RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 Q96NJ1 140 aa8.28□□□□□ -1.08
FN1-202ENST00000336916 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
FN1-202ENST00000336916 CSNK1G2-AS1Q8NCQ2 148 aa8.26□□□□□ -1.09
FN1-202ENST00000336916 ZNF861PO60384 105 aa8.26□□□□□ -1.09
FN1-202ENST00000336916 ST20-AS1Q8NBB2 130 aa8.26□□□□□ -1.09
FN1-202ENST00000336916 TEP1Q99973 2627 aaKnown RBP8.26□□□□□ -1.09
FN1-202ENST00000336916 TLX1NBP0CAT3 122 aa8.25□□□□□ -1.09
FN1-202ENST00000336916 PCNTO95613 3336 aa8.25□□□□□ -1.09
FN1-202ENST00000336916 CHTF8P0CG12 524 aa8.25□□□□□ -1.09
FN1-202ENST00000336916 TRANK1O15050 2925 aa8.24□□□□□ -1.09
FN1-202ENST00000336916 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
FN1-202ENST00000336916 ZNF292O60281 2723 aa8.23□□□□□ -1.09
FN1-202ENST00000336916 PRR34Q9NV39 138 aa8.23□□□□□ -1.09
FN1-202ENST00000336916 C19orf73Q9NVV2 129 aa8.23□□□□□ -1.09
FN1-202ENST00000336916 VPREB1P12018 145 aa8.23□□□□□ -1.09
FN1-202ENST00000336916 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
FN1-202ENST00000336916 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
FN1-202ENST00000336916 NOTCH1P46531 2555 aa8.21□□□□□ -1.1
FN1-202ENST00000336916 PRO0628Q9UI54 55 aa8.21□□□□□ -1.1
FN1-202ENST00000336916 CYP4F30PQ9H0H9 118 aa8.21□□□□□ -1.1
FN1-202ENST00000336916 TM2D3Q9BRN9 247 aa8.2□□□□□ -1.1
FN1-202ENST00000336916 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
FN1-202ENST00000336916 SETXQ7Z333 2677 aaKnown RBP8.19□□□□□ -1.1
FN1-202ENST00000336916 CDIP1Q9H305 208 aa8.19□□□□□ -1.1
FN1-202ENST00000336916 IGLV1-50A0A075B6I6 118 aa8.19□□□□□ -1.1
FN1-202ENST00000336916 K7EIL1 84 aa8.19□□□□□ -1.1
FN1-202ENST00000336916 LAMA2P24043 3122 aaKnown RBP8.18□□□□□ -1.1
FN1-202ENST00000336916 BAHCC1Q9P281 2608 aa8.18□□□□□ -1.1
FN1-202ENST00000336916 CFAP54Q96N23 3096 aa8.17□□□□□ -1.1
FN1-202ENST00000336916 UQCR11O14957 56 aa8.16□□□□□ -1.1
FN1-202ENST00000336916 CNBPP62633 177 aaKnown RBP8.16□□□□□ -1.1
FN1-202ENST00000336916 STAB2Q8WWQ8 2551 aa8.15□□□□□ -1.1
FN1-202ENST00000336916 A0A087WTM6 91 aa8.15□□□□□ -1.1
FN1-202ENST00000336916 C9orf163Q8N9P6 203 aa8.15□□□□□ -1.1
FN1-202ENST00000336916 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
FN1-202ENST00000336916 A0A1B0GVX0 72 aa8.14□□□□□ -1.11
FN1-202ENST00000336916 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
FN1-202ENST00000336916 MAP1AP78559 2803 aaPredicted RBP8.14□□□□□ -1.11
FN1-202ENST00000336916 LINC00528Q8N1L1 170 aa8.14□□□□□ -1.11
FN1-202ENST00000336916 LINC00612Q8N6U2 182 aa8.13□□□□□ -1.11
FN1-202ENST00000336916 A0A0C4DFX4 3053 aa8.11□□□□□ -1.11
FN1-202ENST00000336916 KRTAP10-11P60412 298 aa8.11□□□□□ -1.11
FN1-202ENST00000336916 PRO0461Q9UI25 63 aa8.1□□□□□ -1.11
FN1-202ENST00000336916 C15orf56Q8N910 161 aa8.09□□□□□ -1.11
FN1-202ENST00000336916 CRIPTQ9P021 101 aa8.09□□□□□ -1.11
FN1-202ENST00000336916 A0A096LNT2 108 aa8.09□□□□□ -1.11
FN1-202ENST00000336916 FAM168BA1KXE4 195 aa8.09□□□□□ -1.11
FN1-202ENST00000336916 CD164Q04900 197 aa8.09□□□□□ -1.11
FN1-202ENST00000336916 IGLV7-43P04211 117 aa8.09□□□□□ -1.12
FN1-202ENST00000336916 LINC01600Q96MT4 127 aa8.08□□□□□ -1.12
FN1-202ENST00000336916 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
FN1-202ENST00000336916 Q9UF83 564 aa8.08□□□□□ -1.12
FN1-202ENST00000336916 C8orf17Q9NRJ1 99 aa8.07□□□□□ -1.12
FN1-202ENST00000336916 K7EQZ3 153 aa8.07□□□□□ -1.12
FN1-202ENST00000336916 IGFL1Q6UW32 110 aa8.07□□□□□ -1.12
FN1-202ENST00000336916 CHD7Q9P2D1 2997 aa8.07□□□□□ -1.12
FN1-202ENST00000336916 LITAFQ99732 161 aa8.06□□□□□ -1.12
FN1-202ENST00000336916 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
FN1-202ENST00000336916 ZNF575Q86XF7 245 aa8.05□□□□□ -1.12
FN1-202ENST00000336916 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
FN1-202ENST00000336916 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
FN1-202ENST00000336916 SPANXA2-OT1Q8N9U9 137 aa8.04□□□□□ -1.12
FN1-202ENST00000336916 OBSCN-AS1Q96MR7 158 aa8.04□□□□□ -1.12
FN1-202ENST00000336916 COA5Q86WW8 74 aa8.04□□□□□ -1.12
FN1-202ENST00000336916 A8MUN3 132 aa8.04□□□□□ -1.12
FN1-202ENST00000336916 KLKP1Q107X0 134 aa8.03□□□□□ -1.12
FN1-202ENST00000336916 IGLV5-37A0A075B6J1 123 aa8.03□□□□□ -1.12
FN1-202ENST00000336916 SPINT4Q6UDR6 99 aa8.01□□□□□ -1.13
FN1-202ENST00000336916 Q8N377 158 aa8.01□□□□□ -1.13
FN1-202ENST00000336916 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
FN1-202ENST00000336916 SPRR4Q96PI1 79 aa8□□□□□ -1.13
FN1-202ENST00000336916 APCP25054 2843 aa8□□□□□ -1.13
FN1-202ENST00000336916 NSD1Q96L73 2696 aaPredicted RBP7.99□□□□□ -1.13
FN1-202ENST00000336916 FAM229BQ4G0N7 80 aa7.99□□□□□ -1.13
FN1-202ENST00000336916 APLNQ9ULZ1 77 aa7.98□□□□□ -1.13
FN1-202ENST00000336916 VPS13AQ96RL7 3174 aa7.98□□□□□ -1.13
FN1-202ENST00000336916 GIG44P09565 113 aaPredicted RBP7.98□□□□□ -1.13
FN1-202ENST00000336916 IGLV8-61A0A075B6I0 122 aa7.98□□□□□ -1.13
FN1-202ENST00000336916 MIR22HGQ0VDD5 57 aa7.98□□□□□ -1.13
FN1-202ENST00000336916 DSCR10P59022 87 aa7.96□□□□□ -1.13
FN1-202ENST00000336916 WIPF1O43516 503 aa7.96□□□□□ -1.14
FN1-202ENST00000336916 DSPP15924 2871 aaKnown RBP7.92□□□□□ -1.14
FN1-202ENST00000336916 FAM104AQ969W3 186 aa7.91□□□□□ -1.14
FN1-202ENST00000336916 C9orf92A6NGG3 77 aa7.91□□□□□ -1.14
FN1-202ENST00000336916 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
FN1-202ENST00000336916 IGLV5-48A0A075B6I7 105 aa7.89□□□□□ -1.15
FN1-202ENST00000336916 KRTAP1-3Q8IUG1 177 aa7.89□□□□□ -1.15
FN1-202ENST00000336916 Q6ZSA8 131 aa7.89□□□□□ -1.15
FN1-202ENST00000336916 IGSF10Q6WRI0 2623 aa7.88□□□□□ -1.15
FN1-202ENST00000336916 KRTAP10-3P60369 221 aa7.88□□□□□ -1.15
FN1-202ENST00000336916 FRYLO94915 3013 aa7.87□□□□□ -1.15
FN1-202ENST00000336916 C4orf26Q17RF5 130 aa7.86□□□□□ -1.15
FN1-202ENST00000336916 HRES1P13985 223 aa7.86□□□□□ -1.15
FN1-202ENST00000336916 CASC10Q5T4H9 136 aa7.85□□□□□ -1.15
FN1-202ENST00000336916 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
FN1-202ENST00000336916 MKI67P46013 3256 aaKnown RBP7.84□□□□□ -1.15
FN1-202ENST00000336916 SMR3BP02814 79 aaPredicted RBP7.84□□□□□ -1.15
FN1-202ENST00000336916 A0A1W2PNN7 141 aa7.84□□□□□ -1.15
FN1-202ENST00000336916 PRUNE2Q8WUY3 3088 aa7.83□□□□□ -1.16
FN1-202ENST00000336916 KRTAP1-1Q07627 177 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms