RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 NHP2Q9NX24 153 aaKnown RBP10.59□□□□□ -0.71
SKP2-201ENST00000274254 CBY1Q9Y3M2 126 aa10.59□□□□□ -0.71
SKP2-201ENST00000274254 C1orf137Q5JT78 98 aa10.58□□□□□ -0.72
SKP2-201ENST00000274254 RAB37Q96AX2 223 aa10.58□□□□□ -0.72
SKP2-201ENST00000274254 KRTAP4-16G5E9R7 235 aaPredicted RBP10.58□□□□□ -0.72
SKP2-201ENST00000274254 BCE1O60756 84 aa10.58□□□□□ -0.72
SKP2-201ENST00000274254 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
SKP2-201ENST00000274254 Q5VSD8 79 aa10.57□□□□□ -0.72
SKP2-201ENST00000274254 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
SKP2-201ENST00000274254 ZNF73O43830 326 aaPredicted RBP10.56□□□□□ -0.72
SKP2-201ENST00000274254 PLA2G1BP04054 148 aaKnown RBP10.56□□□□□ -0.72
SKP2-201ENST00000274254 K7ERJ3 54 aa10.55□□□□□ -0.72
SKP2-201ENST00000274254 SMIM11BQ8TCY0 68 aa10.55□□□□□ -0.72
SKP2-201ENST00000274254 IGLV7-43P04211 117 aa10.54□□□□□ -0.72
SKP2-201ENST00000274254 KRTAP13-1Q8IUC0 172 aa10.53□□□□□ -0.72
SKP2-201ENST00000274254 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
SKP2-201ENST00000274254 DIRC1Q969H9 104 aa10.53□□□□□ -0.72
SKP2-201ENST00000274254 FAM19A1Q7Z5A9 133 aa10.52□□□□□ -0.73
SKP2-201ENST00000274254 ETDCA0A1B0GVM5 59 aa10.51□□□□□ -0.73
SKP2-201ENST00000274254 B5MCH6 92 aa10.51□□□□□ -0.73
SKP2-201ENST00000274254 H0Y9J4 135 aa10.51□□□□□ -0.73
SKP2-201ENST00000274254 H7C2G1 150 aa10.51□□□□□ -0.73
SKP2-201ENST00000274254 RPL28P46779 137 aaKnown RBP10.51□□□□□ -0.73
SKP2-201ENST00000274254 PRLHP81277 87 aa10.5□□□□□ -0.73
SKP2-201ENST00000274254 TRBV7-6A0A0J9YX20 115 aa10.49□□□□□ -0.73
SKP2-201ENST00000274254 ZNF861PO60384 105 aa10.49□□□□□ -0.73
SKP2-201ENST00000274254 UBE2AP49459 152 aa10.49□□□□□ -0.73
SKP2-201ENST00000274254 BATFQ16520 125 aa10.49□□□□□ -0.73
SKP2-201ENST00000274254 Q6ZRX8 168 aa10.49□□□□□ -0.73
SKP2-201ENST00000274254 SRRM2Q9UQ35 2752 aaKnown RBP10.49□□□□□ -0.73
SKP2-201ENST00000274254 ELOF1P60002 83 aaKnown RBP10.48□□□□□ -0.73
SKP2-201ENST00000274254 HERC2O95714 4834 aa10.47□□□□□ -0.73
SKP2-201ENST00000274254 Q1RN00 199 aa10.47□□□□□ -0.73
SKP2-201ENST00000274254 SNHG12Q9BXW3 62 aa10.47□□□□□ -0.73
SKP2-201ENST00000274254 TSPAN13O95857 204 aa10.46□□□□□ -0.74
SKP2-201ENST00000274254 COX7BP24311 80 aa10.46□□□□□ -0.74
SKP2-201ENST00000274254 Q9BRP9 147 aa10.45□□□□□ -0.74
SKP2-201ENST00000274254 KRTAP4-5Q9BYR2 181 aa10.45□□□□□ -0.74
SKP2-201ENST00000274254 SPINK6Q6UWN8 80 aa10.44□□□□□ -0.74
SKP2-201ENST00000274254 VAMP3Q15836 100 aa10.43□□□□□ -0.74
SKP2-201ENST00000274254 SMCR5Q8TEV8 140 aa10.43□□□□□ -0.74
SKP2-201ENST00000274254 TRIAP1O43715 76 aa10.43□□□□□ -0.74
SKP2-201ENST00000274254 HIGD2AQ9BW72 106 aa10.43□□□□□ -0.74
SKP2-201ENST00000274254 DHRS4-AS1Q9P1J3 65 aa10.4□□□□□ -0.74
SKP2-201ENST00000274254 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
SKP2-201ENST00000274254 INAFM2P0DMQ5 153 aa10.39□□□□□ -0.75
SKP2-201ENST00000274254 PSMB2P49721 201 aa10.39□□□□□ -0.75
SKP2-201ENST00000274254 H0YGX0 51 aa10.38□□□□□ -0.75
SKP2-201ENST00000274254 LINC00575Q6W349 94 aa10.38□□□□□ -0.75
SKP2-201ENST00000274254 TAX1BP3O14907 124 aa10.37□□□□□ -0.75
SKP2-201ENST00000274254 PKHD1L1Q86WI1 4243 aa10.36□□□□□ -0.75
SKP2-201ENST00000274254 COX6CP09669 75 aa10.36□□□□□ -0.75
SKP2-201ENST00000274254 COL5A1-AS1Q5SY13 56 aa10.36□□□□□ -0.75
SKP2-201ENST00000274254 FAM218AQ96MZ4 157 aa10.35□□□□□ -0.75
SKP2-201ENST00000274254 NAA38Q9BRA0 125 aaKnown RBP10.35□□□□□ -0.75
SKP2-201ENST00000274254 FLG2Q5D862 2391 aaPredicted RBP10.35□□□□□ -0.75
SKP2-201ENST00000274254 SLC25A20O43772 301 aa10.34□□□□□ -0.75
SKP2-201ENST00000274254 C9orf118A6NHY6 69 aa10.33□□□□□ -0.76
SKP2-201ENST00000274254 hADV29S1A0JD25 119 aa10.33□□□□□ -0.76
SKP2-201ENST00000274254 H3BUT2 72 aa10.32□□□□□ -0.76
SKP2-201ENST00000274254 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
SKP2-201ENST00000274254 CLEC2BQ92478 149 aa10.32□□□□□ -0.76
SKP2-201ENST00000274254 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
SKP2-201ENST00000274254 A0A1B0GX51 115 aa10.31□□□□□ -0.76
SKP2-201ENST00000274254 SCGB1C2P0DMR2 95 aa10.31□□□□□ -0.76
SKP2-201ENST00000274254 ST20-AS1Q8NBB2 130 aa10.31□□□□□ -0.76
SKP2-201ENST00000274254 ZNF706Q9Y5V0 76 aaPredicted RBP10.31□□□□□ -0.76
SKP2-201ENST00000274254 LINC00483Q53H64 154 aa10.28□□□□□ -0.76
SKP2-201ENST00000274254 SNCGO76070 127 aa10.27□□□□□ -0.77
SKP2-201ENST00000274254 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.27□□□□□ -0.77
SKP2-201ENST00000274254 Q6ZQY7 126 aa10.27□□□□□ -0.77
SKP2-201ENST00000274254 IGLV5-48A0A075B6I7 105 aa10.26□□□□□ -0.77
SKP2-201ENST00000274254 A0A1W2PPM0 123 aa10.26□□□□□ -0.77
SKP2-201ENST00000274254 LST1O00453 97 aa10.26□□□□□ -0.77
SKP2-201ENST00000274254 LINC01547P58512 204 aaPredicted RBP10.26□□□□□ -0.77
SKP2-201ENST00000274254 LYRM7Q5U5X0 104 aa10.26□□□□□ -0.77
SKP2-201ENST00000274254 GAGE2AQ6NT46 116 aa10.26□□□□□ -0.77
SKP2-201ENST00000274254 ANAPC11Q9NYG5 84 aa10.25□□□□□ -0.77
SKP2-201ENST00000274254 TCL1BO95988 128 aa10.24□□□□□ -0.77
SKP2-201ENST00000274254 SPRR1BP22528 89 aa10.24□□□□□ -0.77
SKP2-201ENST00000274254 ABCA13Q86UQ4 5058 aa10.24□□□□□ -0.77
SKP2-201ENST00000274254 TRACP01848 142 aa10.23□□□□□ -0.77
SKP2-201ENST00000274254 FAM229BQ4G0N7 80 aa10.23□□□□□ -0.77
SKP2-201ENST00000274254 TEX49A0A1B0GTD5 131 aa10.23□□□□□ -0.77
SKP2-201ENST00000274254 DEFB105AQ8NG35 78 aa10.23□□□□□ -0.77
SKP2-201ENST00000274254 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
SKP2-201ENST00000274254 TRBV20-1A0A075B6N2 111 aa10.22□□□□□ -0.77
SKP2-201ENST00000274254 FABP2P12104 132 aa10.22□□□□□ -0.77
SKP2-201ENST00000274254 Q8N377 158 aa10.22□□□□□ -0.77
SKP2-201ENST00000274254 MYCBP2O75592 4640 aa10.21□□□□□ -0.77
SKP2-201ENST00000274254 A0A087X002 238 aa10.21□□□□□ -0.78
SKP2-201ENST00000274254 DNAL4O96015 105 aa10.21□□□□□ -0.78
SKP2-201ENST00000274254 ATXN8Q156A1 80 aa10.21□□□□□ -0.78
SKP2-201ENST00000274254 OCIAD2Q56VL3 154 aa10.21□□□□□ -0.78
SKP2-201ENST00000274254 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
SKP2-201ENST00000274254 CRYGAP11844 174 aa10.19□□□□□ -0.78
SKP2-201ENST00000274254 OXTP01178 125 aa10.18□□□□□ -0.78
SKP2-201ENST00000274254 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
SKP2-201ENST00000274254 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
SKP2-201ENST00000274254 SMIM29Q86T20 159 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms