RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 Q6ZRP5 223 aa3.78□□□□□ -1.8
CPSF2-201ENST00000298875 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
CPSF2-201ENST00000298875 FAM168BA1KXE4 195 aa3.78□□□□□ -1.8
CPSF2-201ENST00000298875 H3BNG1 76 aa3.78□□□□□ -1.8
CPSF2-201ENST00000298875 K7EQZ3 153 aa3.77□□□□□ -1.81
CPSF2-201ENST00000298875 LINC00315P59091 139 aa3.77□□□□□ -1.81
CPSF2-201ENST00000298875 DSCR10P59022 87 aa3.74□□□□□ -1.81
CPSF2-201ENST00000298875 LITAFQ99732 161 aa3.74□□□□□ -1.81
CPSF2-201ENST00000298875 OBSCN-AS1Q96MR7 158 aa3.73□□□□□ -1.81
CPSF2-201ENST00000298875 MRPL34Q9BQ48 92 aaKnown RBP3.73□□□□□ -1.81
CPSF2-201ENST00000298875 LINC00588Q9Y4M8 146 aa3.73□□□□□ -1.81
CPSF2-201ENST00000298875 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
CPSF2-201ENST00000298875 C9orf92A6NGG3 77 aa3.73□□□□□ -1.81
CPSF2-201ENST00000298875 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
CPSF2-201ENST00000298875 A0A087X002 238 aa3.72□□□□□ -1.81
CPSF2-201ENST00000298875 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
CPSF2-201ENST00000298875 USP24Q9UPU5 2620 aa3.72□□□□□ -1.81
CPSF2-201ENST00000298875 KCNQ1DNQ9H478 68 aa3.71□□□□□ -1.81
CPSF2-201ENST00000298875 Q8NAQ8 132 aa3.71□□□□□ -1.82
CPSF2-201ENST00000298875 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
CPSF2-201ENST00000298875 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
CPSF2-201ENST00000298875 KLK9Q2XQG4 91 aa3.7□□□□□ -1.82
CPSF2-201ENST00000298875 A0A1B0GVX0 72 aa3.7□□□□□ -1.82
CPSF2-201ENST00000298875 IGFL1Q6UW32 110 aa3.7□□□□□ -1.82
CPSF2-201ENST00000298875 A0A0D9SG42 100 aa3.69□□□□□ -1.82
CPSF2-201ENST00000298875 C8orf17Q9NRJ1 99 aa3.69□□□□□ -1.82
CPSF2-201ENST00000298875 FAM104AQ969W3 186 aa3.69□□□□□ -1.82
CPSF2-201ENST00000298875 C9orf129Q5T035 196 aaKnown RBP3.69□□□□□ -1.82
CPSF2-201ENST00000298875 OCR1Q9BZK8 76 aa3.68□□□□□ -1.82
CPSF2-201ENST00000298875 IGLV5-37A0A075B6J1 123 aa3.68□□□□□ -1.82
CPSF2-201ENST00000298875 PLA2G2DQ9UNK4 145 aa3.68□□□□□ -1.82
CPSF2-201ENST00000298875 DNAH10OSP0CZ25 163 aa3.67□□□□□ -1.82
CPSF2-201ENST00000298875 LINC00528Q8N1L1 170 aa3.67□□□□□ -1.82
CPSF2-201ENST00000298875 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
CPSF2-201ENST00000298875 A0A0G2JQZ4 141 aa3.67□□□□□ -1.82
CPSF2-201ENST00000298875 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
CPSF2-201ENST00000298875 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
CPSF2-201ENST00000298875 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
CPSF2-201ENST00000298875 Q5XG85 94 aa3.65□□□□□ -1.82
CPSF2-201ENST00000298875 KRTAP24-1Q3LI83 254 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 Q8N1X5 172 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 IGLV7-46A0A075B6I9 117 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 Q8N377 158 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 TNP2Q05952 138 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 C9orf163Q8N9P6 203 aa3.65□□□□□ -1.83
CPSF2-201ENST00000298875 MGAM2Q2M2H8 2515 aa3.64□□□□□ -1.83
CPSF2-201ENST00000298875 IGLV7-43P04211 117 aa3.64□□□□□ -1.83
CPSF2-201ENST00000298875 ZNF861PO60384 105 aa3.63□□□□□ -1.83
CPSF2-201ENST00000298875 HRES1P13985 223 aa3.63□□□□□ -1.83
CPSF2-201ENST00000298875 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
CPSF2-201ENST00000298875 KRTAP10-11P60412 298 aa3.63□□□□□ -1.83
CPSF2-201ENST00000298875 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
CPSF2-201ENST00000298875 CR1P17927 2039 aa3.62□□□□□ -1.83
CPSF2-201ENST00000298875 IGLV5-48A0A075B6I7 105 aa3.62□□□□□ -1.83
CPSF2-201ENST00000298875 TLX1NBP0CAT3 122 aa3.62□□□□□ -1.83
CPSF2-201ENST00000298875 M0R2T5 61 aa3.62□□□□□ -1.83
CPSF2-201ENST00000298875 MAST4O15021 2626 aa3.61□□□□□ -1.83
CPSF2-201ENST00000298875 ZNF575Q86XF7 245 aa3.61□□□□□ -1.83
CPSF2-201ENST00000298875 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
CPSF2-201ENST00000298875 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
CPSF2-201ENST00000298875 KRTAP16-1A8MUX0 517 aa3.6□□□□□ -1.83
CPSF2-201ENST00000298875 STAB1Q9NY15 2570 aa3.6□□□□□ -1.83
CPSF2-201ENST00000298875 A0A1B0GU33 70 aa3.6□□□□□ -1.83
CPSF2-201ENST00000298875 SPRR4Q96PI1 79 aa3.59□□□□□ -1.83
CPSF2-201ENST00000298875 Q5VV11 94 aa3.59□□□□□ -1.84
CPSF2-201ENST00000298875 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
CPSF2-201ENST00000298875 ATRQ13535 2644 aa3.58□□□□□ -1.84
CPSF2-201ENST00000298875 A0A087WTM6 91 aa3.58□□□□□ -1.84
CPSF2-201ENST00000298875 Q6ZSA8 131 aa3.58□□□□□ -1.84
CPSF2-201ENST00000298875 NOTCH1P46531 2555 aa3.58□□□□□ -1.84
CPSF2-201ENST00000298875 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
CPSF2-201ENST00000298875 HECTD1Q9ULT8 2610 aa3.57□□□□□ -1.84
CPSF2-201ENST00000298875 PSORS1C2Q9UIG4 136 aa3.57□□□□□ -1.84
CPSF2-201ENST00000298875 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
CPSF2-201ENST00000298875 NBEAL1Q6ZS30 2694 aa3.56□□□□□ -1.84
CPSF2-201ENST00000298875 FP248Q71RG6 208 aaPredicted RBP3.56□□□□□ -1.84
CPSF2-201ENST00000298875 GOLGB1Q14789 3259 aaKnown RBP3.56□□□□□ -1.84
CPSF2-201ENST00000298875 K7EIL1 84 aa3.56□□□□□ -1.84
CPSF2-201ENST00000298875 KRTAP10-3P60369 221 aa3.55□□□□□ -1.84
CPSF2-201ENST00000298875 PRR26Q8N8Z3 221 aa3.55□□□□□ -1.84
CPSF2-201ENST00000298875 CASC10Q5T4H9 136 aa3.55□□□□□ -1.84
CPSF2-201ENST00000298875 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
CPSF2-201ENST00000298875 STAB2Q8WWQ8 2551 aa3.54□□□□□ -1.84
CPSF2-201ENST00000298875 GIG44P09565 113 aaPredicted RBP3.54□□□□□ -1.84
CPSF2-201ENST00000298875 C19orf73Q9NVV2 129 aa3.53□□□□□ -1.84
CPSF2-201ENST00000298875 SRCAPQ6ZRS2 3230 aa3.53□□□□□ -1.85
CPSF2-201ENST00000298875 UNC79Q9P2D8 2635 aa3.53□□□□□ -1.85
CPSF2-201ENST00000298875 FAM229BQ4G0N7 80 aa3.52□□□□□ -1.85
CPSF2-201ENST00000298875 ROMO1P60602 79 aa3.52□□□□□ -1.85
CPSF2-201ENST00000298875 CNBPP62633 177 aaKnown RBP3.52□□□□□ -1.85
CPSF2-201ENST00000298875 CSAG1Q6PB30 78 aa3.52□□□□□ -1.85
CPSF2-201ENST00000298875 A0A096LNT2 108 aa3.51□□□□□ -1.85
CPSF2-201ENST00000298875 HELZ2Q9BYK8 2649 aaKnown RBP3.5□□□□□ -1.85
CPSF2-201ENST00000298875 CENPEQ02224 2701 aa3.5□□□□□ -1.85
CPSF2-201ENST00000298875 A6NN06 94 aa3.49□□□□□ -1.85
CPSF2-201ENST00000298875 FLNAP21333 2647 aaKnown RBP3.49□□□□□ -1.85
CPSF2-201ENST00000298875 S4R3F8 94 aa3.49□□□□□ -1.85
CPSF2-201ENST00000298875 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
CPSF2-201ENST00000298875 UTRNP46939 3433 aa3.48□□□□□ -1.85
CPSF2-201ENST00000298875 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms