RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 KRTAP1-4P0C5Y4 121 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 SPATA45Q537H7 98 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 KRTAP13-1Q8IUC0 172 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 ARL17AQ8IVW1 177 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 PYY3Q5JQD4 70 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 MUSTN1Q8IVN3 82 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 LINC00337Q8N6G1 96 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
DEPDC1B-201ENST00000265036 ETDCA0A1B0GVM5 59 aa4.34□□□□□ -1.71
DEPDC1B-201ENST00000265036 PRYO14603 147 aa4.34□□□□□ -1.71
DEPDC1B-201ENST00000265036 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
DEPDC1B-201ENST00000265036 SPANXDQ9BXN6 97 aa4.34□□□□□ -1.71
DEPDC1B-201ENST00000265036 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.72
DEPDC1B-201ENST00000265036 A0A087X002 238 aa4.34□□□□□ -1.72
DEPDC1B-201ENST00000265036 NDUFC2O95298 119 aa4.34□□□□□ -1.72
DEPDC1B-201ENST00000265036 KCNQ1DNQ9H478 68 aa4.34□□□□□ -1.72
DEPDC1B-201ENST00000265036 TRBV10-2A0A0K0K1G8 114 aa4.33□□□□□ -1.72
DEPDC1B-201ENST00000265036 IGLV6-57P01721 117 aa4.33□□□□□ -1.72
DEPDC1B-201ENST00000265036 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
DEPDC1B-201ENST00000265036 COX8AP10176 69 aa4.33□□□□□ -1.72
DEPDC1B-201ENST00000265036 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-201ENST00000265036 PPDPFQ9H3Y8 114 aa4.32□□□□□ -1.72
DEPDC1B-201ENST00000265036 A6NDN8 102 aa4.32□□□□□ -1.72
DEPDC1B-201ENST00000265036 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
DEPDC1B-201ENST00000265036 SPRR1AP35321 89 aa4.32□□□□□ -1.72
DEPDC1B-201ENST00000265036 ERC2-IT1O76042 136 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 HIST1H4GQ99525 98 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 Q9BRP9 147 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 A4D1N5 150 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 B5MCH6 92 aa4.31□□□□□ -1.72
DEPDC1B-201ENST00000265036 IFITM1P13164 125 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 KRTAP10-8P60410 259 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 C6orf99Q4VX62 202 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 SLC25A34Q6PIV7 304 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 Q6ZRX8 168 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 LRP2P98164 4655 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 C2orf91Q6ZV80 131 aa4.3□□□□□ -1.72
DEPDC1B-201ENST00000265036 Q6ZVH6 145 aa4.29□□□□□ -1.72
DEPDC1B-201ENST00000265036 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
DEPDC1B-201ENST00000265036 GAGE2AQ6NT46 116 aa4.29□□□□□ -1.72
DEPDC1B-201ENST00000265036 C3orf22Q8N5N4 141 aa4.29□□□□□ -1.72
DEPDC1B-201ENST00000265036 COPS9Q8WXC6 57 aa4.29□□□□□ -1.72
DEPDC1B-201ENST00000265036 CRYGAP11844 174 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 ST20-AS1Q8NBB2 130 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 SPRR4Q96PI1 79 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 KRTAP3-3Q9BYR6 98 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 H7C2G1 150 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 PRO1933Q9H354 126 aa4.28□□□□□ -1.72
DEPDC1B-201ENST00000265036 DLEU1O43261 78 aa4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 TSPAN13O95857 204 aa4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 RPL13AP40429 203 aaKnown RBP4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 LPAP08519 4548 aa4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 HINT1P49773 126 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 SMIM11BQ8TCY0 68 aa4.27□□□□□ -1.73
DEPDC1B-201ENST00000265036 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
DEPDC1B-201ENST00000265036 IGLV9-49A0A0B4J1Y8 123 aa4.26□□□□□ -1.73
DEPDC1B-201ENST00000265036 TRAV13-2A0A0B4J235 113 aa4.26□□□□□ -1.73
DEPDC1B-201ENST00000265036 COX7BP24311 80 aa4.26□□□□□ -1.73
DEPDC1B-201ENST00000265036 ELOF1P60002 83 aaKnown RBP4.26□□□□□ -1.73
DEPDC1B-201ENST00000265036 FXYD2P54710 66 aa4.25□□□□□ -1.73
DEPDC1B-201ENST00000265036 HIGD1BQ9P298 99 aa4.25□□□□□ -1.73
DEPDC1B-201ENST00000265036 ZNF706Q9Y5V0 76 aaPredicted RBP4.24□□□□□ -1.73
DEPDC1B-201ENST00000265036 DEFB105AQ8NG35 78 aa4.24□□□□□ -1.73
DEPDC1B-201ENST00000265036 K7ERJ3 54 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 CFC1BP0CG36 223 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 CFC1P0CG37 223 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 MOBPQ13875 183 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 FAM229BQ4G0N7 80 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 CEND1Q8N111 149 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 RAB37Q96AX2 223 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 Q1RN00 199 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 RETNLBQ9BQ08 111 aa4.23□□□□□ -1.73
DEPDC1B-201ENST00000265036 C9orf153Q5TBE3 101 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 UQCR10Q9UDW1 63 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 A0A1B0GWB2 263 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 SNHG12Q9BXW3 62 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 DHRS4-AS1Q9P1J3 65 aa4.22□□□□□ -1.73
DEPDC1B-201ENST00000265036 TSTD3H0UI37 97 aa4.21□□□□□ -1.73
DEPDC1B-201ENST00000265036 LINC00483Q53H64 154 aa4.21□□□□□ -1.73
DEPDC1B-201ENST00000265036 Q8NBF4 154 aa4.21□□□□□ -1.73
DEPDC1B-201ENST00000265036 HSD52Q0P140 79 aa4.21□□□□□ -1.74
DEPDC1B-201ENST00000265036 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
DEPDC1B-201ENST00000265036 TAL2Q16559 108 aa4.2□□□□□ -1.74
DEPDC1B-201ENST00000265036 A0A0G2JQZ4 141 aa4.19□□□□□ -1.74
DEPDC1B-201ENST00000265036 PRR4Q16378 134 aa4.19□□□□□ -1.74
DEPDC1B-201ENST00000265036 XP32Q5T750 250 aa4.19□□□□□ -1.74
DEPDC1B-201ENST00000265036 Q6ZQY7 126 aa4.19□□□□□ -1.74
DEPDC1B-201ENST00000265036 TRBV7-6A0A0J9YX20 115 aa4.19□□□□□ -1.74
DEPDC1B-201ENST00000265036 SLC25A20O43772 301 aa4.18□□□□□ -1.74
DEPDC1B-201ENST00000265036 VAMP3Q15836 100 aa4.18□□□□□ -1.74
DEPDC1B-201ENST00000265036 HRCT1Q6UXD1 115 aa4.18□□□□□ -1.74
DEPDC1B-201ENST00000265036 PRO1854Q9UHT4 67 aa4.18□□□□□ -1.74
DEPDC1B-201ENST00000265036 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
DEPDC1B-201ENST00000265036 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 217 ms