RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 WIPF1O43516 503 aa8.31□□□□□ -1.08
SYNGAP1-201ENST00000293748 NANOS2P60321 138 aaKnown RBP8.31□□□□□ -1.08
SYNGAP1-201ENST00000293748 IGLV9-49A0A0B4J1Y8 123 aa8.31□□□□□ -1.08
SYNGAP1-201ENST00000293748 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
SYNGAP1-201ENST00000293748 Q6ZSN1 163 aa8.31□□□□□ -1.08
SYNGAP1-201ENST00000293748 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
SYNGAP1-201ENST00000293748 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
SYNGAP1-201ENST00000293748 C2orf48Q96LS8 159 aa8.3□□□□□ -1.08
SYNGAP1-201ENST00000293748 H0Y9P7 68 aa8.29□□□□□ -1.08
SYNGAP1-201ENST00000293748 NIPBLQ6KC79 2804 aaeCLIP8.28□□□□□ -1.08
SYNGAP1-201ENST00000293748 A0A087WSZ3 146 aa8.28□□□□□ -1.08
SYNGAP1-201ENST00000293748 HCG22E2RYF7 251 aa8.27□□□□□ -1.08
SYNGAP1-201ENST00000293748 LINC00315P59091 139 aa8.27□□□□□ -1.08
SYNGAP1-201ENST00000293748 C6orf223Q8N319 242 aa8.27□□□□□ -1.08
SYNGAP1-201ENST00000293748 LIMD2Q9BT23 127 aa8.27□□□□□ -1.09
SYNGAP1-201ENST00000293748 K7EIL1 84 aa8.26□□□□□ -1.09
SYNGAP1-201ENST00000293748 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
SYNGAP1-201ENST00000293748 CSMD1Q96PZ7 3565 aa8.26□□□□□ -1.09
SYNGAP1-201ENST00000293748 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
SYNGAP1-201ENST00000293748 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
SYNGAP1-201ENST00000293748 RETNQ9HD89 108 aa8.25□□□□□ -1.09
SYNGAP1-201ENST00000293748 PCOTHQ58A44 107 aa8.25□□□□□ -1.09
SYNGAP1-201ENST00000293748 Q9BRP9 147 aa8.24□□□□□ -1.09
SYNGAP1-201ENST00000293748 A8MTW9 85 aa8.23□□□□□ -1.09
SYNGAP1-201ENST00000293748 IGHV6-1A0A0B4J1U7 121 aa8.23□□□□□ -1.09
SYNGAP1-201ENST00000293748 A0A1B0GW54 56 aa8.22□□□□□ -1.09
SYNGAP1-201ENST00000293748 AKAP9Q99996 3911 aa8.21□□□□□ -1.09
SYNGAP1-201ENST00000293748 C11orf72Q8NBR9 251 aa8.21□□□□□ -1.09
SYNGAP1-201ENST00000293748 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.09
SYNGAP1-201ENST00000293748 CELSR1Q9NYQ6 3014 aa8.21□□□□□ -1.1
SYNGAP1-201ENST00000293748 CSMD2Q7Z408 3487 aa8.21□□□□□ -1.1
SYNGAP1-201ENST00000293748 MGAM2Q2M2H8 2515 aa8.21□□□□□ -1.1
SYNGAP1-201ENST00000293748 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
SYNGAP1-201ENST00000293748 ANK3Q12955 4377 aaKnown RBP8.19□□□□□ -1.1
SYNGAP1-201ENST00000293748 C4orf26Q17RF5 130 aa8.19□□□□□ -1.1
SYNGAP1-201ENST00000293748 Q6ZRU5 148 aa8.19□□□□□ -1.1
SYNGAP1-201ENST00000293748 FAM218AQ96MZ4 157 aa8.19□□□□□ -1.1
SYNGAP1-201ENST00000293748 MUC4Q99102 2169 aa8.18□□□□□ -1.1
SYNGAP1-201ENST00000293748 SMIM29Q86T20 159 aa8.18□□□□□ -1.1
SYNGAP1-201ENST00000293748 C19orf73Q9NVV2 129 aa8.18□□□□□ -1.1
SYNGAP1-201ENST00000293748 LYPD5Q6UWN5 251 aa8.18□□□□□ -1.1
SYNGAP1-201ENST00000293748 Q6ZTC4 211 aa8.17□□□□□ -1.1
SYNGAP1-201ENST00000293748 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
SYNGAP1-201ENST00000293748 DEFB116Q30KQ4 102 aa8.17□□□□□ -1.1
SYNGAP1-201ENST00000293748 LOC110117498A0A087WWA1 95 aa8.16□□□□□ -1.1
SYNGAP1-201ENST00000293748 NF1P21359 2839 aa8.16□□□□□ -1.1
SYNGAP1-201ENST00000293748 WWC2-AS2Q96NR7 200 aa8.16□□□□□ -1.1
SYNGAP1-201ENST00000293748 M0R2N4 97 aa8.15□□□□□ -1.1
SYNGAP1-201ENST00000293748 KIAA0087Q14695 138 aa8.15□□□□□ -1.1
SYNGAP1-201ENST00000293748 Q6ZQT0 140 aa8.15□□□□□ -1.1
SYNGAP1-201ENST00000293748 CIRBP-AS1Q8TBR5 109 aa8.15□□□□□ -1.1
SYNGAP1-201ENST00000293748 H3BPC8 53 aa8.15□□□□□ -1.11
SYNGAP1-201ENST00000293748 TP53AIP1Q9HCN2 124 aa8.14□□□□□ -1.11
SYNGAP1-201ENST00000293748 SMCR5Q8TEV8 140 aa8.12□□□□□ -1.11
SYNGAP1-201ENST00000293748 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
SYNGAP1-201ENST00000293748 TM2D3Q9BRN9 247 aa8.11□□□□□ -1.11
SYNGAP1-201ENST00000293748 ELOF1P60002 83 aaKnown RBP8.1□□□□□ -1.11
SYNGAP1-201ENST00000293748 PRLHP81277 87 aa8.1□□□□□ -1.11
SYNGAP1-201ENST00000293748 Q8NBF4 154 aa8.1□□□□□ -1.11
SYNGAP1-201ENST00000293748 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
SYNGAP1-201ENST00000293748 LITAFQ99732 161 aa8.09□□□□□ -1.11
SYNGAP1-201ENST00000293748 NUPR2A6NF83 97 aa8.09□□□□□ -1.11
SYNGAP1-201ENST00000293748 Q9UF83 564 aa8.08□□□□□ -1.12
SYNGAP1-201ENST00000293748 SPINK1P00995 79 aa8.08□□□□□ -1.12
SYNGAP1-201ENST00000293748 C6orf48Q9UBA6 75 aa8.08□□□□□ -1.12
SYNGAP1-201ENST00000293748 A0A1B0GU69 56 aa8.07□□□□□ -1.12
SYNGAP1-201ENST00000293748 ERC2-IT1O76042 136 aa8.07□□□□□ -1.12
SYNGAP1-201ENST00000293748 ZFHX3Q15911 3703 aa8.06□□□□□ -1.12
SYNGAP1-201ENST00000293748 ACYP2P14621 99 aa8.06□□□□□ -1.12
SYNGAP1-201ENST00000293748 LINC00167Q96N53 147 aa8.06□□□□□ -1.12
SYNGAP1-201ENST00000293748 LY6G6CO95867 125 aa8.04□□□□□ -1.12
SYNGAP1-201ENST00000293748 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
SYNGAP1-201ENST00000293748 RETNLBQ9BQ08 111 aa8.04□□□□□ -1.12
SYNGAP1-201ENST00000293748 TRAV22A0A0B4J277 110 aa8.04□□□□□ -1.12
SYNGAP1-201ENST00000293748 FBN1P35555 2871 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-201ENST00000293748 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
SYNGAP1-201ENST00000293748 ZNF469Q96JG9 3925 aaPredicted RBP8.03□□□□□ -1.12
SYNGAP1-201ENST00000293748 Q6ZRX8 168 aa8.02□□□□□ -1.13
SYNGAP1-201ENST00000293748 X6R8D5 127 aa8.02□□□□□ -1.13
SYNGAP1-201ENST00000293748 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
SYNGAP1-201ENST00000293748 H3BNG1 76 aa8□□□□□ -1.13
SYNGAP1-201ENST00000293748 IGKV2D-30A0A075B6S6 120 aa8□□□□□ -1.13
SYNGAP1-201ENST00000293748 IGKV2-30P06310 120 aa8□□□□□ -1.13
SYNGAP1-201ENST00000293748 SERTAD4-AS1Q5TG53 156 aa8□□□□□ -1.13
SYNGAP1-201ENST00000293748 GVQW2A0A096LPI5 108 aaPredicted RBP7.99□□□□□ -1.13
SYNGAP1-201ENST00000293748 KLKP1Q107X0 134 aa7.99□□□□□ -1.13
SYNGAP1-201ENST00000293748 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
SYNGAP1-201ENST00000293748 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
SYNGAP1-201ENST00000293748 NBEAL1Q6ZS30 2694 aa7.98□□□□□ -1.13
SYNGAP1-201ENST00000293748 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
SYNGAP1-201ENST00000293748 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
SYNGAP1-201ENST00000293748 IGLV6-57P01721 117 aa7.97□□□□□ -1.13
SYNGAP1-201ENST00000293748 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
SYNGAP1-201ENST00000293748 Q8NAQ8 132 aa7.97□□□□□ -1.13
SYNGAP1-201ENST00000293748 C7orf65Q6ZTY9 151 aa7.96□□□□□ -1.13
SYNGAP1-201ENST00000293748 CSNK1G2-AS1Q8NCQ2 148 aa7.95□□□□□ -1.14
SYNGAP1-201ENST00000293748 MOBPQ13875 183 aa7.94□□□□□ -1.14
SYNGAP1-201ENST00000293748 A8MUN3 132 aa7.93□□□□□ -1.14
SYNGAP1-201ENST00000293748 VPREB1P12018 145 aa7.93□□□□□ -1.14
SYNGAP1-201ENST00000293748 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms