RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 Q8N377 158 aa13.77□□□□□ -0.2
KDM3B-201ENST00000314358 LINC00336Q6ZUF6 198 aa13.77□□□□□ -0.21
KDM3B-201ENST00000314358 KCNQ1DNQ9H478 68 aa13.76□□□□□ -0.21
KDM3B-201ENST00000314358 LINC00528Q8N1L1 170 aa13.76□□□□□ -0.21
KDM3B-201ENST00000314358 USP9XQ93008 2570 aaPredicted RBP13.75□□□□□ -0.21
KDM3B-201ENST00000314358 PKD1L2Q7Z442 2459 aa13.75□□□□□ -0.21
KDM3B-201ENST00000314358 ZNF575Q86XF7 245 aa13.72□□□□□ -0.21
KDM3B-201ENST00000314358 IGLV5-48A0A075B6I7 105 aa13.7□□□□□ -0.22
KDM3B-201ENST00000314358 ERC2-IT1O76042 136 aa13.7□□□□□ -0.22
KDM3B-201ENST00000314358 ZNF861PO60384 105 aa13.69□□□□□ -0.22
KDM3B-201ENST00000314358 K7EIL1 84 aa13.69□□□□□ -0.22
KDM3B-201ENST00000314358 PCSK5Q92824 1860 aa13.68□□□□□ -0.22
KDM3B-201ENST00000314358 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
KDM3B-201ENST00000314358 KLK9Q2XQG4 91 aa13.67□□□□□ -0.22
KDM3B-201ENST00000314358 ANKRD11Q6UB99 2663 aaPredicted RBP13.67□□□□□ -0.22
KDM3B-201ENST00000314358 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
KDM3B-201ENST00000314358 KRTAP10-3P60369 221 aa13.66□□□□□ -0.22
KDM3B-201ENST00000314358 CSNK1G2-AS1Q8NCQ2 148 aa13.65□□□□□ -0.22
KDM3B-201ENST00000314358 CDC42SE1Q9NRR8 79 aa13.64□□□□□ -0.23
KDM3B-201ENST00000314358 ACANP16112 2415 aa13.64□□□□□ -0.23
KDM3B-201ENST00000314358 CASC10Q5T4H9 136 aa13.64□□□□□ -0.23
KDM3B-201ENST00000314358 H7BZZ5 65 aa13.62□□□□□ -0.23
KDM3B-201ENST00000314358 KTN1-AS1Q86SY8 53 aa13.61□□□□□ -0.23
KDM3B-201ENST00000314358 RBM12B-AS1Q9P1G2 102 aa13.6□□□□□ -0.23
KDM3B-201ENST00000314358 A0A087WTM6 91 aa13.59□□□□□ -0.23
KDM3B-201ENST00000314358 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
KDM3B-201ENST00000314358 FAM104AQ969W3 186 aa13.59□□□□□ -0.23
KDM3B-201ENST00000314358 PSORS1C2Q9UIG4 136 aa13.57□□□□□ -0.24
KDM3B-201ENST00000314358 LCA10Q71F78 164 aa13.56□□□□□ -0.24
KDM3B-201ENST00000314358 CD164Q04900 197 aa13.55□□□□□ -0.24
KDM3B-201ENST00000314358 IGLV7-43P04211 117 aa13.53□□□□□ -0.24
KDM3B-201ENST00000314358 A0A096LNT2 108 aa13.51□□□□□ -0.25
KDM3B-201ENST00000314358 PRR34Q9NV39 138 aa13.5□□□□□ -0.25
KDM3B-201ENST00000314358 A0A1W2PNM2 257 aa13.48□□□□□ -0.25
KDM3B-201ENST00000314358 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
KDM3B-201ENST00000314358 LUZP6Q538Z0 58 aa13.47□□□□□ -0.25
KDM3B-201ENST00000314358 ANKRD17O75179 2603 aaKnown RBP13.47□□□□□ -0.25
KDM3B-201ENST00000314358 PRR26Q8N8Z3 221 aa13.46□□□□□ -0.25
KDM3B-201ENST00000314358 GIG44P09565 113 aaPredicted RBP13.46□□□□□ -0.25
KDM3B-201ENST00000314358 SPRR4Q96PI1 79 aa13.45□□□□□ -0.26
KDM3B-201ENST00000314358 MTORP42345 2549 aa13.45□□□□□ -0.26
KDM3B-201ENST00000314358 CHD8Q9HCK8 2581 aa13.44□□□□□ -0.26
KDM3B-201ENST00000314358 C9orf163Q8N9P6 203 aa13.44□□□□□ -0.26
KDM3B-201ENST00000314358 C19orf73Q9NVV2 129 aa13.42□□□□□ -0.26
KDM3B-201ENST00000314358 WIPF1O43516 503 aa13.41□□□□□ -0.26
KDM3B-201ENST00000314358 SPTBN4Q9H254 2564 aa13.41□□□□□ -0.26
KDM3B-201ENST00000314358 POLQO75417 2590 aa13.4□□□□□ -0.26
KDM3B-201ENST00000314358 CAMK2N1Q7Z7J9 78 aa13.37□□□□□ -0.27
KDM3B-201ENST00000314358 TLX1NBP0CAT3 122 aa13.35□□□□□ -0.27
KDM3B-201ENST00000314358 PLA2G2DQ9UNK4 145 aa13.33□□□□□ -0.27
KDM3B-201ENST00000314358 M0R2T5 61 aa13.33□□□□□ -0.28
KDM3B-201ENST00000314358 LINC00612Q8N6U2 182 aa13.32□□□□□ -0.28
KDM3B-201ENST00000314358 Q6ZSA8 131 aa13.31□□□□□ -0.28
KDM3B-201ENST00000314358 CR1P17927 2039 aa13.3□□□□□ -0.28
KDM3B-201ENST00000314358 Q1T7F1 81 aa13.29□□□□□ -0.28
KDM3B-201ENST00000314358 KRTAP1-3Q8IUG1 177 aa13.28□□□□□ -0.28
KDM3B-201ENST00000314358 SPANXA2-OT1Q8N9U9 137 aa13.27□□□□□ -0.29
KDM3B-201ENST00000314358 A0A1B0GU33 70 aa13.22□□□□□ -0.29
KDM3B-201ENST00000314358 TNP2Q05952 138 aa13.21□□□□□ -0.29
KDM3B-201ENST00000314358 PRAC1Q96KF2 57 aa13.21□□□□□ -0.29
KDM3B-201ENST00000314358 HRES1P13985 223 aa13.19□□□□□ -0.3
KDM3B-201ENST00000314358 KRTAP1-1Q07627 177 aa13.19□□□□□ -0.3
KDM3B-201ENST00000314358 LINC00483Q53H64 154 aa13.18□□□□□ -0.3
KDM3B-201ENST00000314358 CNBPP62633 177 aaKnown RBP13.18□□□□□ -0.3
KDM3B-201ENST00000314358 FAM229BQ4G0N7 80 aa13.18□□□□□ -0.3
KDM3B-201ENST00000314358 IGLV7-46A0A075B6I9 117 aa13.17□□□□□ -0.3
KDM3B-201ENST00000314358 OCR1Q9BZK8 76 aa13.16□□□□□ -0.3
KDM3B-201ENST00000314358 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.15□□□□□ -0.3
KDM3B-201ENST00000314358 BPTFQ12830 3046 aa13.13□□□□□ -0.31
KDM3B-201ENST00000314358 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
KDM3B-201ENST00000314358 USP24Q9UPU5 2620 aa13.09□□□□□ -0.31
KDM3B-201ENST00000314358 Q8N9P0 234 aaPredicted RBP13.08□□□□□ -0.32
KDM3B-201ENST00000314358 UTRNP46939 3433 aa13.06□□□□□ -0.32
KDM3B-201ENST00000314358 S4R3F8 94 aa13.03□□□□□ -0.32
KDM3B-201ENST00000314358 H3BS24 57 aa13.02□□□□□ -0.32
KDM3B-201ENST00000314358 CSAG1Q6PB30 78 aa13□□□□□ -0.33
KDM3B-201ENST00000314358 Q75L30 129 aa12.98□□□□□ -0.33
KDM3B-201ENST00000314358 CYSTM1Q9H1C7 97 aa12.94□□□□□ -0.34
KDM3B-201ENST00000314358 EPG5Q9HCE0 2579 aa12.94□□□□□ -0.34
KDM3B-201ENST00000314358 ZCCHC13Q8WW36 166 aaKnown RBP12.92□□□□□ -0.34
KDM3B-201ENST00000314358 MMP24-AS1A0A0U1RRL7 71 aa12.91□□□□□ -0.34
KDM3B-201ENST00000314358 SPINK7P58062 85 aa12.9□□□□□ -0.34
KDM3B-201ENST00000314358 DNAH12Q6ZR08 3092 aa12.89□□□□□ -0.35
KDM3B-201ENST00000314358 DMAC1Q96GE9 116 aa12.87□□□□□ -0.35
KDM3B-201ENST00000314358 Q8NDZ9 215 aa12.86□□□□□ -0.35
KDM3B-201ENST00000314358 Q5XG85 94 aa12.86□□□□□ -0.35
KDM3B-201ENST00000314358 R4GN34 69 aa12.85□□□□□ -0.35
KDM3B-201ENST00000314358 Q5W150 140 aa12.84□□□□□ -0.35
KDM3B-201ENST00000314358 MGAM2Q2M2H8 2515 aa12.84□□□□□ -0.35
KDM3B-201ENST00000314358 LINC01558Q9Y6Z2 57 aa12.84□□□□□ -0.35
KDM3B-201ENST00000314358 FP248Q71RG6 208 aaPredicted RBP12.8□□□□□ -0.36
KDM3B-201ENST00000314358 Q5VV11 94 aa12.8□□□□□ -0.36
KDM3B-201ENST00000314358 A0A0A0MQY5 61 aa12.79□□□□□ -0.36
KDM3B-201ENST00000314358 HECTD1Q9ULT8 2610 aa12.79□□□□□ -0.36
KDM3B-201ENST00000314358 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
KDM3B-201ENST00000314358 CEP350Q5VT06 3117 aa12.72□□□□□ -0.37
KDM3B-201ENST00000314358 PLAC8Q9NZF1 115 aa12.67□□□□□ -0.38
KDM3B-201ENST00000314358 M0QZ58 72 aa12.65□□□□□ -0.38
KDM3B-201ENST00000314358 C5orf42Q9H799 3197 aa12.63□□□□□ -0.39
KDM3B-201ENST00000314358 SPATA8Q6RVD6 105 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms