RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 RPL28P46779 137 aaKnown RBP13.76□□□□□ -0.21
LINC01116-201ENST00000295549 CEND1Q8N111 149 aa13.76□□□□□ -0.21
LINC01116-201ENST00000295549 FAM19A1Q7Z5A9 133 aa13.75□□□□□ -0.21
LINC01116-201ENST00000295549 A6NDN8 102 aa13.74□□□□□ -0.21
LINC01116-201ENST00000295549 UBE2AP49459 152 aa13.74□□□□□ -0.21
LINC01116-201ENST00000295549 ZNF73O43830 326 aaPredicted RBP13.73□□□□□ -0.21
LINC01116-201ENST00000295549 HSD52Q0P140 79 aa13.73□□□□□ -0.21
LINC01116-201ENST00000295549 H0Y9J4 135 aa13.73□□□□□ -0.21
LINC01116-201ENST00000295549 DIRC1Q969H9 104 aa13.73□□□□□ -0.21
LINC01116-201ENST00000295549 ETDCA0A1B0GVM5 59 aa13.72□□□□□ -0.21
LINC01116-201ENST00000295549 FLG2Q5D862 2391 aaPredicted RBP13.71□□□□□ -0.21
LINC01116-201ENST00000295549 PRLHP81277 87 aa13.71□□□□□ -0.22
LINC01116-201ENST00000295549 PCLOQ9Y6V0 5065 aa13.7□□□□□ -0.22
LINC01116-201ENST00000295549 TMEM238LA0A1B0GVL6 79 aa13.69□□□□□ -0.22
LINC01116-201ENST00000295549 A6NJY4 79 aa13.69□□□□□ -0.22
LINC01116-201ENST00000295549 CFC1BP0CG36 223 aa13.69□□□□□ -0.22
LINC01116-201ENST00000295549 CFC1P0CG37 223 aa13.69□□□□□ -0.22
LINC01116-201ENST00000295549 MYCBP2O75592 4640 aa13.68□□□□□ -0.22
LINC01116-201ENST00000295549 B5MCH6 92 aa13.68□□□□□ -0.22
LINC01116-201ENST00000295549 TSTD3H0UI37 97 aa13.68□□□□□ -0.22
LINC01116-201ENST00000295549 FXYD2P54710 66 aa13.68□□□□□ -0.22
LINC01116-201ENST00000295549 A0A0B4J2C4 111 aa13.66□□□□□ -0.22
LINC01116-201ENST00000295549 HINT1P49773 126 aaPredicted RBP13.66□□□□□ -0.22
LINC01116-201ENST00000295549 Q6ZRX8 168 aa13.66□□□□□ -0.22
LINC01116-201ENST00000295549 C6orf99Q4VX62 202 aa13.64□□□□□ -0.23
LINC01116-201ENST00000295549 SMIM11BQ8TCY0 68 aa13.64□□□□□ -0.23
LINC01116-201ENST00000295549 RAB37Q96AX2 223 aa13.64□□□□□ -0.23
LINC01116-201ENST00000295549 TRBV7-6A0A0J9YX20 115 aa13.63□□□□□ -0.23
LINC01116-201ENST00000295549 RPL13AP40429 203 aaKnown RBP13.63□□□□□ -0.23
LINC01116-201ENST00000295549 HIGD2AQ9BW72 106 aa13.62□□□□□ -0.23
LINC01116-201ENST00000295549 LRP1Q07954 4544 aaKnown RBP13.61□□□□□ -0.23
LINC01116-201ENST00000295549 ELOF1P60002 83 aaKnown RBP13.6□□□□□ -0.23
LINC01116-201ENST00000295549 SMCR5Q8TEV8 140 aa13.6□□□□□ -0.23
LINC01116-201ENST00000295549 FAT3Q8TDW7 4589 aa13.59□□□□□ -0.23
LINC01116-201ENST00000295549 OXTP01178 125 aa13.59□□□□□ -0.23
LINC01116-201ENST00000295549 CTAG1AP78358 180 aa13.59□□□□□ -0.23
LINC01116-201ENST00000295549 Q9BRP9 147 aa13.59□□□□□ -0.23
LINC01116-201ENST00000295549 COX7BP24311 80 aa13.58□□□□□ -0.24
LINC01116-201ENST00000295549 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
LINC01116-201ENST00000295549 PRO1854Q9UHT4 67 aa13.58□□□□□ -0.24
LINC01116-201ENST00000295549 A0A1B0GWB2 263 aa13.57□□□□□ -0.24
LINC01116-201ENST00000295549 NHP2Q9NX24 153 aaKnown RBP13.57□□□□□ -0.24
LINC01116-201ENST00000295549 KRTAP29-1A8MX34 341 aaPredicted RBP13.56□□□□□ -0.24
LINC01116-201ENST00000295549 KRTAP1-4P0C5Y4 121 aa13.56□□□□□ -0.24
LINC01116-201ENST00000295549 LINC01600Q96MT4 127 aa13.56□□□□□ -0.24
LINC01116-201ENST00000295549 DHRS4-AS1Q9P1J3 65 aa13.55□□□□□ -0.24
LINC01116-201ENST00000295549 VAMP3Q15836 100 aa13.54□□□□□ -0.24
LINC01116-201ENST00000295549 H7C2G1 150 aa13.53□□□□□ -0.24
LINC01116-201ENST00000295549 M0R143 59 aa13.53□□□□□ -0.24
LINC01116-201ENST00000295549 ERC2-IT1O76042 136 aa13.52□□□□□ -0.25
LINC01116-201ENST00000295549 ZNF706Q9Y5V0 76 aaPredicted RBP13.51□□□□□ -0.25
LINC01116-201ENST00000295549 K7ERJ3 54 aa13.49□□□□□ -0.25
LINC01116-201ENST00000295549 SPRR4Q96PI1 79 aa13.49□□□□□ -0.25
LINC01116-201ENST00000295549 Q1RN00 199 aa13.48□□□□□ -0.25
LINC01116-201ENST00000295549 TNXBP22105 4242 aa13.45□□□□□ -0.26
LINC01116-201ENST00000295549 FAM229BQ4G0N7 80 aa13.45□□□□□ -0.26
LINC01116-201ENST00000295549 MT1HL1P0DM35 61 aa13.44□□□□□ -0.26
LINC01116-201ENST00000295549 LINC00575Q6W349 94 aa13.44□□□□□ -0.26
LINC01116-201ENST00000295549 ANAPC11Q9NYG5 84 aa13.44□□□□□ -0.26
LINC01116-201ENST00000295549 KRTAP10-8P60410 259 aa13.43□□□□□ -0.26
LINC01116-201ENST00000295549 LINC00483Q53H64 154 aa13.43□□□□□ -0.26
LINC01116-201ENST00000295549 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
LINC01116-201ENST00000295549 H0YGX0 51 aa13.42□□□□□ -0.26
LINC01116-201ENST00000295549 J3QL48 77 aa13.42□□□□□ -0.26
LINC01116-201ENST00000295549 SLC25A20O43772 301 aa13.42□□□□□ -0.26
LINC01116-201ENST00000295549 CRYGAP11844 174 aa13.42□□□□□ -0.26
LINC01116-201ENST00000295549 ST20-AS1Q8NBB2 130 aa13.41□□□□□ -0.26
LINC01116-201ENST00000295549 A0A087X002 238 aa13.4□□□□□ -0.26
LINC01116-201ENST00000295549 TSPAN13O95857 204 aa13.4□□□□□ -0.26
LINC01116-201ENST00000295549 GAGE2AQ6NT46 116 aa13.4□□□□□ -0.26
LINC01116-201ENST00000295549 TRIAP1O43715 76 aa13.39□□□□□ -0.27
LINC01116-201ENST00000295549 DMBT1Q9UGM3 2413 aaPredicted RBP13.39□□□□□ -0.27
LINC01116-201ENST00000295549 hADV29S1A0JD25 119 aa13.38□□□□□ -0.27
LINC01116-201ENST00000295549 PSMB2P49721 201 aa13.36□□□□□ -0.27
LINC01116-201ENST00000295549 SPRR1BP22528 89 aa13.35□□□□□ -0.27
LINC01116-201ENST00000295549 KRTAP13-2Q52LG2 175 aa13.35□□□□□ -0.27
LINC01116-201ENST00000295549 COX6CP09669 75 aa13.34□□□□□ -0.27
LINC01116-201ENST00000295549 BATFQ16520 125 aa13.34□□□□□ -0.27
LINC01116-201ENST00000295549 SNCGO76070 127 aa13.33□□□□□ -0.28
LINC01116-201ENST00000295549 IGLV5-48A0A075B6I7 105 aa13.32□□□□□ -0.28
LINC01116-201ENST00000295549 FAM218AQ96MZ4 157 aa13.32□□□□□ -0.28
LINC01116-201ENST00000295549 TEX49A0A1B0GTD5 131 aa13.31□□□□□ -0.28
LINC01116-201ENST00000295549 A0A1B0GX51 115 aa13.31□□□□□ -0.28
LINC01116-201ENST00000295549 LINC01547P58512 204 aaPredicted RBP13.31□□□□□ -0.28
LINC01116-201ENST00000295549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.3□□□□□ -0.28
LINC01116-201ENST00000295549 Q6ZQY7 126 aa13.3□□□□□ -0.28
LINC01116-201ENST00000295549 TYMSOSQ8TAI1 123 aa13.3□□□□□ -0.28
LINC01116-201ENST00000295549 DEFB105AQ8NG35 78 aa13.3□□□□□ -0.28
LINC01116-201ENST00000295549 C3orf22Q8N5N4 141 aa13.29□□□□□ -0.28
LINC01116-201ENST00000295549 CLEC2BQ92478 149 aa13.27□□□□□ -0.29
LINC01116-201ENST00000295549 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
LINC01116-201ENST00000295549 Q8N377 158 aa13.26□□□□□ -0.29
LINC01116-201ENST00000295549 SNHG12Q9BXW3 62 aa13.25□□□□□ -0.29
LINC01116-201ENST00000295549 LAMTOR3Q9UHA4 124 aa13.24□□□□□ -0.29
LINC01116-201ENST00000295549 IGLV9-49A0A0B4J1Y8 123 aa13.22□□□□□ -0.29
LINC01116-201ENST00000295549 PCP4L1A6NKN8 68 aa13.22□□□□□ -0.29
LINC01116-201ENST00000295549 OCIAD2Q56VL3 154 aa13.22□□□□□ -0.29
LINC01116-201ENST00000295549 SMIM29Q86T20 159 aa13.22□□□□□ -0.29
LINC01116-201ENST00000295549 PPDPFLQ8WWR9 84 aa13.22□□□□□ -0.29
LINC01116-201ENST00000295549 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms