RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 PRR34Q9NV39 138 aa9.17□□□□□ -0.94
RTN4-202ENST00000337526 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
RTN4-202ENST00000337526 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
RTN4-202ENST00000337526 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
RTN4-202ENST00000337526 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
RTN4-202ENST00000337526 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
RTN4-202ENST00000337526 TRIOO75962 3097 aa9.16□□□□□ -0.94
RTN4-202ENST00000337526 SPACA4Q8TDM5 124 aa9.16□□□□□ -0.94
RTN4-202ENST00000337526 K7EQZ3 153 aa9.14□□□□□ -0.95
RTN4-202ENST00000337526 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
RTN4-202ENST00000337526 MGAQ8IWI9 3026 aa9.14□□□□□ -0.95
RTN4-202ENST00000337526 CHD6Q8TD26 2715 aa9.14□□□□□ -0.95
RTN4-202ENST00000337526 ACYP2P14621 99 aa9.14□□□□□ -0.95
RTN4-202ENST00000337526 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
RTN4-202ENST00000337526 IGLV1-50A0A075B6I6 118 aa9.13□□□□□ -0.95
RTN4-202ENST00000337526 A0A1B0GU69 56 aa9.13□□□□□ -0.95
RTN4-202ENST00000337526 ERC2-IT1O76042 136 aa9.12□□□□□ -0.95
RTN4-202ENST00000337526 LINC00612Q8N6U2 182 aa9.11□□□□□ -0.95
RTN4-202ENST00000337526 KLKP1Q107X0 134 aa9.11□□□□□ -0.95
RTN4-202ENST00000337526 C9orf129Q5T035 196 aaKnown RBP9.1□□□□□ -0.95
RTN4-202ENST00000337526 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
RTN4-202ENST00000337526 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
RTN4-202ENST00000337526 MAP1AP78559 2803 aaPredicted RBP9.09□□□□□ -0.95
RTN4-202ENST00000337526 A8MWP4 228 aa9.09□□□□□ -0.95
RTN4-202ENST00000337526 C15orf56Q8N910 161 aa9.09□□□□□ -0.95
RTN4-202ENST00000337526 WDFY4Q6ZS81 3184 aa9.09□□□□□ -0.95
RTN4-202ENST00000337526 BAHCC1Q9P281 2608 aa9.09□□□□□ -0.96
RTN4-202ENST00000337526 Q8N377 158 aa9.08□□□□□ -0.96
RTN4-202ENST00000337526 RTL8CO15255 209 aa9.08□□□□□ -0.96
RTN4-202ENST00000337526 DSPP15924 2871 aaKnown RBP9.06□□□□□ -0.96
RTN4-202ENST00000337526 LINC00313P59037 77 aa9.05□□□□□ -0.96
RTN4-202ENST00000337526 IGFL1Q6UW32 110 aa9.05□□□□□ -0.96
RTN4-202ENST00000337526 H7BZZ5 65 aa9.03□□□□□ -0.96
RTN4-202ENST00000337526 A8MUN3 132 aa9.03□□□□□ -0.96
RTN4-202ENST00000337526 TEP1Q99973 2627 aaKnown RBP9.02□□□□□ -0.97
RTN4-202ENST00000337526 SETXQ7Z333 2677 aaKnown RBP9.02□□□□□ -0.97
RTN4-202ENST00000337526 LOC101927531A0A1B0GV80 90 aa9.01□□□□□ -0.97
RTN4-202ENST00000337526 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
RTN4-202ENST00000337526 PRR15Q8IV56 129 aa9.01□□□□□ -0.97
RTN4-202ENST00000337526 MRPL34Q9BQ48 92 aaKnown RBP9.01□□□□□ -0.97
RTN4-202ENST00000337526 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
RTN4-202ENST00000337526 A0A0G2JQZ4 141 aa9□□□□□ -0.97
RTN4-202ENST00000337526 A0A1W2PNN7 141 aa9□□□□□ -0.97
RTN4-202ENST00000337526 KRTAP10-11P60412 298 aa9□□□□□ -0.97
RTN4-202ENST00000337526 SZT2Q5T011 3432 aa9□□□□□ -0.97
RTN4-202ENST00000337526 IGSF10Q6WRI0 2623 aa9□□□□□ -0.97
RTN4-202ENST00000337526 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
RTN4-202ENST00000337526 STAB1Q9NY15 2570 aa8.99□□□□□ -0.97
RTN4-202ENST00000337526 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
RTN4-202ENST00000337526 COA5Q86WW8 74 aa8.97□□□□□ -0.97
RTN4-202ENST00000337526 TLX1NBP0CAT3 122 aa8.97□□□□□ -0.97
RTN4-202ENST00000337526 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
RTN4-202ENST00000337526 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
RTN4-202ENST00000337526 IGLV8-61A0A075B6I0 122 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 K7EIL1 84 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 TEX15Q9BXT5 2789 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 A0A1W2PNM2 257 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 PLA2G2DQ9UNK4 145 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 LINC00336Q6ZUF6 198 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 FAM104AQ969W3 186 aa8.95□□□□□ -0.98
RTN4-202ENST00000337526 C8orf87E5RJ46 101 aa8.94□□□□□ -0.98
RTN4-202ENST00000337526 VPS13AQ96RL7 3174 aa8.94□□□□□ -0.98
RTN4-202ENST00000337526 OBSCN-AS1Q96MR7 158 aa8.93□□□□□ -0.98
RTN4-202ENST00000337526 C8orf17Q9NRJ1 99 aa8.93□□□□□ -0.98
RTN4-202ENST00000337526 C9orf163Q8N9P6 203 aa8.93□□□□□ -0.98
RTN4-202ENST00000337526 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
RTN4-202ENST00000337526 NOTCH1P46531 2555 aa8.92□□□□□ -0.98
RTN4-202ENST00000337526 UNC79Q9P2D8 2635 aa8.92□□□□□ -0.98
RTN4-202ENST00000337526 CR1P17927 2039 aa8.92□□□□□ -0.98
RTN4-202ENST00000337526 KRTAP1-3Q8IUG1 177 aa8.92□□□□□ -0.98
RTN4-202ENST00000337526 Q96NJ1 140 aa8.91□□□□□ -0.98
RTN4-202ENST00000337526 GCN1Q92616 2671 aaKnown RBP8.91□□□□□ -0.98
RTN4-202ENST00000337526 COL6A3P12111 3177 aa8.9□□□□□ -0.98
RTN4-202ENST00000337526 CASC10Q5T4H9 136 aa8.9□□□□□ -0.98
RTN4-202ENST00000337526 ZNF861PO60384 105 aa8.89□□□□□ -0.99
RTN4-202ENST00000337526 PLA2G1BP04054 148 aaKnown RBP8.89□□□□□ -0.99
RTN4-202ENST00000337526 A0A1B0GVX0 72 aa8.88□□□□□ -0.99
RTN4-202ENST00000337526 IGLV5-48A0A075B6I7 105 aa8.88□□□□□ -0.99
RTN4-202ENST00000337526 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
RTN4-202ENST00000337526 KRTAP1-1Q07627 177 aa8.86□□□□□ -0.99
RTN4-202ENST00000337526 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
RTN4-202ENST00000337526 FRYQ5TBA9 3013 aa8.85□□□□□ -0.99
RTN4-202ENST00000337526 DSCR10P59022 87 aa8.85□□□□□ -0.99
RTN4-202ENST00000337526 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
RTN4-202ENST00000337526 LAMA1P25391 3075 aa8.84□□□□□ -0.99
RTN4-202ENST00000337526 FREM2Q5SZK8 3169 aa8.84□□□□□ -0.99
RTN4-202ENST00000337526 UQCR11O14957 56 aa8.84□□□□□ -1
RTN4-202ENST00000337526 A0A087WTM6 91 aa8.83□□□□□ -1
RTN4-202ENST00000337526 COL6A5A8TX70 2615 aa8.82□□□□□ -1
RTN4-202ENST00000337526 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
RTN4-202ENST00000337526 WWC2-AS2Q96NR7 200 aa8.81□□□□□ -1
RTN4-202ENST00000337526 OCR1Q9BZK8 76 aa8.8□□□□□ -1
RTN4-202ENST00000337526 VCANP13611 3396 aa8.8□□□□□ -1
RTN4-202ENST00000337526 NBEAL2Q6ZNJ1 2754 aa8.79□□□□□ -1
RTN4-202ENST00000337526 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
RTN4-202ENST00000337526 DNAH14Q0VDD8 3507 aa8.78□□□□□ -1
RTN4-202ENST00000337526 IGLV5-37A0A075B6J1 123 aa8.78□□□□□ -1
RTN4-202ENST00000337526 SPRR4Q96PI1 79 aa8.78□□□□□ -1
RTN4-202ENST00000337526 UBR5O95071 2799 aaPredicted RBP8.76□□□□□ -1.01
RTN4-202ENST00000337526 SPANXA2-OT1Q8N9U9 137 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms