31□□□□□ -1.56
PRDM2-203ENST00000343137 IGLV8-61A0A075B6I0 122 aa5.3□□□□□ -1.56
PRDM2-203ENST00000343137 Q8NDZ9 215 aa5.3□□□□□ -1.56
PRDM2-203ENST00000343137 CR1P17927 2039 aa5.29□□□□□ -1.56
PRDM2-203ENST00000343137 CHD9Q3L8U1 2897 aa5.29□□□□□ -1.56
PRDM2-203ENST00000343137 Q5XG85 94 aa5.29□□□□□ -1.56
PRDM2-203ENST00000343137 SPRR1BP22528 89 aa5.28□□□□□ -1.56
PRDM2-203ENST00000343137 CEP350Q5VT06 3117 aa5.28□□□□□ -1.56
PRDM2-203ENST00000343137 Q75L30 129 aa5.27□□□□□ -1.57
PRDM2-203ENST00000343137 ANAPC11Q9NYG5 84 aa5.26□□□□□ -1.57
PRDM2-203ENST00000343137 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
PRDM2-203ENST00000343137 CYSTM1Q9H1C7 97 aa5.24□□□□□ -1.57
PRDM2-203ENST00000343137 PRRC2CQ9Y520 2896 aaKnown RBP5.24□□□□□ -1.57
PRDM2-203ENST00000343137 LINC01554Q52M75 96 aa5.24□□□□□ -1.57
PRDM2-203ENST00000343137 KRTAP26-1Q6PEX3 210 aa5.24□□□□□ -1.57
PRDM2-203ENST00000343137 FAM229BQ4G0N7 80 aa5.24□□□□□ -1.57
PRDM2-203ENST00000343137 PCNTO95613 3336 aa5.23□□□□□ -1.57
PRDM2-203ENST00000343137 LINC01558Q9Y6Z2 57 aa5.23□□□□□ -1.57
PRDM2-203ENST00000343137 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
PRDM2-203ENST00000343137 TRANK1O15050 2925 aa5.22□□□□□ -1.57
PRDM2-203ENST00000343137 LINC00472Q9H8W2 130 aa5.22□□□□□ -1.57
PRDM2-203ENST00000343137 PLAC8Q9NZF1 115 aa5.21□□□□□ -1.57
PRDM2-203ENST00000343137 Q8N9P0 234 aaPredicted RBP5.21□□□□□ -1.58
PRDM2-203ENST00000343137 HTTP42858 3142 aa5.2□□□□□ -1.58
PRDM2-203ENST00000343137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.2□□□□□ -1.58
PRDM2-203ENST00000343137 FASNP49327 2511 aaKnown RBP5.2□□□□□ -1.58
PRDM2-203ENST00000343137 TNP2Q05952 138 aa5.19□□□□□ -1.58
PRDM2-203ENST00000343137 C9orf92A6NGG3 77 aa5.19□□□□□ -1.58
PRDM2-203ENST00000343137 F8P00451 2351 aa5.19□□□□□ -1.58
PRDM2-203ENST00000343137 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
PRDM2-203ENST00000343137 C5orf42Q9H799 3197 aa5.18□□□□□ -1.58
PRDM2-203ENST00000343137 HRES1P13985 223 aa5.18□□□□□ -1.58
PRDM2-203ENST00000343137 PRR26Q8N8Z3 221 aa5.18□□□□□ -1.58
PRDM2-203ENST00000343137 Q8N1X5 172 aa5.15□□□□□ -1.58
PRDM2-203ENST00000343137 KRTAP4-16G5E9R7 235 aaPredicted RBP5.15□□□□□ -1.59
PRDM2-203ENST00000343137 Q5VV11 94 aa5.14□□□□□ -1.59
PRDM2-203ENST00000343137 OXTP01178 125 aa5.14□□□□□ -1.59
PRDM2-203ENST00000343137 FLNAP21333 2647 aaKnown RBP5.13□□□□□ -1.59
PRDM2-203ENST00000343137 LINC00483Q53H64 154 aa5.13□□□□□ -1.59
PRDM2-203ENST00000343137 EPG5Q9HCE0 2579 aa5.12□□□□□ -1.59
PRDM2-203ENST00000343137 ZCCHC13Q8WW36 166 aaKnown RBP5.12□□□□□ -1.59
PRDM2-203ENST00000343137 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
PRDM2-203ENST00000343137 SMR3BP02814 79 aaPredicted RBP5.11□□□□□ -1.59
PRDM2-203ENST00000343137 Q5W150 140 aa5.11□□□□□ -1.59
PRDM2-203ENST00000343137 A0A1B0GU33 70 aa5.1□□□□□ -1.59
PRDM2-203ENST00000343137 Q6ZR54 194 aa5.09□□□□□ -1.59
PRDM2-203ENST00000343137 KRTAP29-1A8MX34 341 aaPredicted RBP5.09□□□□□ -1.6
PRDM2-203ENST00000343137 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.6
PRDM2-203ENST00000343137 LUZP6Q538Z0 58 aa5.08□□□□□ -1.6
PRDM2-203ENST00000343137 ITPR3Q14573 2671 aa5.08□□□□□ -1.6
PRDM2-203ENST00000343137 J3QL48 77 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms