RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 LINC00846Q9NV44 126 aa7.05□□□□□ -1.28
SYNPO2-201ENST00000307142 COX7CP15954 63 aa7.05□□□□□ -1.28
SYNPO2-201ENST00000307142 PRR34Q9NV39 138 aa7.05□□□□□ -1.28
SYNPO2-201ENST00000307142 ZNF575Q86XF7 245 aa7.05□□□□□ -1.28
SYNPO2-201ENST00000307142 A0A0C4DFX4 3053 aa7.04□□□□□ -1.28
SYNPO2-201ENST00000307142 SMIM29Q86T20 159 aa7.04□□□□□ -1.28
SYNPO2-201ENST00000307142 CXCL6P80162 114 aa7.04□□□□□ -1.28
SYNPO2-201ENST00000307142 LINC00612Q8N6U2 182 aa7.04□□□□□ -1.28
SYNPO2-201ENST00000307142 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
SYNPO2-201ENST00000307142 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
SYNPO2-201ENST00000307142 TNP2Q05952 138 aa7.03□□□□□ -1.28
SYNPO2-201ENST00000307142 SZT2Q5T011 3432 aa7.03□□□□□ -1.28
SYNPO2-201ENST00000307142 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
SYNPO2-201ENST00000307142 TP53AIP1Q9HCN2 124 aa7.02□□□□□ -1.28
SYNPO2-201ENST00000307142 TRBV7-7A0A0K0K1E9 115 aa7.02□□□□□ -1.29
SYNPO2-201ENST00000307142 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
SYNPO2-201ENST00000307142 WDFY4Q6ZS81 3184 aa7.02□□□□□ -1.29
SYNPO2-201ENST00000307142 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
SYNPO2-201ENST00000307142 C9orf129Q5T035 196 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-201ENST00000307142 ANAPC11Q9NYG5 84 aa7.01□□□□□ -1.29
SYNPO2-201ENST00000307142 DNAH14Q0VDD8 3507 aa7.01□□□□□ -1.29
SYNPO2-201ENST00000307142 CELSR3Q9NYQ7 3312 aa7.01□□□□□ -1.29
SYNPO2-201ENST00000307142 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
SYNPO2-201ENST00000307142 TRIOO75962 3097 aa7□□□□□ -1.29
SYNPO2-201ENST00000307142 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
SYNPO2-201ENST00000307142 KCNQ1DNQ9H478 68 aa6.99□□□□□ -1.29
SYNPO2-201ENST00000307142 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
SYNPO2-201ENST00000307142 ATRQ13535 2644 aa6.97□□□□□ -1.29
SYNPO2-201ENST00000307142 Q6ZQT0 140 aa6.97□□□□□ -1.29
SYNPO2-201ENST00000307142 OBSCN-AS1Q96MR7 158 aa6.97□□□□□ -1.29
SYNPO2-201ENST00000307142 MAST4O15021 2626 aa6.97□□□□□ -1.29
SYNPO2-201ENST00000307142 A0A1B0GW54 56 aa6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 CENPEQ02224 2701 aa6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 DSCR10P59022 87 aa6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 BAHCC1Q9P281 2608 aa6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 CNBPP62633 177 aaKnown RBP6.96□□□□□ -1.3
SYNPO2-201ENST00000307142 AKAP13Q12802 2813 aa6.95□□□□□ -1.3
SYNPO2-201ENST00000307142 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
SYNPO2-201ENST00000307142 ZNF292O60281 2723 aa6.95□□□□□ -1.3
SYNPO2-201ENST00000307142 ACYP2P14621 99 aa6.95□□□□□ -1.3
SYNPO2-201ENST00000307142 SSBP3-AS1Q7Z2R9 100 aa6.95□□□□□ -1.3
SYNPO2-201ENST00000307142 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
SYNPO2-201ENST00000307142 LOC110117498A0A087WWA1 95 aa6.93□□□□□ -1.3
SYNPO2-201ENST00000307142 TMEM254Q8TBM7 123 aa6.93□□□□□ -1.3
SYNPO2-201ENST00000307142 SPTBN5Q9NRC6 3674 aaKnown RBP6.93□□□□□ -1.3
SYNPO2-201ENST00000307142 COL6A3P12111 3177 aa6.93□□□□□ -1.3
SYNPO2-201ENST00000307142 PLA2G2DQ9UNK4 145 aa6.93□□□□□ -1.3
SYNPO2-201ENST00000307142 A0A0U1RQV1 116 aa6.92□□□□□ -1.3
SYNPO2-201ENST00000307142 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
SYNPO2-201ENST00000307142 A8MWP4 228 aa6.92□□□□□ -1.3
SYNPO2-201ENST00000307142 IGFL1Q6UW32 110 aa6.92□□□□□ -1.3
SYNPO2-201ENST00000307142 LITAFQ99732 161 aa6.9□□□□□ -1.3
SYNPO2-201ENST00000307142 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.31
SYNPO2-201ENST00000307142 WIPF1O43516 503 aa6.89□□□□□ -1.31
SYNPO2-201ENST00000307142 MRPL34Q9BQ48 92 aaKnown RBP6.89□□□□□ -1.31
SYNPO2-201ENST00000307142 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
SYNPO2-201ENST00000307142 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
SYNPO2-201ENST00000307142 A0A1B0GU69 56 aa6.87□□□□□ -1.31
SYNPO2-201ENST00000307142 TEX15Q9BXT5 2789 aa6.87□□□□□ -1.31
SYNPO2-201ENST00000307142 PSPHP1O15172 72 aa6.87□□□□□ -1.31
SYNPO2-201ENST00000307142 DSPP15924 2871 aaKnown RBP6.87□□□□□ -1.31
SYNPO2-201ENST00000307142 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
SYNPO2-201ENST00000307142 Q8N377 158 aa6.86□□□□□ -1.31
SYNPO2-201ENST00000307142 LAMA1P25391 3075 aa6.86□□□□□ -1.31
SYNPO2-201ENST00000307142 K7EQZ3 153 aa6.86□□□□□ -1.31
SYNPO2-201ENST00000307142 TEP1Q99973 2627 aaKnown RBP6.86□□□□□ -1.31
SYNPO2-201ENST00000307142 TNRC18O15417 2968 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-201ENST00000307142 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
SYNPO2-201ENST00000307142 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
SYNPO2-201ENST00000307142 SMIM26A0A096LP01 95 aa6.84□□□□□ -1.31
SYNPO2-201ENST00000307142 IGLV8-61A0A075B6I0 122 aa6.83□□□□□ -1.32
SYNPO2-201ENST00000307142 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
SYNPO2-201ENST00000307142 PRR26Q8N8Z3 221 aa6.82□□□□□ -1.32
SYNPO2-201ENST00000307142 VCANP13611 3396 aa6.82□□□□□ -1.32
SYNPO2-201ENST00000307142 LCE6AA0A183 80 aa6.82□□□□□ -1.32
SYNPO2-201ENST00000307142 ERC2-IT1O76042 136 aa6.82□□□□□ -1.32
SYNPO2-201ENST00000307142 LOC101927531A0A1B0GV80 90 aa6.81□□□□□ -1.32
SYNPO2-201ENST00000307142 C8orf17Q9NRJ1 99 aa6.81□□□□□ -1.32
SYNPO2-201ENST00000307142 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
SYNPO2-201ENST00000307142 IGLV7-46A0A075B6I9 117 aa6.81□□□□□ -1.32
SYNPO2-201ENST00000307142 EIF4EBP3O60516 100 aaPredicted RBP6.81□□□□□ -1.32
SYNPO2-201ENST00000307142 H3BPC8 53 aa6.8□□□□□ -1.32
SYNPO2-201ENST00000307142 M0R2T5 61 aa6.79□□□□□ -1.32
SYNPO2-201ENST00000307142 USP34Q70CQ2 3546 aa6.79□□□□□ -1.32
SYNPO2-201ENST00000307142 Q6ZSA8 131 aa6.79□□□□□ -1.32
SYNPO2-201ENST00000307142 IGSF10Q6WRI0 2623 aa6.78□□□□□ -1.32
SYNPO2-201ENST00000307142 Q5VSD8 79 aa6.78□□□□□ -1.32
SYNPO2-201ENST00000307142 PRR15Q8IV56 129 aa6.77□□□□□ -1.33
SYNPO2-201ENST00000307142 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
SYNPO2-201ENST00000307142 CHD6Q8TD26 2715 aa6.73□□□□□ -1.33
SYNPO2-201ENST00000307142 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
SYNPO2-201ENST00000307142 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
SYNPO2-201ENST00000307142 PLAC8Q9NZF1 115 aa6.72□□□□□ -1.33
SYNPO2-201ENST00000307142 FRYLO94915 3013 aa6.72□□□□□ -1.33
SYNPO2-201ENST00000307142 SETXQ7Z333 2677 aaKnown RBP6.72□□□□□ -1.33
SYNPO2-201ENST00000307142 ITPR2Q14571 2701 aa6.71□□□□□ -1.34
SYNPO2-201ENST00000307142 FRYQ5TBA9 3013 aa6.69□□□□□ -1.34
SYNPO2-201ENST00000307142 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
SYNPO2-201ENST00000307142 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms