RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SOSTDC1Q6X4U4 206 aa8.35□□□□□ -1.07
LIN54-201ENST00000340417 TLX1NBP0CAT3 122 aa8.35□□□□□ -1.07
LIN54-201ENST00000340417 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
LIN54-201ENST00000340417 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
LIN54-201ENST00000340417 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
LIN54-201ENST00000340417 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
LIN54-201ENST00000340417 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
LIN54-201ENST00000340417 Q96NJ1 140 aa8.32□□□□□ -1.08
LIN54-201ENST00000340417 LINC00313P59037 77 aa8.32□□□□□ -1.08
LIN54-201ENST00000340417 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
LIN54-201ENST00000340417 KCNQ1DNQ9H478 68 aa8.3□□□□□ -1.08
LIN54-201ENST00000340417 SSBP3-AS1Q7Z2R9 100 aa8.29□□□□□ -1.08
LIN54-201ENST00000340417 IGLV6-57P01721 117 aa8.29□□□□□ -1.08
LIN54-201ENST00000340417 C20orf197Q8N268 126 aa8.29□□□□□ -1.08
LIN54-201ENST00000340417 SERP1Q9Y6X1 66 aa8.28□□□□□ -1.08
LIN54-201ENST00000340417 ANAPC11Q9NYG5 84 aa8.27□□□□□ -1.08
LIN54-201ENST00000340417 PLA2G2DQ9UNK4 145 aa8.27□□□□□ -1.08
LIN54-201ENST00000340417 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
LIN54-201ENST00000340417 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
LIN54-201ENST00000340417 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
LIN54-201ENST00000340417 SPINK1P00995 79 aa8.23□□□□□ -1.09
LIN54-201ENST00000340417 Q5VSD8 79 aa8.22□□□□□ -1.09
LIN54-201ENST00000340417 VPS13AQ96RL7 3174 aa8.22□□□□□ -1.09
LIN54-201ENST00000340417 PCOTHQ58A44 107 aa8.21□□□□□ -1.09
LIN54-201ENST00000340417 hDV103S1A0JD37 113 aa8.21□□□□□ -1.09
LIN54-201ENST00000340417 K7ERS5 55 aa8.21□□□□□ -1.1
LIN54-201ENST00000340417 FRYLO94915 3013 aa8.2□□□□□ -1.1
LIN54-201ENST00000340417 MT-ATP8P03928 68 aa8.2□□□□□ -1.1
LIN54-201ENST00000340417 H0Y9P7 68 aa8.2□□□□□ -1.1
LIN54-201ENST00000340417 FAM218AQ96MZ4 157 aa8.2□□□□□ -1.1
LIN54-201ENST00000340417 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
LIN54-201ENST00000340417 ITPR2Q14571 2701 aa8.19□□□□□ -1.1
LIN54-201ENST00000340417 SNURFQ9Y675 71 aa8.19□□□□□ -1.1
LIN54-201ENST00000340417 SPRR4Q96PI1 79 aa8.18□□□□□ -1.1
LIN54-201ENST00000340417 FRYQ5TBA9 3013 aa8.17□□□□□ -1.1
LIN54-201ENST00000340417 FLNCQ14315 2725 aa8.17□□□□□ -1.1
LIN54-201ENST00000340417 A0A1B0GW54 56 aa8.17□□□□□ -1.1
LIN54-201ENST00000340417 PRR26Q8N8Z3 221 aa8.17□□□□□ -1.1
LIN54-201ENST00000340417 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
LIN54-201ENST00000340417 LITAFQ99732 161 aa8.16□□□□□ -1.1
LIN54-201ENST00000340417 DMXL2Q8TDJ6 3036 aa8.16□□□□□ -1.1
LIN54-201ENST00000340417 SPTBN5Q9NRC6 3674 aaKnown RBP8.16□□□□□ -1.1
LIN54-201ENST00000340417 C7orf65Q6ZTY9 151 aa8.15□□□□□ -1.1
LIN54-201ENST00000340417 NOTCH1P46531 2555 aa8.15□□□□□ -1.1
LIN54-201ENST00000340417 VCANP13611 3396 aa8.15□□□□□ -1.11
LIN54-201ENST00000340417 IMUPQ9GZP8 106 aa8.15□□□□□ -1.11
LIN54-201ENST00000340417 KRTAP1-5Q9BYS1 174 aa8.15□□□□□ -1.11
LIN54-201ENST00000340417 FAM240AA0A1B0GVK7 77 aa8.14□□□□□ -1.11
LIN54-201ENST00000340417 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
LIN54-201ENST00000340417 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
LIN54-201ENST00000340417 PLAC8Q9NZF1 115 aa8.14□□□□□ -1.11
LIN54-201ENST00000340417 LINC00846Q9NV44 126 aa8.13□□□□□ -1.11
LIN54-201ENST00000340417 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
LIN54-201ENST00000340417 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 HIVEP1P15822 2718 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 IGLV7-46A0A075B6I9 117 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 A0A087WVE0 104 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
LIN54-201ENST00000340417 MAP1AP78559 2803 aaPredicted RBP8.11□□□□□ -1.11
LIN54-201ENST00000340417 DSCR10P59022 87 aa8.11□□□□□ -1.11
LIN54-201ENST00000340417 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
LIN54-201ENST00000340417 LAMA1P25391 3075 aa8.11□□□□□ -1.11
LIN54-201ENST00000340417 IGLV5-37A0A075B6J1 123 aa8.11□□□□□ -1.11
LIN54-201ENST00000340417 NDUFC1O43677 76 aa8.11□□□□□ -1.11
LIN54-201ENST00000340417 EYSQ5T1H1 3165 aa8.1□□□□□ -1.11
LIN54-201ENST00000340417 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
LIN54-201ENST00000340417 CXCL6P80162 114 aa8.1□□□□□ -1.11
LIN54-201ENST00000340417 UQCRQO14949 82 aa8.1□□□□□ -1.11
LIN54-201ENST00000340417 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
LIN54-201ENST00000340417 Q6ZQT0 140 aa8.09□□□□□ -1.11
LIN54-201ENST00000340417 ATMQ13315 3056 aa8.09□□□□□ -1.11
LIN54-201ENST00000340417 COL12A1Q99715 3063 aa8.09□□□□□ -1.11
LIN54-201ENST00000340417 UBR5O95071 2799 aaPredicted RBP8.09□□□□□ -1.11
LIN54-201ENST00000340417 C1orf64Q8NEQ6 169 aa8.09□□□□□ -1.12
LIN54-201ENST00000340417 SMIM29Q86T20 159 aa8.08□□□□□ -1.12
LIN54-201ENST00000340417 TRAV7A0A075B6U4 112 aa8.07□□□□□ -1.12
LIN54-201ENST00000340417 LOC110117498A0A087WWA1 95 aa8.07□□□□□ -1.12
LIN54-201ENST00000340417 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
LIN54-201ENST00000340417 Q8N377 158 aa8.06□□□□□ -1.12
LIN54-201ENST00000340417 A8MWP4 228 aa8.06□□□□□ -1.12
LIN54-201ENST00000340417 Q6ZR54 194 aa8.05□□□□□ -1.12
LIN54-201ENST00000340417 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
LIN54-201ENST00000340417 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
LIN54-201ENST00000340417 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
LIN54-201ENST00000340417 DMXL1Q9Y485 3027 aa8.04□□□□□ -1.12
LIN54-201ENST00000340417 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
LIN54-201ENST00000340417 ITPR1Q14643 2758 aa8.03□□□□□ -1.12
LIN54-201ENST00000340417 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
LIN54-201ENST00000340417 Q6ZSA8 131 aa8.02□□□□□ -1.12
LIN54-201ENST00000340417 FAM229BQ4G0N7 80 aa8.02□□□□□ -1.13
LIN54-201ENST00000340417 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
LIN54-201ENST00000340417 MPLKIPQ8TAP9 179 aa8.01□□□□□ -1.13
LIN54-201ENST00000340417 UTP20O75691 2785 aaKnown RBP8.01□□□□□ -1.13
LIN54-201ENST00000340417 REV3LO60673 3130 aa8□□□□□ -1.13
LIN54-201ENST00000340417 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
LIN54-201ENST00000340417 M0R2T5 61 aa7.98□□□□□ -1.13
LIN54-201ENST00000340417 APCP25054 2843 aa7.97□□□□□ -1.13
LIN54-201ENST00000340417 COX7CP15954 63 aa7.97□□□□□ -1.13
LIN54-201ENST00000340417 C8orf17Q9NRJ1 99 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms