RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 LINC00528Q8N1L1 170 aa11.08□□□□□ -0.64
CHRNE-201ENST00000293780 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
CHRNE-201ENST00000293780 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
CHRNE-201ENST00000293780 C1orf43Q9BWL3 253 aa11.07□□□□□ -0.64
CHRNE-201ENST00000293780 BCE1O60756 84 aa11.06□□□□□ -0.64
CHRNE-201ENST00000293780 CXCL6P80162 114 aa11.04□□□□□ -0.64
CHRNE-201ENST00000293780 SERP1Q9Y6X1 66 aa11.04□□□□□ -0.64
CHRNE-201ENST00000293780 SNURFQ9Y675 71 aa11.03□□□□□ -0.64
CHRNE-201ENST00000293780 KLKP1Q107X0 134 aa11.02□□□□□ -0.64
CHRNE-201ENST00000293780 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
CHRNE-201ENST00000293780 SYCNQ0VAF6 134 aa11.02□□□□□ -0.65
CHRNE-201ENST00000293780 SERTAD4-AS1Q5TG53 156 aa11.02□□□□□ -0.65
CHRNE-201ENST00000293780 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
CHRNE-201ENST00000293780 LINC01556Q5JQF7 62 aa11.01□□□□□ -0.65
CHRNE-201ENST00000293780 RMI2Q96E14 147 aa11.01□□□□□ -0.65
CHRNE-201ENST00000293780 DNAH3Q8TD57 4116 aa11□□□□□ -0.65
CHRNE-201ENST00000293780 DEFB105AQ8NG35 78 aa10.99□□□□□ -0.65
CHRNE-201ENST00000293780 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
CHRNE-201ENST00000293780 F8WEM9 126 aa10.98□□□□□ -0.65
CHRNE-201ENST00000293780 Q8N9L7 120 aa10.97□□□□□ -0.65
CHRNE-201ENST00000293780 NKAPP1Q8N9T2 125 aa10.97□□□□□ -0.65
CHRNE-201ENST00000293780 C11orf45Q8TAV5 145 aa10.97□□□□□ -0.65
CHRNE-201ENST00000293780 KCNQ1DNQ9H478 68 aa10.96□□□□□ -0.65
CHRNE-201ENST00000293780 DNAH1Q9P2D7 4330 aa10.96□□□□□ -0.65
CHRNE-201ENST00000293780 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.66
CHRNE-201ENST00000293780 STAB1Q9NY15 2570 aa10.96□□□□□ -0.66
CHRNE-201ENST00000293780 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
CHRNE-201ENST00000293780 RPL37AP8A6NKH3 93 aa10.94□□□□□ -0.66
CHRNE-201ENST00000293780 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
CHRNE-201ENST00000293780 Q8N377 158 aa10.94□□□□□ -0.66
CHRNE-201ENST00000293780 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
CHRNE-201ENST00000293780 F8WDY8 70 aa10.92□□□□□ -0.66
CHRNE-201ENST00000293780 DNAH10OSP0CZ25 163 aa10.92□□□□□ -0.66
CHRNE-201ENST00000293780 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
CHRNE-201ENST00000293780 LINC00336Q6ZUF6 198 aa10.91□□□□□ -0.66
CHRNE-201ENST00000293780 NREPQ16612 68 aa10.91□□□□□ -0.66
CHRNE-201ENST00000293780 COL6A5A8TX70 2615 aa10.9□□□□□ -0.66
CHRNE-201ENST00000293780 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
CHRNE-201ENST00000293780 SMIM26A0A096LP01 95 aa10.9□□□□□ -0.67
CHRNE-201ENST00000293780 BPY2O14599 106 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 NOTCH1P46531 2555 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 NDUFC1O43677 76 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 IGKV4-1P06312 121 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 Q9BRP9 147 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
CHRNE-201ENST00000293780 KRTAP7-1Q8IUC3 87 aa10.87□□□□□ -0.67
CHRNE-201ENST00000293780 TLX1NBP0CAT3 122 aa10.87□□□□□ -0.67
CHRNE-201ENST00000293780 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
CHRNE-201ENST00000293780 PRO0628Q9UI54 55 aa10.86□□□□□ -0.67
CHRNE-201ENST00000293780 KRTAP4-16G5E9R7 235 aaPredicted RBP10.86□□□□□ -0.67
CHRNE-201ENST00000293780 IGLV1-50A0A075B6I6 118 aa10.85□□□□□ -0.67
CHRNE-201ENST00000293780 IGLV5-48A0A075B6I7 105 aa10.85□□□□□ -0.67
CHRNE-201ENST00000293780 Q6ZRX8 168 aa10.85□□□□□ -0.67
CHRNE-201ENST00000293780 PRB2P02812 416 aaPredicted RBP10.84□□□□□ -0.67
CHRNE-201ENST00000293780 LINC00474Q9P2X8 69 aa10.84□□□□□ -0.67
CHRNE-201ENST00000293780 TMEM254Q8TBM7 123 aa10.84□□□□□ -0.67
CHRNE-201ENST00000293780 PLA2G2DQ9UNK4 145 aa10.84□□□□□ -0.67
CHRNE-201ENST00000293780 HUWE1Q7Z6Z7 4374 aaKnown RBP10.84□□□□□ -0.67
CHRNE-201ENST00000293780 LYSTQ99698 3801 aa10.84□□□□□ -0.67
CHRNE-201ENST00000293780 DHRS4-AS1Q9P1J3 65 aa10.83□□□□□ -0.68
CHRNE-201ENST00000293780 DNAH10Q8IVF4 4471 aa10.83□□□□□ -0.68
CHRNE-201ENST00000293780 ETDCA0A1B0GVM5 59 aa10.82□□□□□ -0.68
CHRNE-201ENST00000293780 A0A1W2PNM2 257 aa10.82□□□□□ -0.68
CHRNE-201ENST00000293780 ATP5EP56381 51 aaPredicted RBP10.82□□□□□ -0.68
CHRNE-201ENST00000293780 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
CHRNE-201ENST00000293780 SPRR1AP35321 89 aa10.81□□□□□ -0.68
CHRNE-201ENST00000293780 PRYO14603 147 aa10.81□□□□□ -0.68
CHRNE-201ENST00000293780 IGLV5-37A0A075B6J1 123 aa10.8□□□□□ -0.68
CHRNE-201ENST00000293780 MDFIQ99750 246 aa10.79□□□□□ -0.68
CHRNE-201ENST00000293780 TNP2Q05952 138 aa10.79□□□□□ -0.68
CHRNE-201ENST00000293780 C1orf137Q5JT78 98 aa10.79□□□□□ -0.68
CHRNE-201ENST00000293780 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
CHRNE-201ENST00000293780 MRPL55Q7Z7F7 128 aaKnown RBP10.78□□□□□ -0.68
CHRNE-201ENST00000293780 OCR1Q9BZK8 76 aa10.78□□□□□ -0.68
CHRNE-201ENST00000293780 UBE2BP63146 152 aa10.75□□□□□ -0.69
CHRNE-201ENST00000293780 FAM229BQ4G0N7 80 aa10.74□□□□□ -0.69
CHRNE-201ENST00000293780 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
CHRNE-201ENST00000293780 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
CHRNE-201ENST00000293780 Q8NBF4 154 aa10.74□□□□□ -0.69
CHRNE-201ENST00000293780 A0A0G2JQZ4 141 aa10.73□□□□□ -0.69
CHRNE-201ENST00000293780 A0A1W2PNN7 141 aa10.73□□□□□ -0.69
CHRNE-201ENST00000293780 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
CHRNE-201ENST00000293780 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.7
CHRNE-201ENST00000293780 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
CHRNE-201ENST00000293780 MPLKIPQ8TAP9 179 aa10.7□□□□□ -0.7
CHRNE-201ENST00000293780 FAM30AQ9NZY2 134 aa10.7□□□□□ -0.7
CHRNE-201ENST00000293780 BRK1Q8WUW1 75 aa10.69□□□□□ -0.7
CHRNE-201ENST00000293780 SPRR4Q96PI1 79 aa10.69□□□□□ -0.7
CHRNE-201ENST00000293780 HIGD2AQ9BW72 106 aa10.69□□□□□ -0.7
CHRNE-201ENST00000293780 PKIGQ9Y2B9 76 aa10.69□□□□□ -0.7
CHRNE-201ENST00000293780 CSMD3Q7Z407 3707 aa10.69□□□□□ -0.7
CHRNE-201ENST00000293780 A0A1B0GW54 56 aa10.68□□□□□ -0.7
CHRNE-201ENST00000293780 DSCR10P59022 87 aa10.68□□□□□ -0.7
CHRNE-201ENST00000293780 IGKV2-24A0A0C4DH68 120 aa10.66□□□□□ -0.7
CHRNE-201ENST00000293780 K7EIL1 84 aa10.66□□□□□ -0.7
CHRNE-201ENST00000293780 LINC00476Q8WZB0 136 aa10.66□□□□□ -0.7
CHRNE-201ENST00000293780 KRTAP1-5Q9BYS1 174 aa10.66□□□□□ -0.7
CHRNE-201ENST00000293780 A0A096LNI7 61 aa10.65□□□□□ -0.7
CHRNE-201ENST00000293780 K7EQZ3 153 aa10.65□□□□□ -0.7
CHRNE-201ENST00000293780 PRLHP81277 87 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms