RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 VAMP8Q9BV40 100 aa3.62□□□□□ -1.83
SSX3-201ENST00000298396 IGKV2-28A0A075B6P5 120 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 RPL37AP8A6NKH3 93 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 NCR3O14931 201 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 DLEU1O43261 78 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 IGKV2D-28P01615 120 aa3.61□□□□□ -1.83
SSX3-201ENST00000298396 IGLV1-50A0A075B6I6 118 aa3.6□□□□□ -1.83
SSX3-201ENST00000298396 TMEM238C9JI98 176 aa3.6□□□□□ -1.83
SSX3-201ENST00000298396 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
SSX3-201ENST00000298396 MUSTN1Q8IVN3 82 aa3.6□□□□□ -1.83
SSX3-201ENST00000298396 NKAPP1Q8N9T2 125 aa3.6□□□□□ -1.83
SSX3-201ENST00000298396 SPANXB1Q9NS25 103 aaPredicted RBP3.6□□□□□ -1.83
SSX3-201ENST00000298396 TRBV10-3A0A0K0K1G6 114 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 M0R378 163 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 NDUFC2O95298 119 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 SMIM6P0DI80 62 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 UBE2BP63146 152 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 RPL24P83731 157 aaKnown RBP3.59□□□□□ -1.83
SSX3-201ENST00000298396 SRSF9Q13242 221 aaKnown RBP eCLIP3.59□□□□□ -1.83
SSX3-201ENST00000298396 SLC25A34Q6PIV7 304 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 KRTAP13-1Q8IUC0 172 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 LINC00337Q8N6G1 96 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 Q8N9P0 234 aaPredicted RBP3.59□□□□□ -1.83
SSX3-201ENST00000298396 PPDPFQ9H3Y8 114 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 HIGD1BQ9P298 99 aa3.59□□□□□ -1.83
SSX3-201ENST00000298396 TRBV10-2A0A0K0K1G8 114 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 KRTAP4-16G5E9R7 235 aaPredicted RBP3.58□□□□□ -1.84
SSX3-201ENST00000298396 IGLV6-57P01721 117 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 IGLV7-43P04211 117 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 IFITM1P13164 125 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 LBHQ53QV2 105 aaPredicted RBP3.58□□□□□ -1.84
SSX3-201ENST00000298396 C1orf137Q5JT78 98 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 PRO1933Q9H354 126 aa3.58□□□□□ -1.84
SSX3-201ENST00000298396 BCE1O60756 84 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 SPRR1AP35321 89 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 Q6ZVH6 145 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 MIEN1Q9BRT3 115 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 TMEM126AQ9H061 195 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 KCNQ1DNQ9H478 68 aa3.57□□□□□ -1.84
SSX3-201ENST00000298396 DMBT1Q9UGM3 2413 aaPredicted RBP3.57□□□□□ -1.84
SSX3-201ENST00000298396 A4D1N5 150 aa3.56□□□□□ -1.84
SSX3-201ENST00000298396 INAFM2P0DMQ5 153 aa3.56□□□□□ -1.84
SSX3-201ENST00000298396 DDTP30046 118 aa3.56□□□□□ -1.84
SSX3-201ENST00000298396 REG3GQ6UW15 175 aa3.56□□□□□ -1.84
SSX3-201ENST00000298396 KRTAP1-4P0C5Y4 121 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 FXYD2P54710 66 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 S100A12P80511 92 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 PRLHP81277 87 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 LINC00518Q8N0U6 118 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 C12orf57Q99622 126 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 UQCR10Q9UDW1 63 aa3.55□□□□□ -1.84
SSX3-201ENST00000298396 TRAV23DV6A0A075B6W5 121 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 ZNF861PO60384 105 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 CFC1BP0CG36 223 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 CFC1P0CG37 223 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 SPINK6Q6UWN8 80 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 FAM19A1Q7Z5A9 133 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 CEND1Q8N111 149 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 SMCR5Q8TEV8 140 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 Q9BRP9 147 aa3.54□□□□□ -1.84
SSX3-201ENST00000298396 H0Y9J4 135 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 ZNF73O43830 326 aaPredicted RBP3.53□□□□□ -1.84
SSX3-201ENST00000298396 ERC2-IT1O76042 136 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 TAL2Q16559 108 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 S100A7L2Q5SY68 101 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
SSX3-201ENST00000298396 HERC1Q15751 4861 aa3.53□□□□□ -1.85
SSX3-201ENST00000298396 RPL13AP40429 203 aaKnown RBP3.52□□□□□ -1.85
SSX3-201ENST00000298396 UBE2AP49459 152 aa3.52□□□□□ -1.85
SSX3-201ENST00000298396 HSD52Q0P140 79 aa3.52□□□□□ -1.85
SSX3-201ENST00000298396 Q6ZRX8 168 aa3.52□□□□□ -1.85
SSX3-201ENST00000298396 OR13C6PQ8NH95 151 aa3.52□□□□□ -1.85
SSX3-201ENST00000298396 SMIM11BQ8TCY0 68 aa3.52□□□□□ -1.85
SSX3-201ENST00000298396 TRAV13-2A0A0B4J235 113 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 A0A0B4J2C4 111 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 ETDCA0A1B0GVM5 59 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 A0A1B0GWB2 263 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 A6NDN8 102 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 KRTAP29-1A8MX34 341 aaPredicted RBP3.51□□□□□ -1.85
SSX3-201ENST00000298396 K7ERJ3 54 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 RPL28P46779 137 aaKnown RBP3.51□□□□□ -1.85
SSX3-201ENST00000298396 CTAG1AP78358 180 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 C6orf99Q4VX62 202 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 BVES-AS1Q5T3Y7 98 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 DIRC1Q969H9 104 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
SSX3-201ENST00000298396 A0A087X002 238 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 ELOF1P60002 83 aaKnown RBP3.5□□□□□ -1.85
SSX3-201ENST00000298396 KRTAP13-2Q52LG2 175 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 LCE1AQ5T7P2 110 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 PRR26Q8N8Z3 221 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 LINC01600Q96MT4 127 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 HIGD2AQ9BW72 106 aa3.5□□□□□ -1.85
SSX3-201ENST00000298396 TRBV7-6A0A0J9YX20 115 aa3.49□□□□□ -1.85
SSX3-201ENST00000298396 HINT1P49773 126 aaPredicted RBP3.49□□□□□ -1.85
SSX3-201ENST00000298396 KRTAP10-8P60410 259 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms