RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 ZFYVE26Q68DK2 2539 aa3.49□□□□□ -1.85
USP8-201ENST00000307179 PSPHP1O15172 72 aa3.49□□□□□ -1.85
USP8-201ENST00000307179 Q8N9P0 234 aaPredicted RBP3.49□□□□□ -1.85
USP8-201ENST00000307179 IGLV1-50A0A075B6I6 118 aa3.49□□□□□ -1.85
USP8-201ENST00000307179 A8MUN3 132 aa3.48□□□□□ -1.85
USP8-201ENST00000307179 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
USP8-201ENST00000307179 IGKV2D-24A0A075B6R9 120 aa3.48□□□□□ -1.85
USP8-201ENST00000307179 SETD2Q9BYW2 2564 aaPredicted RBP3.48□□□□□ -1.85
USP8-201ENST00000307179 KRTAP29-1A8MX34 341 aaPredicted RBP3.48□□□□□ -1.85
USP8-201ENST00000307179 LINC01556Q5JQF7 62 aa3.48□□□□□ -1.85
USP8-201ENST00000307179 MAPK1IP1LQ8NDC0 245 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 H0Y9P7 68 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 CHKB-CPT1BH3BT56 60 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 C9orf163Q8N9P6 203 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 WNK1Q9H4A3 2382 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 ST20-AS1Q8NBB2 130 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 DEFB105AQ8NG35 78 aa3.47□□□□□ -1.85
USP8-201ENST00000307179 A0A087X002 238 aa3.46□□□□□ -1.85
USP8-201ENST00000307179 KRTAP1-3Q8IUG1 177 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 TP53AIP1Q9HCN2 124 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 IGLV7-46A0A075B6I9 117 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 C7orf65Q6ZTY9 151 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 POLQO75417 2590 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 A6NN06 94 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 DEFB135Q30KP9 77 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 LINC00476Q8WZB0 136 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 LINC01558Q9Y6Z2 57 aa3.46□□□□□ -1.86
USP8-201ENST00000307179 C16orf90A8MZG2 172 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 CASC2Q6XLA1 102 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 CSPG4Q6UVK1 2322 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 ZANQ9Y493 2812 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 A8MWP4 228 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 PLAC8Q9NZF1 115 aa3.45□□□□□ -1.86
USP8-201ENST00000307179 SERTAD4-AS1Q5TG53 156 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 REG3GQ6UW15 175 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 CACNA1AO00555 2505 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 RBM12B-AS1Q9P1G2 102 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 CREBBPQ92793 2442 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 FLNCQ14315 2725 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 LRCOL1A6NCL2 159 aa3.44□□□□□ -1.86
USP8-201ENST00000307179 TLN2Q9Y4G6 2542 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 SPRR1BP22528 89 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 COA5Q86WW8 74 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 A6NED7 52 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 DNAH10OSP0CZ25 163 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 WFDC10BQ8IUB3 73 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 ITPR1Q14643 2758 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 NOTCH3Q9UM47 2321 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 H0Y9J4 135 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 MOBPQ13875 183 aa3.43□□□□□ -1.86
USP8-201ENST00000307179 RETNQ9HD89 108 aa3.42□□□□□ -1.86
USP8-201ENST00000307179 DOPEY1Q5JWR5 2465 aa3.42□□□□□ -1.86
USP8-201ENST00000307179 NIPBLQ6KC79 2804 aaeCLIP3.42□□□□□ -1.86
USP8-201ENST00000307179 HTN3P15516 51 aa3.42□□□□□ -1.86
USP8-201ENST00000307179 LCA10Q71F78 164 aa3.42□□□□□ -1.86
USP8-201ENST00000307179 WFDC13Q8IUB5 93 aa3.42□□□□□ -1.86
USP8-201ENST00000307179 CNBPP62633 177 aaKnown RBP3.41□□□□□ -1.86
USP8-201ENST00000307179 ANKRD17O75179 2603 aaKnown RBP3.41□□□□□ -1.86
USP8-201ENST00000307179 RPL37AP61513 92 aaKnown RBP3.41□□□□□ -1.86
USP8-201ENST00000307179 USP9YO00507 2555 aaPredicted RBP3.41□□□□□ -1.86
USP8-201ENST00000307179 DEFB131BA0A096LNP1 70 aa3.4□□□□□ -1.86
USP8-201ENST00000307179 PRB1P04280 392 aa3.4□□□□□ -1.86
USP8-201ENST00000307179 PRR4Q16378 134 aa3.4□□□□□ -1.86
USP8-201ENST00000307179 Q6ZR54 194 aa3.4□□□□□ -1.86
USP8-201ENST00000307179 A0A087WSZ3 146 aa3.4□□□□□ -1.87
USP8-201ENST00000307179 KRTAP1-1Q07627 177 aa3.4□□□□□ -1.87
USP8-201ENST00000307179 LINC00472Q9H8W2 130 aa3.4□□□□□ -1.87
USP8-201ENST00000307179 DEFB4AO15263 64 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 MYO18BQ8IUG5 2567 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 CFAP46Q8IYW2 2715 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 SONP18583 2426 aaKnown RBP3.39□□□□□ -1.87
USP8-201ENST00000307179 SPTSSBQ8NFR3 76 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 FBN2P35556 2912 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 NF1P21359 2839 aa3.39□□□□□ -1.87
USP8-201ENST00000307179 PTPN13Q12923 2485 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 FAM208BQ5VWN6 2430 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 ABCA12Q86UK0 2595 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 AKAP9Q99996 3911 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 C2CD3Q4AC94 2353 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 KRTAP10-9P60411 292 aa3.38□□□□□ -1.87
USP8-201ENST00000307179 KRTAP10-3P60369 221 aa3.37□□□□□ -1.87
USP8-201ENST00000307179 SETXQ7Z333 2677 aaKnown RBP3.37□□□□□ -1.87
USP8-201ENST00000307179 KRTAP7-1Q8IUC3 87 aa3.36□□□□□ -1.87
USP8-201ENST00000307179 CCDC168Q8NDH2 2452 aa3.36□□□□□ -1.87
USP8-201ENST00000307179 LRRK2Q5S007 2527 aa3.36□□□□□ -1.87
USP8-201ENST00000307179 C14orf177Q52M58 125 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 USP9XQ93008 2570 aaPredicted RBP3.35□□□□□ -1.87
USP8-201ENST00000307179 PIEZO1Q92508 2521 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 FAM168BA1KXE4 195 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 EPG5Q9HCE0 2579 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 MYO9AB2RTY4 2548 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 NOTCH2Q04721 2471 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 CHD6Q8TD26 2715 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 ACACBO00763 2458 aa3.35□□□□□ -1.87
USP8-201ENST00000307179 IGKV2-24A0A0C4DH68 120 aa3.33□□□□□ -1.88
USP8-201ENST00000307179 MDFIQ99750 246 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms