RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 SLC7A5P1Q8MH63 180 aa8.79□□□□□ -1
LINC01116-202ENST00000339037 ETDCA0A1B0GVM5 59 aa8.78□□□□□ -1
LINC01116-202ENST00000339037 DPM2O94777 84 aa8.78□□□□□ -1
LINC01116-202ENST00000339037 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
LINC01116-202ENST00000339037 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
LINC01116-202ENST00000339037 LOC107984156A0A0G2JMH3 177 aa8.77□□□□□ -1.01
LINC01116-202ENST00000339037 COLCA2A8K830 154 aa8.77□□□□□ -1.01
LINC01116-202ENST00000339037 ARL17AQ8IVW1 177 aa8.77□□□□□ -1.01
LINC01116-202ENST00000339037 IGKCP01834 107 aa8.76□□□□□ -1.01
LINC01116-202ENST00000339037 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
LINC01116-202ENST00000339037 LCE4AQ5TA78 99 aa8.76□□□□□ -1.01
LINC01116-202ENST00000339037 KRTAP4-1Q9BYQ7 146 aa8.76□□□□□ -1.01
LINC01116-202ENST00000339037 DDTP30046 118 aa8.75□□□□□ -1.01
LINC01116-202ENST00000339037 HERVK_113P61574 105 aa8.75□□□□□ -1.01
LINC01116-202ENST00000339037 TRBV10-2A0A0K0K1G8 114 aa8.74□□□□□ -1.01
LINC01116-202ENST00000339037 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
LINC01116-202ENST00000339037 NMUP48645 174 aa8.74□□□□□ -1.01
LINC01116-202ENST00000339037 MOBPQ13875 183 aa8.74□□□□□ -1.01
LINC01116-202ENST00000339037 GAGE2AQ6NT46 116 aa8.74□□□□□ -1.01
LINC01116-202ENST00000339037 IGLV9-49A0A0B4J1Y8 123 aa8.73□□□□□ -1.01
LINC01116-202ENST00000339037 KRTAP9-7A8MTY7 169 aa8.73□□□□□ -1.01
LINC01116-202ENST00000339037 ERC2-IT1O76042 136 aa8.73□□□□□ -1.01
LINC01116-202ENST00000339037 RPS29P62273 56 aaKnown RBP8.73□□□□□ -1.01
LINC01116-202ENST00000339037 S100A12P80511 92 aa8.73□□□□□ -1.01
LINC01116-202ENST00000339037 LCE3BQ5TA77 95 aa8.72□□□□□ -1.01
LINC01116-202ENST00000339037 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
LINC01116-202ENST00000339037 Q8N377 158 aa8.72□□□□□ -1.01
LINC01116-202ENST00000339037 Q9BRP9 147 aa8.72□□□□□ -1.01
LINC01116-202ENST00000339037 MIEN1Q9BRT3 115 aa8.72□□□□□ -1.01
LINC01116-202ENST00000339037 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
LINC01116-202ENST00000339037 NPC2P61916 151 aa8.71□□□□□ -1.02
LINC01116-202ENST00000339037 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
LINC01116-202ENST00000339037 A0A0J9YXY3 114 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 SLC25A20O43772 301 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 NDUFC2O95298 119 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 Q6ZRX8 168 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
LINC01116-202ENST00000339037 E9PLD3 99 aa8.69□□□□□ -1.02
LINC01116-202ENST00000339037 S100A7L2Q5SY68 101 aa8.69□□□□□ -1.02
LINC01116-202ENST00000339037 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BKO60814 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BJP06899 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BOP23527 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BBP33778 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BDP58876 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BCP62807 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST2H2BEQ16778 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BHQ93079 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BNQ99877 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 HIST1H2BMQ99879 126 aa8.67□□□□□ -1.02
LINC01116-202ENST00000339037 CRCT1Q9UGL9 99 aa8.65□□□□□ -1.02
LINC01116-202ENST00000339037 ZNF73O43830 326 aaPredicted RBP8.64□□□□□ -1.03
LINC01116-202ENST00000339037 LITAFQ99732 161 aa8.64□□□□□ -1.03
LINC01116-202ENST00000339037 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
LINC01116-202ENST00000339037 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
LINC01116-202ENST00000339037 JOSD1Q15040 202 aaPredicted RBP8.62□□□□□ -1.03
LINC01116-202ENST00000339037 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
LINC01116-202ENST00000339037 ST20-AS1Q8NBB2 130 aa8.61□□□□□ -1.03
LINC01116-202ENST00000339037 TTTY13Q9BZ97 58 aa8.61□□□□□ -1.03
LINC01116-202ENST00000339037 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
LINC01116-202ENST00000339037 TIMM17BO60830 172 aa8.59□□□□□ -1.03
LINC01116-202ENST00000339037 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
LINC01116-202ENST00000339037 ZNF815PA8K554 130 aa8.58□□□□□ -1.04
LINC01116-202ENST00000339037 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
LINC01116-202ENST00000339037 OR13C6PQ8NH95 151 aa8.57□□□□□ -1.04
LINC01116-202ENST00000339037 HINT1P49773 126 aaPredicted RBP8.55□□□□□ -1.04
LINC01116-202ENST00000339037 KRTAP19-2Q3LHN2 52 aa8.55□□□□□ -1.04
LINC01116-202ENST00000339037 CBY1Q9Y3M2 126 aa8.55□□□□□ -1.04
LINC01116-202ENST00000339037 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
LINC01116-202ENST00000339037 C5orf52A6NGY3 159 aa8.53□□□□□ -1.04
LINC01116-202ENST00000339037 KRTDAPP60985 99 aa8.53□□□□□ -1.04
LINC01116-202ENST00000339037 MT1HP80294 61 aa8.53□□□□□ -1.04
LINC01116-202ENST00000339037 PCOTHQ58A44 107 aa8.53□□□□□ -1.04
LINC01116-202ENST00000339037 LIMD2Q9BT23 127 aa8.53□□□□□ -1.04
LINC01116-202ENST00000339037 IGLV8-61A0A075B6I0 122 aa8.52□□□□□ -1.05
LINC01116-202ENST00000339037 CFC1BP0CG36 223 aa8.52□□□□□ -1.05
LINC01116-202ENST00000339037 SPRR1BP22528 89 aa8.52□□□□□ -1.05
LINC01116-202ENST00000339037 COA6Q5JTJ3 125 aaKnown RBP8.52□□□□□ -1.05
LINC01116-202ENST00000339037 ELOF1P60002 83 aaKnown RBP8.51□□□□□ -1.05
LINC01116-202ENST00000339037 DHRS4-AS1Q9P1J3 65 aa8.51□□□□□ -1.05
LINC01116-202ENST00000339037 C9orf92A6NGG3 77 aa8.5□□□□□ -1.05
LINC01116-202ENST00000339037 COX7BP24311 80 aa8.5□□□□□ -1.05
LINC01116-202ENST00000339037 C6orf99Q4VX62 202 aa8.5□□□□□ -1.05
LINC01116-202ENST00000339037 KRTAP9-9Q9BYP9 154 aa8.5□□□□□ -1.05
LINC01116-202ENST00000339037 KRTAP9-4Q9BYQ2 154 aa8.5□□□□□ -1.05
LINC01116-202ENST00000339037 SLC25A34Q6PIV7 304 aa8.49□□□□□ -1.05
LINC01116-202ENST00000339037 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
LINC01116-202ENST00000339037 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
LINC01116-202ENST00000339037 LINC00518Q8N0U6 118 aa8.49□□□□□ -1.05
LINC01116-202ENST00000339037 ATOH7Q8N100 152 aa8.48□□□□□ -1.05
LINC01116-202ENST00000339037 C20orf202A1L168 122 aa8.46□□□□□ -1.06
LINC01116-202ENST00000339037 Q1RN00 199 aa8.45□□□□□ -1.06
LINC01116-202ENST00000339037 PCP2Q8IVA1 136 aa8.45□□□□□ -1.06
LINC01116-202ENST00000339037 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
LINC01116-202ENST00000339037 DEFB105AQ8NG35 78 aa8.44□□□□□ -1.06
LINC01116-202ENST00000339037 IFITM1P13164 125 aa8.43□□□□□ -1.06
LINC01116-202ENST00000339037 TAL2Q16559 108 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms