RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TRANK1O15050 2925 aa10.71□□□□□ -0.7
USP42-201ENST00000306177 SERTAD4-AS1Q5TG53 156 aa10.7□□□□□ -0.7
USP42-201ENST00000306177 FLNAP21333 2647 aaKnown RBP10.69□□□□□ -0.7
USP42-201ENST00000306177 PRO0628Q9UI54 55 aa10.68□□□□□ -0.7
USP42-201ENST00000306177 CHTF8P0CG12 524 aa10.67□□□□□ -0.7
USP42-201ENST00000306177 C19orf73Q9NVV2 129 aa10.67□□□□□ -0.7
USP42-201ENST00000306177 GIG44P09565 113 aaPredicted RBP10.66□□□□□ -0.7
USP42-201ENST00000306177 KRTAP10-3P60369 221 aa10.65□□□□□ -0.7
USP42-201ENST00000306177 KRTAP1-3Q8IUG1 177 aa10.65□□□□□ -0.71
USP42-201ENST00000306177 MUC3AQ02505 3323 aa10.64□□□□□ -0.71
USP42-201ENST00000306177 KRTAP10-11P60412 298 aa10.64□□□□□ -0.71
USP42-201ENST00000306177 FAM168BA1KXE4 195 aa10.64□□□□□ -0.71
USP42-201ENST00000306177 C7orf65Q6ZTY9 151 aa10.63□□□□□ -0.71
USP42-201ENST00000306177 H3BPC8 53 aa10.63□□□□□ -0.71
USP42-201ENST00000306177 PRR34Q9NV39 138 aa10.63□□□□□ -0.71
USP42-201ENST00000306177 TRBV7-4A0A0J9YYF1 115 aa10.63□□□□□ -0.71
USP42-201ENST00000306177 RPS28P62857 69 aaKnown RBP10.63□□□□□ -0.71
USP42-201ENST00000306177 WWC2-AS2Q96NR7 200 aa10.62□□□□□ -0.71
USP42-201ENST00000306177 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
USP42-201ENST00000306177 ITPR3Q14573 2671 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 CENPEQ02224 2701 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 IGLV1-50A0A075B6I6 118 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 KCNQ1DNQ9H478 68 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 K7EIL1 84 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 LINC00612Q8N6U2 182 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 TYMSOSQ8TAI1 123 aa10.61□□□□□ -0.71
USP42-201ENST00000306177 FAM229AH3BQW9 127 aa10.6□□□□□ -0.71
USP42-201ENST00000306177 ACYP2P14621 99 aa10.6□□□□□ -0.71
USP42-201ENST00000306177 FRYQ5TBA9 3013 aa10.6□□□□□ -0.71
USP42-201ENST00000306177 LINC00313P59037 77 aa10.59□□□□□ -0.71
USP42-201ENST00000306177 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
USP42-201ENST00000306177 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
USP42-201ENST00000306177 EIF4EBP3O60516 100 aaPredicted RBP10.57□□□□□ -0.72
USP42-201ENST00000306177 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
USP42-201ENST00000306177 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
USP42-201ENST00000306177 KRTAP1-1Q07627 177 aa10.57□□□□□ -0.72
USP42-201ENST00000306177 C15orf56Q8N910 161 aa10.57□□□□□ -0.72
USP42-201ENST00000306177 C4orf26Q17RF5 130 aa10.56□□□□□ -0.72
USP42-201ENST00000306177 ATRQ13535 2644 aa10.56□□□□□ -0.72
USP42-201ENST00000306177 CFAP46Q8IYW2 2715 aa10.55□□□□□ -0.72
USP42-201ENST00000306177 SPAG11AQ6PDA7 123 aa10.55□□□□□ -0.72
USP42-201ENST00000306177 A0A1B0GU69 56 aa10.54□□□□□ -0.72
USP42-201ENST00000306177 MAST4O15021 2626 aa10.54□□□□□ -0.72
USP42-201ENST00000306177 ASPMQ8IZT6 3477 aa10.54□□□□□ -0.72
USP42-201ENST00000306177 A8MWP4 228 aa10.53□□□□□ -0.72
USP42-201ENST00000306177 DMDP11532 3685 aa10.5□□□□□ -0.73
USP42-201ENST00000306177 K7EQZ3 153 aa10.5□□□□□ -0.73
USP42-201ENST00000306177 BOD1L1Q8NFC6 3051 aa10.49□□□□□ -0.73
USP42-201ENST00000306177 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
USP42-201ENST00000306177 C9orf129Q5T035 196 aaKnown RBP10.49□□□□□ -0.73
USP42-201ENST00000306177 NBEAQ8NFP9 2946 aa10.49□□□□□ -0.73
USP42-201ENST00000306177 ZNF292O60281 2723 aa10.49□□□□□ -0.73
USP42-201ENST00000306177 LOC400499M0QZD8 3231 aa10.48□□□□□ -0.73
USP42-201ENST00000306177 TLX1NBP0CAT3 122 aa10.47□□□□□ -0.73
USP42-201ENST00000306177 LOC101927531A0A1B0GV80 90 aa10.47□□□□□ -0.73
USP42-201ENST00000306177 IGFL1Q6UW32 110 aa10.47□□□□□ -0.73
USP42-201ENST00000306177 PLA2G1BP04054 148 aaKnown RBP10.46□□□□□ -0.73
USP42-201ENST00000306177 Q96NJ1 140 aa10.46□□□□□ -0.73
USP42-201ENST00000306177 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.74
USP42-201ENST00000306177 MRPL34Q9BQ48 92 aaKnown RBP10.45□□□□□ -0.74
USP42-201ENST00000306177 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
USP42-201ENST00000306177 MGAQ8IWI9 3026 aa10.43□□□□□ -0.74
USP42-201ENST00000306177 Q8N377 158 aa10.43□□□□□ -0.74
USP42-201ENST00000306177 DSPP15924 2871 aaKnown RBP10.43□□□□□ -0.74
USP42-201ENST00000306177 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
USP42-201ENST00000306177 ATP11AUNQ6ZP68 121 aa10.42□□□□□ -0.74
USP42-201ENST00000306177 A0A087WTM6 91 aa10.42□□□□□ -0.74
USP42-201ENST00000306177 ZNF861PO60384 105 aa10.41□□□□□ -0.74
USP42-201ENST00000306177 SPINT4Q6UDR6 99 aa10.39□□□□□ -0.75
USP42-201ENST00000306177 SSBP3-AS1Q7Z2R9 100 aa10.38□□□□□ -0.75
USP42-201ENST00000306177 PRR15Q8IV56 129 aa10.38□□□□□ -0.75
USP42-201ENST00000306177 C8orf17Q9NRJ1 99 aa10.36□□□□□ -0.75
USP42-201ENST00000306177 ZNF575Q86XF7 245 aa10.35□□□□□ -0.75
USP42-201ENST00000306177 APLNQ9ULZ1 77 aa10.35□□□□□ -0.75
USP42-201ENST00000306177 CNBPP62633 177 aaKnown RBP10.34□□□□□ -0.75
USP42-201ENST00000306177 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
USP42-201ENST00000306177 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
USP42-201ENST00000306177 A0A1W2PNN7 141 aa10.32□□□□□ -0.76
USP42-201ENST00000306177 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
USP42-201ENST00000306177 CFAP47Q6ZTR5 3102 aa10.32□□□□□ -0.76
USP42-201ENST00000306177 DCHS1Q96JQ0 3298 aa10.32□□□□□ -0.76
USP42-201ENST00000306177 DSCR10P59022 87 aa10.32□□□□□ -0.76
USP42-201ENST00000306177 LINC00304Q8N9R0 145 aa10.31□□□□□ -0.76
USP42-201ENST00000306177 A0A0G2JQZ4 141 aa10.3□□□□□ -0.76
USP42-201ENST00000306177 COA5Q86WW8 74 aa10.3□□□□□ -0.76
USP42-201ENST00000306177 ATMQ13315 3056 aa10.29□□□□□ -0.76
USP42-201ENST00000306177 KLKP1Q107X0 134 aa10.29□□□□□ -0.76
USP42-201ENST00000306177 IGLV7-43P04211 117 aa10.28□□□□□ -0.76
USP42-201ENST00000306177 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
USP42-201ENST00000306177 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
USP42-201ENST00000306177 LAMA5O15230 3695 aa10.26□□□□□ -0.77
USP42-201ENST00000306177 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
USP42-201ENST00000306177 SPRR4Q96PI1 79 aa10.25□□□□□ -0.77
USP42-201ENST00000306177 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
USP42-201ENST00000306177 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
USP42-201ENST00000306177 TEP1Q99973 2627 aaKnown RBP10.24□□□□□ -0.77
USP42-201ENST00000306177 J3QL48 77 aa10.24□□□□□ -0.77
USP42-201ENST00000306177 OBSCN-AS1Q96MR7 158 aa10.24□□□□□ -0.77
USP42-201ENST00000306177 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
USP42-201ENST00000306177 AKAP13Q12802 2813 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms