RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 CRYGAP11844 174 aa13.97□□□□□ -0.17
LTBP3-201ENST00000301873 LINC00476Q8WZB0 136 aa13.97□□□□□ -0.17
LTBP3-201ENST00000301873 C19orf73Q9NVV2 129 aa13.97□□□□□ -0.17
LTBP3-201ENST00000301873 VPREB1P12018 145 aa13.96□□□□□ -0.17
LTBP3-201ENST00000301873 PMAIP1Q13794 54 aa13.95□□□□□ -0.18
LTBP3-201ENST00000301873 C1orf195Q5TG92 126 aa13.95□□□□□ -0.18
LTBP3-201ENST00000301873 REV3LO60673 3130 aa13.93□□□□□ -0.18
LTBP3-201ENST00000301873 GVQW2A0A096LPI5 108 aaPredicted RBP13.92□□□□□ -0.18
LTBP3-201ENST00000301873 hDV103S1A0JD37 113 aa13.92□□□□□ -0.18
LTBP3-201ENST00000301873 FAM168BA1KXE4 195 aa13.91□□□□□ -0.18
LTBP3-201ENST00000301873 EPM2AB3EWF7 344 aa13.91□□□□□ -0.18
LTBP3-201ENST00000301873 TM2D3Q9BRN9 247 aa13.91□□□□□ -0.18
LTBP3-201ENST00000301873 LOC110117498A0A087WWA1 95 aa13.91□□□□□ -0.18
LTBP3-201ENST00000301873 IGLV6-57P01721 117 aa13.91□□□□□ -0.18
LTBP3-201ENST00000301873 NBEAL2Q6ZNJ1 2754 aa13.9□□□□□ -0.18
LTBP3-201ENST00000301873 NBDYA0A0U1RRE5 68 aa13.89□□□□□ -0.19
LTBP3-201ENST00000301873 SPACA4Q8TDM5 124 aa13.89□□□□□ -0.19
LTBP3-201ENST00000301873 FRYLO94915 3013 aa13.89□□□□□ -0.19
LTBP3-201ENST00000301873 IGKV2D-30A0A075B6S6 120 aa13.89□□□□□ -0.19
LTBP3-201ENST00000301873 IGKV2-30P06310 120 aa13.89□□□□□ -0.19
LTBP3-201ENST00000301873 DNAH10OSP0CZ25 163 aa13.88□□□□□ -0.19
LTBP3-201ENST00000301873 USP34Q70CQ2 3546 aa13.88□□□□□ -0.19
LTBP3-201ENST00000301873 C16orf90A8MZG2 172 aa13.88□□□□□ -0.19
LTBP3-201ENST00000301873 SERTAD4-AS1Q5TG53 156 aa13.87□□□□□ -0.19
LTBP3-201ENST00000301873 MYO15AQ9UKN7 3530 aa13.85□□□□□ -0.19
LTBP3-201ENST00000301873 DMXL2Q8TDJ6 3036 aa13.85□□□□□ -0.19
LTBP3-201ENST00000301873 TACC2O95359 2948 aa13.84□□□□□ -0.19
LTBP3-201ENST00000301873 RPL37AP61513 92 aaKnown RBP13.84□□□□□ -0.19
LTBP3-201ENST00000301873 KRTAP10-3P60369 221 aa13.84□□□□□ -0.19
LTBP3-201ENST00000301873 PRR34Q9NV39 138 aa13.83□□□□□ -0.2
LTBP3-201ENST00000301873 A0A1B0GW54 56 aa13.82□□□□□ -0.2
LTBP3-201ENST00000301873 BCE1O60756 84 aa13.81□□□□□ -0.2
LTBP3-201ENST00000301873 KRTAP10-11P60412 298 aa13.8□□□□□ -0.2
LTBP3-201ENST00000301873 ZNF575Q86XF7 245 aa13.8□□□□□ -0.2
LTBP3-201ENST00000301873 BAHCC1Q9P281 2608 aa13.8□□□□□ -0.2
LTBP3-201ENST00000301873 RTL8CO15255 209 aa13.79□□□□□ -0.2
LTBP3-201ENST00000301873 LINC00528Q8N1L1 170 aa13.79□□□□□ -0.2
LTBP3-201ENST00000301873 LIMD2Q9BT23 127 aa13.78□□□□□ -0.2
LTBP3-201ENST00000301873 EYSQ5T1H1 3165 aa13.78□□□□□ -0.2
LTBP3-201ENST00000301873 TRBV7-4A0A0J9YYF1 115 aa13.77□□□□□ -0.21
LTBP3-201ENST00000301873 NSD1Q96L73 2696 aaPredicted RBP13.76□□□□□ -0.21
LTBP3-201ENST00000301873 SPTBN5Q9NRC6 3674 aaKnown RBP13.76□□□□□ -0.21
LTBP3-201ENST00000301873 K7EIL1 84 aa13.75□□□□□ -0.21
LTBP3-201ENST00000301873 C15orf56Q8N910 161 aa13.74□□□□□ -0.21
LTBP3-201ENST00000301873 KCNQ1DNQ9H478 68 aa13.74□□□□□ -0.21
LTBP3-201ENST00000301873 LINC00612Q8N6U2 182 aa13.74□□□□□ -0.21
LTBP3-201ENST00000301873 BOD1L1Q8NFC6 3051 aa13.74□□□□□ -0.21
LTBP3-201ENST00000301873 KRTAP1-3Q8IUG1 177 aa13.73□□□□□ -0.21
LTBP3-201ENST00000301873 IGLV1-50A0A075B6I6 118 aa13.72□□□□□ -0.21
LTBP3-201ENST00000301873 TP53AIP1Q9HCN2 124 aa13.72□□□□□ -0.21
LTBP3-201ENST00000301873 C4orf26Q17RF5 130 aa13.72□□□□□ -0.21
LTBP3-201ENST00000301873 IGSF10Q6WRI0 2623 aa13.72□□□□□ -0.21
LTBP3-201ENST00000301873 TRAV22A0A0B4J277 110 aa13.72□□□□□ -0.21
LTBP3-201ENST00000301873 K7EQZ3 153 aa13.71□□□□□ -0.22
LTBP3-201ENST00000301873 FLNCQ14315 2725 aa13.71□□□□□ -0.22
LTBP3-201ENST00000301873 KALRNO60229 2985 aa13.7□□□□□ -0.22
LTBP3-201ENST00000301873 A0A0G2JQZ4 141 aa13.7□□□□□ -0.22
LTBP3-201ENST00000301873 A0A1W2PNN7 141 aa13.7□□□□□ -0.22
LTBP3-201ENST00000301873 C9orf129Q5T035 196 aaKnown RBP13.7□□□□□ -0.22
LTBP3-201ENST00000301873 RPS28P62857 69 aaKnown RBP13.69□□□□□ -0.22
LTBP3-201ENST00000301873 ATMQ13315 3056 aa13.68□□□□□ -0.22
LTBP3-201ENST00000301873 Q8N377 158 aa13.66□□□□□ -0.22
LTBP3-201ENST00000301873 SPAG11AQ6PDA7 123 aa13.66□□□□□ -0.22
LTBP3-201ENST00000301873 KRTAP1-1Q07627 177 aa13.65□□□□□ -0.22
LTBP3-201ENST00000301873 CR1P17927 2039 aa13.64□□□□□ -0.23
LTBP3-201ENST00000301873 ADGRG4Q8IZF6 3080 aa13.63□□□□□ -0.23
LTBP3-201ENST00000301873 COL12A1Q99715 3063 aa13.61□□□□□ -0.23
LTBP3-201ENST00000301873 IGFL1Q6UW32 110 aa13.6□□□□□ -0.23
LTBP3-201ENST00000301873 CASC10Q5T4H9 136 aa13.6□□□□□ -0.23
LTBP3-201ENST00000301873 TYMSOSQ8TAI1 123 aa13.6□□□□□ -0.23
LTBP3-201ENST00000301873 C7orf65Q6ZTY9 151 aa13.6□□□□□ -0.23
LTBP3-201ENST00000301873 ITPR1Q14643 2758 aa13.59□□□□□ -0.23
LTBP3-201ENST00000301873 LINC00313P59037 77 aa13.59□□□□□ -0.23
LTBP3-201ENST00000301873 STAB2Q8WWQ8 2551 aa13.58□□□□□ -0.23
LTBP3-201ENST00000301873 PRO0628Q9UI54 55 aa13.58□□□□□ -0.24
LTBP3-201ENST00000301873 FLG2Q5D862 2391 aaPredicted RBP13.58□□□□□ -0.24
LTBP3-201ENST00000301873 ACYP2P14621 99 aa13.57□□□□□ -0.24
LTBP3-201ENST00000301873 ASH1LQ9NR48 2969 aaKnown RBP13.57□□□□□ -0.24
LTBP3-201ENST00000301873 A8MWP4 228 aa13.57□□□□□ -0.24
LTBP3-201ENST00000301873 COL6A3P12111 3177 aa13.56□□□□□ -0.24
LTBP3-201ENST00000301873 A0A1B0GU69 56 aa13.56□□□□□ -0.24
LTBP3-201ENST00000301873 H3BPC8 53 aa13.56□□□□□ -0.24
LTBP3-201ENST00000301873 TNRC18O15417 2968 aaPredicted RBP13.55□□□□□ -0.24
LTBP3-201ENST00000301873 C9orf163Q8N9P6 203 aa13.53□□□□□ -0.24
LTBP3-201ENST00000301873 ERC2-IT1O76042 136 aa13.53□□□□□ -0.24
LTBP3-201ENST00000301873 WWC2-AS2Q96NR7 200 aa13.51□□□□□ -0.25
LTBP3-201ENST00000301873 CFAP47Q6ZTR5 3102 aa13.51□□□□□ -0.25
LTBP3-201ENST00000301873 PLA2G1BP04054 148 aaKnown RBP13.5□□□□□ -0.25
LTBP3-201ENST00000301873 ANAPC11Q9NYG5 84 aa13.5□□□□□ -0.25
LTBP3-201ENST00000301873 FAM104AQ969W3 186 aa13.48□□□□□ -0.25
LTBP3-201ENST00000301873 IGLV8-61A0A075B6I0 122 aa13.47□□□□□ -0.25
LTBP3-201ENST00000301873 MRPL34Q9BQ48 92 aaKnown RBP13.47□□□□□ -0.25
LTBP3-201ENST00000301873 ZZEF1O43149 2961 aa13.47□□□□□ -0.25
LTBP3-201ENST00000301873 PRR15Q8IV56 129 aa13.46□□□□□ -0.25
LTBP3-201ENST00000301873 TLX1NBP0CAT3 122 aa13.46□□□□□ -0.26
LTBP3-201ENST00000301873 Q96NJ1 140 aa13.45□□□□□ -0.26
LTBP3-201ENST00000301873 A0A1W2PNM2 257 aa13.45□□□□□ -0.26
LTBP3-201ENST00000301873 KLKP1Q107X0 134 aa13.44□□□□□ -0.26
LTBP3-201ENST00000301873 A0A087WTM6 91 aa13.44□□□□□ -0.26
LTBP3-201ENST00000301873 ZNF861PO60384 105 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms