RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 LINC00528Q8N1L1 170 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 UNQ6190/PRO20217Q6UXQ8 127 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 RANBP2P49792 3224 aaKnown RBP2.75□□□□□ -1.97
USH2A-201ENST00000307340 LINC01554Q52M75 96 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 HELZ2Q9BYK8 2649 aaKnown RBP2.75□□□□□ -1.97
USH2A-201ENST00000307340 C22orf24Q9Y442 160 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 IGLV7-43P04211 117 aa2.75□□□□□ -1.97
USH2A-201ENST00000307340 CSNK1G2-AS1Q8NCQ2 148 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 SOSTDC1Q6X4U4 206 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 Q8NAQ8 132 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 PLA2G1BP04054 148 aaKnown RBP2.74□□□□□ -1.97
USH2A-201ENST00000307340 RBM12B-AS1Q9P1G2 102 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 WDFY4Q6ZS81 3184 aa2.74□□□□□ -1.97
USH2A-201ENST00000307340 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
USH2A-201ENST00000307340 LRBAP50851 2863 aa2.73□□□□□ -1.97
USH2A-201ENST00000307340 A0A087WSZ3 146 aa2.73□□□□□ -1.97
USH2A-201ENST00000307340 IGKV2-24A0A0C4DH68 120 aa2.73□□□□□ -1.97
USH2A-201ENST00000307340 FAM229BQ4G0N7 80 aa2.73□□□□□ -1.97
USH2A-201ENST00000307340 MRPL34Q9BQ48 92 aaKnown RBP2.73□□□□□ -1.97
USH2A-201ENST00000307340 C15orf56Q8N910 161 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 MAPK1IP1LQ8NDC0 245 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 TEP1Q99973 2627 aaKnown RBP2.72□□□□□ -1.97
USH2A-201ENST00000307340 C9orf163Q8N9P6 203 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 MAST4O15021 2626 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 K7EQZ3 153 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 LINC00476Q8WZB0 136 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 USP34Q70CQ2 3546 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 INAFM1C9JVW0 142 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 ATRQ13535 2644 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 LAMA3Q16787 3333 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 VCANP13611 3396 aa2.72□□□□□ -1.97
USH2A-201ENST00000307340 WFDC13Q8IUB5 93 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 CDC42SE1Q9NRR8 79 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 CRIPTQ9P021 101 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 IGLV1-50A0A075B6I6 118 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 H7BZZ5 65 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 ZNF861PO60384 105 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 RPS29P62273 56 aaKnown RBP2.71□□□□□ -1.98
USH2A-201ENST00000307340 USP24Q9UPU5 2620 aa2.71□□□□□ -1.98
USH2A-201ENST00000307340 C9orf116Q5BN46 136 aaPredicted RBP2.71□□□□□ -1.98
USH2A-201ENST00000307340 NBEAQ8NFP9 2946 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 SMCPP49901 116 aaPredicted RBP2.7□□□□□ -1.98
USH2A-201ENST00000307340 NSD1Q96L73 2696 aaPredicted RBP2.7□□□□□ -1.98
USH2A-201ENST00000307340 NBDYA0A0U1RRE5 68 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 SLPIP03973 132 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 COX6B2Q6YFQ2 88 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 Q6ZRU5 148 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 DMAC1Q96GE9 116 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 X6R8D5 127 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 IGLV8-61A0A075B6I0 122 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 CIRBP-AS1Q8TBR5 109 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 IGHV6-1A0A0B4J1U7 121 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 LY6G6CO95867 125 aa2.7□□□□□ -1.98
USH2A-201ENST00000307340 A0A1B0GVX0 72 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 TM2D3Q9BRN9 247 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 KIAA0087Q14695 138 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 IGLV9-49A0A0B4J1Y8 123 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 C4orf26Q17RF5 130 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 APCP25054 2843 aa2.69□□□□□ -1.98
USH2A-201ENST00000307340 SMIM29Q86T20 159 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 DEFB104AQ8WTQ1 72 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 C19orf73Q9NVV2 129 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 EPM2AB3EWF7 344 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 Q75L30 129 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 ZZEF1O43149 2961 aa2.68□□□□□ -1.98
USH2A-201ENST00000307340 UTP20O75691 2785 aaKnown RBP2.68□□□□□ -1.98
USH2A-201ENST00000307340 WWC2-AS2Q96NR7 200 aa2.67□□□□□ -1.98
USH2A-201ENST00000307340 PSORS1C2Q9UIG4 136 aa2.67□□□□□ -1.98
USH2A-201ENST00000307340 CELSR3Q9NYQ7 3312 aa2.67□□□□□ -1.98
USH2A-201ENST00000307340 LINC00588Q9Y4M8 146 aa2.67□□□□□ -1.98
USH2A-201ENST00000307340 FREM2Q5SZK8 3169 aa2.66□□□□□ -1.98
USH2A-201ENST00000307340 OCR1Q9BZK8 76 aa2.66□□□□□ -1.98
USH2A-201ENST00000307340 UNC79Q9P2D8 2635 aa2.66□□□□□ -1.98
USH2A-201ENST00000307340 MGAM2Q2M2H8 2515 aa2.66□□□□□ -1.98
USH2A-201ENST00000307340 TYMSOSQ8TAI1 123 aa2.66□□□□□ -1.98
USH2A-201ENST00000307340 DMXL2Q8TDJ6 3036 aa2.65□□□□□ -1.98
USH2A-201ENST00000307340 SPRR1BP22528 89 aa2.65□□□□□ -1.98
USH2A-201ENST00000307340 Q5XG85 94 aa2.65□□□□□ -1.98
USH2A-201ENST00000307340 CHTF8P0CG12 524 aa2.65□□□□□ -1.98
USH2A-201ENST00000307340 ITPR1Q14643 2758 aa2.65□□□□□ -1.98
USH2A-201ENST00000307340 GAS8-AS1O95177 125 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 SPRR1AP35321 89 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 DEFB4AO15263 64 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 Q9UF83 564 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 COA5Q86WW8 74 aa2.65□□□□□ -1.99
USH2A-201ENST00000307340 ASH1LQ9NR48 2969 aaKnown RBP2.65□□□□□ -1.99
USH2A-201ENST00000307340 CDH23Q9H251 3354 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 C8orf17Q9NRJ1 99 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 Q8N377 158 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 SPINK6Q6UWN8 80 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 Q6ZSN1 163 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 ST20-AS1Q8NBB2 130 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 DNAH14Q0VDD8 3507 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 A0A096LNT2 108 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 DEFB1P60022 68 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 IGFL1Q6UW32 110 aa2.64□□□□□ -1.99
USH2A-201ENST00000307340 DMXL1Q9Y485 3027 aa2.63□□□□□ -1.99
USH2A-201ENST00000307340 ATMQ13315 3056 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms