RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 LINC01600Q96MT4 127 aa9.95□□□□□ -0.82
LIMS1-202ENST00000338045 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 SERTAD4-AS1Q5TG53 156 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 Q8N814 137 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 DPH3Q96FX2 82 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 FAM218AQ96MZ4 157 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 A0A087WTM6 91 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 C1orf134Q5TEV5 83 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
LIMS1-202ENST00000338045 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
LIMS1-202ENST00000338045 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
LIMS1-202ENST00000338045 C16orf90A8MZG2 172 aa9.92□□□□□ -0.82
LIMS1-202ENST00000338045 TRACP01848 142 aa9.92□□□□□ -0.82
LIMS1-202ENST00000338045 ANKRD29Q8N6D5 301 aa9.92□□□□□ -0.82
LIMS1-202ENST00000338045 KRTAP7-1Q8IUC3 87 aa9.91□□□□□ -0.82
LIMS1-202ENST00000338045 SLC25A20O43772 301 aa9.91□□□□□ -0.82
LIMS1-202ENST00000338045 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
LIMS1-202ENST00000338045 A0A096LNI7 61 aa9.9□□□□□ -0.82
LIMS1-202ENST00000338045 NKAPP1Q8N9T2 125 aa9.9□□□□□ -0.82
LIMS1-202ENST00000338045 PKIGQ9Y2B9 76 aa9.9□□□□□ -0.82
LIMS1-202ENST00000338045 TRAV23DV6A0A075B6W5 121 aa9.89□□□□□ -0.83
LIMS1-202ENST00000338045 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
LIMS1-202ENST00000338045 FAM168BA1KXE4 195 aa9.89□□□□□ -0.83
LIMS1-202ENST00000338045 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
LIMS1-202ENST00000338045 COX7CP15954 63 aa9.89□□□□□ -0.83
LIMS1-202ENST00000338045 A0A087WYN8 130 aa9.88□□□□□ -0.83
LIMS1-202ENST00000338045 C7orf33Q8WU49 177 aa9.88□□□□□ -0.83
LIMS1-202ENST00000338045 H3BT86 120 aa9.87□□□□□ -0.83
LIMS1-202ENST00000338045 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
LIMS1-202ENST00000338045 ZNF73O43830 326 aaPredicted RBP9.86□□□□□ -0.83
LIMS1-202ENST00000338045 DIRC1Q969H9 104 aa9.86□□□□□ -0.83
LIMS1-202ENST00000338045 C22orf24Q9Y442 160 aa9.86□□□□□ -0.83
LIMS1-202ENST00000338045 KCNQ1DNQ9H478 68 aa9.85□□□□□ -0.83
LIMS1-202ENST00000338045 IGKV2-24A0A0C4DH68 120 aa9.85□□□□□ -0.83
LIMS1-202ENST00000338045 TRBV7-6A0A0J9YX20 115 aa9.85□□□□□ -0.83
LIMS1-202ENST00000338045 FAM236DA0A1B0GTK5 79 aa9.84□□□□□ -0.83
LIMS1-202ENST00000338045 FAM236CP0DP71 79 aa9.84□□□□□ -0.83
LIMS1-202ENST00000338045 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
LIMS1-202ENST00000338045 FAM19A1Q7Z5A9 133 aa9.83□□□□□ -0.84
LIMS1-202ENST00000338045 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
LIMS1-202ENST00000338045 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
LIMS1-202ENST00000338045 A0A1W2PNN7 141 aa9.83□□□□□ -0.84
LIMS1-202ENST00000338045 LINC00167Q96N53 147 aa9.83□□□□□ -0.84
LIMS1-202ENST00000338045 DNAL4O96015 105 aa9.82□□□□□ -0.84
LIMS1-202ENST00000338045 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
LIMS1-202ENST00000338045 LINC00474Q9P2X8 69 aa9.82□□□□□ -0.84
LIMS1-202ENST00000338045 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
LIMS1-202ENST00000338045 RTL8CO15255 209 aa9.81□□□□□ -0.84
LIMS1-202ENST00000338045 HYDINQ4G0P3 5121 aa9.81□□□□□ -0.84
LIMS1-202ENST00000338045 SACSQ9NZJ4 4579 aa9.8□□□□□ -0.84
LIMS1-202ENST00000338045 OXTP01178 125 aa9.8□□□□□ -0.84
LIMS1-202ENST00000338045 COX7BP24311 80 aa9.8□□□□□ -0.84
LIMS1-202ENST00000338045 TNP2Q05952 138 aa9.8□□□□□ -0.84
LIMS1-202ENST00000338045 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
LIMS1-202ENST00000338045 PRYO14603 147 aa9.79□□□□□ -0.84
LIMS1-202ENST00000338045 BAALC-AS2P0C853 105 aa9.79□□□□□ -0.84
LIMS1-202ENST00000338045 SPRR1AP35321 89 aa9.79□□□□□ -0.84
LIMS1-202ENST00000338045 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
LIMS1-202ENST00000338045 LINC00528Q8N1L1 170 aa9.78□□□□□ -0.84
LIMS1-202ENST00000338045 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
LIMS1-202ENST00000338045 KRTAP4-16G5E9R7 235 aaPredicted RBP9.77□□□□□ -0.85
LIMS1-202ENST00000338045 PANO1I0J062 215 aa9.77□□□□□ -0.85
LIMS1-202ENST00000338045 ATOX1O00244 68 aa9.77□□□□□ -0.85
LIMS1-202ENST00000338045 C4orf48Q5BLP8 95 aa9.77□□□□□ -0.85
LIMS1-202ENST00000338045 HECTD4Q9Y4D8 3996 aa9.76□□□□□ -0.85
LIMS1-202ENST00000338045 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
LIMS1-202ENST00000338045 CD164Q04900 197 aa9.76□□□□□ -0.85
LIMS1-202ENST00000338045 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
LIMS1-202ENST00000338045 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
LIMS1-202ENST00000338045 ORMDL1Q9P0S3 153 aa9.76□□□□□ -0.85
LIMS1-202ENST00000338045 IGLV5-52A0A0A0MRZ9 124 aa9.75□□□□□ -0.85
LIMS1-202ENST00000338045 ACYP1P07311 99 aa9.75□□□□□ -0.85
LIMS1-202ENST00000338045 DNAH11Q96DT5 4516 aa9.74□□□□□ -0.85
LIMS1-202ENST00000338045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.74□□□□□ -0.85
LIMS1-202ENST00000338045 LCE6AA0A183 80 aa9.73□□□□□ -0.85
LIMS1-202ENST00000338045 FAT2Q9NYQ8 4349 aa9.72□□□□□ -0.85
LIMS1-202ENST00000338045 TEX49A0A1B0GTD5 131 aa9.72□□□□□ -0.85
LIMS1-202ENST00000338045 INAFM2P0DMQ5 153 aa9.72□□□□□ -0.85
LIMS1-202ENST00000338045 REG3GQ6UW15 175 aa9.72□□□□□ -0.85
LIMS1-202ENST00000338045 Q6ZRX8 168 aa9.72□□□□□ -0.85
LIMS1-202ENST00000338045 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
LIMS1-202ENST00000338045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.71□□□□□ -0.85
LIMS1-202ENST00000338045 ETDCA0A1B0GVM5 59 aa9.7□□□□□ -0.86
LIMS1-202ENST00000338045 TMEM256-PLSCR3K7ERE1 68 aa9.7□□□□□ -0.86
LIMS1-202ENST00000338045 Q6ZQY7 126 aa9.7□□□□□ -0.86
LIMS1-202ENST00000338045 DSCR8Q96T75 97 aa9.7□□□□□ -0.86
LIMS1-202ENST00000338045 HIST1H4AP62805 103 aaKnown RBP9.7□□□□□ -0.86
LIMS1-202ENST00000338045 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
LIMS1-202ENST00000338045 SERP1Q9Y6X1 66 aa9.69□□□□□ -0.86
LIMS1-202ENST00000338045 LINC00643Q86TS7 51 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 DNAH5Q8TE73 4624 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 H3BQ85 93 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 OBSCN-AS1Q96MR7 158 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 Q9BRP9 147 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 DHRS4-AS1Q9P1J3 65 aa9.68□□□□□ -0.86
LIMS1-202ENST00000338045 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
LIMS1-202ENST00000338045 UBE2BP63146 152 aa9.66□□□□□ -0.86
LIMS1-202ENST00000338045 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms