RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 PKD1P98161 4303 aa9.31□□□□□ -0.92
CBX3-201ENST00000337620 LST1O00453 97 aa9.31□□□□□ -0.92
CBX3-201ENST00000337620 MTURNQ8N3F0 131 aa9.31□□□□□ -0.92
CBX3-201ENST00000337620 FAM218AQ96MZ4 157 aa9.31□□□□□ -0.92
CBX3-201ENST00000337620 DNAH5Q8TE73 4624 aa9.31□□□□□ -0.92
CBX3-201ENST00000337620 SPACA4Q8TDM5 124 aa9.3□□□□□ -0.92
CBX3-201ENST00000337620 DIRC1Q969H9 104 aa9.3□□□□□ -0.92
CBX3-201ENST00000337620 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
CBX3-201ENST00000337620 KCNQ1DNQ9H478 68 aa9.29□□□□□ -0.92
CBX3-201ENST00000337620 A0A087WYN8 130 aa9.28□□□□□ -0.92
CBX3-201ENST00000337620 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
CBX3-201ENST00000337620 C9JAW5 83 aa9.27□□□□□ -0.93
CBX3-201ENST00000337620 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
CBX3-201ENST00000337620 LINC00336Q6ZUF6 198 aa9.26□□□□□ -0.93
CBX3-201ENST00000337620 F8W1H4 67 aa9.25□□□□□ -0.93
CBX3-201ENST00000337620 PRYO14603 147 aa9.25□□□□□ -0.93
CBX3-201ENST00000337620 COX7BP24311 80 aa9.25□□□□□ -0.93
CBX3-201ENST00000337620 UBE2BP63146 152 aa9.25□□□□□ -0.93
CBX3-201ENST00000337620 TRACP01848 142 aa9.24□□□□□ -0.93
CBX3-201ENST00000337620 PRO0461Q9UI25 63 aa9.24□□□□□ -0.93
CBX3-201ENST00000337620 TRBV7-6A0A0J9YX20 115 aa9.23□□□□□ -0.93
CBX3-201ENST00000337620 DNAL4O96015 105 aa9.23□□□□□ -0.93
CBX3-201ENST00000337620 ELOF1P60002 83 aaKnown RBP9.23□□□□□ -0.93
CBX3-201ENST00000337620 LINC00575Q6W349 94 aa9.23□□□□□ -0.93
CBX3-201ENST00000337620 SLC25A20O43772 301 aa9.22□□□□□ -0.93
CBX3-201ENST00000337620 REG3GQ6UW15 175 aa9.22□□□□□ -0.93
CBX3-201ENST00000337620 DNAH8Q96JB1 4490 aa9.22□□□□□ -0.93
CBX3-201ENST00000337620 SNCGO76070 127 aa9.22□□□□□ -0.93
CBX3-201ENST00000337620 ETDCA0A1B0GVM5 59 aa9.21□□□□□ -0.94
CBX3-201ENST00000337620 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
CBX3-201ENST00000337620 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 SPRR1AP35321 89 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 KRTAP11-1Q8IUC1 163 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 A0A1B0GX51 115 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 KRTAP10-1P60331 282 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 PLAC8Q9NZF1 115 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
CBX3-201ENST00000337620 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
CBX3-201ENST00000337620 KRTAP4-16G5E9R7 235 aaPredicted RBP9.19□□□□□ -0.94
CBX3-201ENST00000337620 B5MCH6 92 aa9.18□□□□□ -0.94
CBX3-201ENST00000337620 ANKRD29Q8N6D5 301 aa9.18□□□□□ -0.94
CBX3-201ENST00000337620 BAALC-AS2P0C853 105 aa9.17□□□□□ -0.94
CBX3-201ENST00000337620 Q6ZRX8 168 aa9.17□□□□□ -0.94
CBX3-201ENST00000337620 ETDBQ3ZM63 59 aa9.16□□□□□ -0.94
CBX3-201ENST00000337620 PKHD1P08F94 4074 aa9.16□□□□□ -0.94
CBX3-201ENST00000337620 H3BT86 120 aa9.16□□□□□ -0.94
CBX3-201ENST00000337620 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
CBX3-201ENST00000337620 ORMDL1Q9P0S3 153 aa9.15□□□□□ -0.94
CBX3-201ENST00000337620 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 Q6ZQY7 126 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 CIRBP-AS1Q8TBR5 109 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 RYR3Q15413 4870 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 A0A1B0GV72 72 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 Q6ZSA8 131 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 Q9BRP9 147 aa9.14□□□□□ -0.95
CBX3-201ENST00000337620 PRLHP81277 87 aa9.13□□□□□ -0.95
CBX3-201ENST00000337620 DHRS4-AS1Q9P1J3 65 aa9.13□□□□□ -0.95
CBX3-201ENST00000337620 HAMPP81172 84 aa9.13□□□□□ -0.95
CBX3-201ENST00000337620 SCXQ7RTU7 201 aa9.13□□□□□ -0.95
CBX3-201ENST00000337620 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.11□□□□□ -0.95
CBX3-201ENST00000337620 LINC01600Q96MT4 127 aa9.11□□□□□ -0.95
CBX3-201ENST00000337620 TEN1Q86WV5 123 aa9.1□□□□□ -0.95
CBX3-201ENST00000337620 LRP1BQ9NZR2 4599 aa9.1□□□□□ -0.95
CBX3-201ENST00000337620 BCE1O60756 84 aa9.1□□□□□ -0.95
CBX3-201ENST00000337620 UBE2AP49459 152 aa9.1□□□□□ -0.95
CBX3-201ENST00000337620 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
CBX3-201ENST00000337620 TMEM256-PLSCR3K7ERE1 68 aa9.09□□□□□ -0.95
CBX3-201ENST00000337620 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
CBX3-201ENST00000337620 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
CBX3-201ENST00000337620 ERC2-IT1O76042 136 aa9.08□□□□□ -0.96
CBX3-201ENST00000337620 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
CBX3-201ENST00000337620 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
CBX3-201ENST00000337620 TEX49A0A1B0GTD5 131 aa9.07□□□□□ -0.96
CBX3-201ENST00000337620 DEFB105AQ8NG35 78 aa9.07□□□□□ -0.96
CBX3-201ENST00000337620 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
CBX3-201ENST00000337620 H0Y9J4 135 aa9.06□□□□□ -0.96
CBX3-201ENST00000337620 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
CBX3-201ENST00000337620 GHRHP01286 108 aa9.05□□□□□ -0.96
CBX3-201ENST00000337620 H3BQ85 93 aa9.04□□□□□ -0.96
CBX3-201ENST00000337620 PPDPFLQ8WWR9 84 aa9.04□□□□□ -0.96
CBX3-201ENST00000337620 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
CBX3-201ENST00000337620 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
CBX3-201ENST00000337620 KRTAP13-1Q8IUC0 172 aa9.02□□□□□ -0.96
CBX3-201ENST00000337620 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
CBX3-201ENST00000337620 Q8N377 158 aa9.01□□□□□ -0.97
CBX3-201ENST00000337620 J3QR89 54 aa8.99□□□□□ -0.97
CBX3-201ENST00000337620 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
CBX3-201ENST00000337620 JMJD7-PLA2G4BH0Y9G9 81 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 ZNF861PO60384 105 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 NDUFV3P56181 108 aaKnown RBP8.98□□□□□ -0.97
CBX3-201ENST00000337620 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 XGP55808 180 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 C3orf22Q8N5N4 141 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 OBSCN-AS1Q96MR7 158 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 C14orf132Q9NPU4 83 aa8.98□□□□□ -0.97
CBX3-201ENST00000337620 APOBP04114 4563 aaKnown RBP8.97□□□□□ -0.97
CBX3-201ENST00000337620 RBM3P98179 157 aaKnown RBP8.96□□□□□ -0.98
CBX3-201ENST00000337620 GAGE2AQ6NT46 116 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms