RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 RP1L1Q8IWN7 2480 aaPredicted RBP1.49□□□□□ -2.17
CSN3-201ENST00000304954 ZFHX3Q15911 3703 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 CCL22O00626 93 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 INE1O15225 51 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 RPS27P42677 84 aaKnown RBP1.48□□□□□ -2.17
CSN3-201ENST00000304954 PIGYQ3MUY2 71 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 Q6ZRN7 208 aaPredicted RBP1.48□□□□□ -2.17
CSN3-201ENST00000304954 CCL19Q99731 98 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 NRXN2Q9P2S2 1712 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 CEP192Q8TEP8 1941 aa1.48□□□□□ -2.17
CSN3-201ENST00000304954 ANKRD17O75179 2603 aaKnown RBP1.47□□□□□ -2.17
CSN3-201ENST00000304954 SPTY2D1-AS1A0A0U1RR47 76 aa1.47□□□□□ -2.17
CSN3-201ENST00000304954 LY6G6CO95867 125 aa1.47□□□□□ -2.17
CSN3-201ENST00000304954 SSBP3-AS1Q7Z2R9 100 aa1.47□□□□□ -2.17
CSN3-201ENST00000304954 PLAC4Q8WY50 150 aa1.47□□□□□ -2.17
CSN3-201ENST00000304954 LYNX1G3V0Z9 82 aa1.46□□□□□ -2.18
CSN3-201ENST00000304954 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
CSN3-201ENST00000304954 Q6ZRX8 168 aa1.46□□□□□ -2.18
CSN3-201ENST00000304954 PLXNB2O15031 1838 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 SPINK9Q5DT21 86 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 C10orf55Q5SWW7 151 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 COX6B2Q6YFQ2 88 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 RPL39LQ96EH5 51 aaKnown RBP1.45□□□□□ -2.18
CSN3-201ENST00000304954 CRIPTQ9P021 101 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 RTTNQ86VV8 2226 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 SSC5DA1L4H1 1573 aa1.45□□□□□ -2.18
CSN3-201ENST00000304954 IGLV5-48A0A075B6I7 105 aa1.44□□□□□ -2.18
CSN3-201ENST00000304954 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
CSN3-201ENST00000304954 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.44□□□□□ -2.18
CSN3-201ENST00000304954 SPACA4Q8TDM5 124 aa1.44□□□□□ -2.18
CSN3-201ENST00000304954 KRTAP4-1Q9BYQ7 146 aa1.44□□□□□ -2.18
CSN3-201ENST00000304954 MED13LQ71F56 2210 aa1.43□□□□□ -2.18
CSN3-201ENST00000304954 M0QY20 66 aa1.43□□□□□ -2.18
CSN3-201ENST00000304954 TMEM167AQ8TBQ9 72 aa1.43□□□□□ -2.18
CSN3-201ENST00000304954 KNTC1P50748 2209 aa1.43□□□□□ -2.18
CSN3-201ENST00000304954 PDE4DIPQ5VU43 2346 aa1.43□□□□□ -2.18
CSN3-201ENST00000304954 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
CSN3-201ENST00000304954 A0A096LNT2 108 aa1.42□□□□□ -2.18
CSN3-201ENST00000304954 GVQW2A0A096LPI5 108 aaPredicted RBP1.41□□□□□ -2.18
CSN3-201ENST00000304954 I3L2K1 104 aa1.41□□□□□ -2.18
CSN3-201ENST00000304954 K7EIM0 57 aa1.41□□□□□ -2.18
CSN3-201ENST00000304954 K7EQZ3 153 aa1.41□□□□□ -2.18
CSN3-201ENST00000304954 PRB3Q04118 309 aaPredicted RBP1.41□□□□□ -2.18
CSN3-201ENST00000304954 MINOS1Q5TGZ0 78 aa1.41□□□□□ -2.18
CSN3-201ENST00000304954 MRPL34Q9BQ48 92 aaKnown RBP1.41□□□□□ -2.18
CSN3-201ENST00000304954 CADP27708 2225 aa1.41□□□□□ -2.18
CSN3-201ENST00000304954 HELZ2Q9BYK8 2649 aaKnown RBP1.41□□□□□ -2.18
CSN3-201ENST00000304954 ZFHX2Q9C0A1 2572 aaPredicted RBP1.41□□□□□ -2.18
CSN3-201ENST00000304954 KMT2BQ9UMN6 2715 aaPredicted RBP1.4□□□□□ -2.18
CSN3-201ENST00000304954 DEFB131AP59861 70 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 LEAP2Q969E1 77 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 USMG5Q96IX5 58 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 PRO3102Q9H379 93 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 C6orf48Q9UBA6 75 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 BPTFQ12830 3046 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 CACNA1CQ13936 2221 aa1.4□□□□□ -2.19
CSN3-201ENST00000304954 F5P12259 2224 aa1.39□□□□□ -2.19
CSN3-201ENST00000304954 G3V318 75 aa1.39□□□□□ -2.19
CSN3-201ENST00000304954 COX6A2Q02221 97 aa1.39□□□□□ -2.19
CSN3-201ENST00000304954 WT1-ASQ06250 92 aa1.39□□□□□ -2.19
CSN3-201ENST00000304954 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
CSN3-201ENST00000304954 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
CSN3-201ENST00000304954 AHCTF1Q8WYP5 2266 aa1.37□□□□□ -2.19
CSN3-201ENST00000304954 LYNX1P0DP58 116 aa1.37□□□□□ -2.19
CSN3-201ENST00000304954 UNQ6190/PRO20217Q6UXQ8 127 aa1.37□□□□□ -2.19
CSN3-201ENST00000304954 WFDC10BQ8IUB3 73 aa1.37□□□□□ -2.19
CSN3-201ENST00000304954 URB1O60287 2271 aaKnown RBP1.37□□□□□ -2.19
CSN3-201ENST00000304954 FLG2Q5D862 2391 aaPredicted RBP1.36□□□□□ -2.19
CSN3-201ENST00000304954 COL4A5P29400 1685 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 TECTAO75443 2155 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 RPL39P5Q59GN2 51 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 WFDC13Q8IUB5 93 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 UBE2DNLQ8IWF7 75 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 BRWD1Q9NSI6 2320 aa1.36□□□□□ -2.19
CSN3-201ENST00000304954 DEFB108AA8MXU0 73 aa1.35□□□□□ -2.19
CSN3-201ENST00000304954 ASCC3Q8N3C0 2202 aaKnown RBP1.34□□□□□ -2.19
CSN3-201ENST00000304954 RPL37P61927 97 aaKnown RBP1.34□□□□□ -2.19
CSN3-201ENST00000304954 KLK9Q2XQG4 91 aa1.34□□□□□ -2.19
CSN3-201ENST00000304954 DEFB109BQ30KR1 87 aa1.34□□□□□ -2.19
CSN3-201ENST00000304954 H3BUA1 57 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 DEFB123Q8N688 67 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 TOMM7Q9P0U1 55 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 KAAG1Q9UBP8 84 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 ASXL3Q9C0F0 2248 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 WNK2Q9Y3S1 2297 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 KNL1Q8NG31 2342 aa1.33□□□□□ -2.2
CSN3-201ENST00000304954 TNRC6CQ9HCJ0 1690 aaKnown RBP1.32□□□□□ -2.2
CSN3-201ENST00000304954 ABCA1O95477 2261 aa1.32□□□□□ -2.2
CSN3-201ENST00000304954 PLCE1Q9P212 2302 aa1.32□□□□□ -2.2
CSN3-201ENST00000304954 CNOT1A5YKK6 2376 aaKnown RBP1.32□□□□□ -2.2
CSN3-201ENST00000304954 H0YAA0 97 aa1.32□□□□□ -2.2
CSN3-201ENST00000304954 CACNA1EQ15878 2313 aa1.31□□□□□ -2.2
CSN3-201ENST00000304954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.31□□□□□ -2.2
CSN3-201ENST00000304954 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
CSN3-201ENST00000304954 USF3Q68DE3 2245 aa1.31□□□□□ -2.2
CSN3-201ENST00000304954 PTPRQQ9UMZ3 2332 aa1.31□□□□□ -2.2
CSN3-201ENST00000304954 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
CSN3-201ENST00000304954 MMP24-AS1A0A0U1RRL7 71 aa1.3□□□□□ -2.2
CSN3-201ENST00000304954 A8MTW9 85 aa1.3□□□□□ -2.2
CSN3-201ENST00000304954 H0YGG7 62 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms