RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 KRTAP10-2P60368 255 aa14.47□□□□□ -0.09
SMARCB1-201ENST00000263121 RPL37AP8A6NKH3 93 aa14.46□□□□□ -0.09
SMARCB1-201ENST00000263121 TRBV7-6A0A0J9YX20 115 aa14.46□□□□□ -0.1
SMARCB1-201ENST00000263121 C9JAW5 83 aa14.46□□□□□ -0.1
SMARCB1-201ENST00000263121 EPM2AB3EWF7 344 aa14.44□□□□□ -0.1
SMARCB1-201ENST00000263121 PRYO14603 147 aa14.44□□□□□ -0.1
SMARCB1-201ENST00000263121 SMCPP49901 116 aaPredicted RBP14.44□□□□□ -0.1
SMARCB1-201ENST00000263121 A0A1B0GX51 115 aa14.42□□□□□ -0.1
SMARCB1-201ENST00000263121 ELOF1P60002 83 aaKnown RBP14.42□□□□□ -0.1
SMARCB1-201ENST00000263121 SLC25A20O43772 301 aa14.41□□□□□ -0.1
SMARCB1-201ENST00000263121 COX7BP24311 80 aa14.41□□□□□ -0.1
SMARCB1-201ENST00000263121 SPRR1AP35321 89 aa14.41□□□□□ -0.1
SMARCB1-201ENST00000263121 LINC00575Q6W349 94 aa14.41□□□□□ -0.1
SMARCB1-201ENST00000263121 PHF5AQ7RTV0 110 aaKnown RBP14.39□□□□□ -0.11
SMARCB1-201ENST00000263121 DNAH5Q8TE73 4624 aa14.39□□□□□ -0.11
SMARCB1-201ENST00000263121 DPH3Q96FX2 82 aa14.39□□□□□ -0.11
SMARCB1-201ENST00000263121 RYR2Q92736 4967 aa14.39□□□□□ -0.11
SMARCB1-201ENST00000263121 PKD1P98161 4303 aa14.38□□□□□ -0.11
SMARCB1-201ENST00000263121 KRTAP4-16G5E9R7 235 aaPredicted RBP14.38□□□□□ -0.11
SMARCB1-201ENST00000263121 LINC00336Q6ZUF6 198 aa14.38□□□□□ -0.11
SMARCB1-201ENST00000263121 LINC01600Q96MT4 127 aa14.38□□□□□ -0.11
SMARCB1-201ENST00000263121 LINC00528Q8N1L1 170 aa14.36□□□□□ -0.11
SMARCB1-201ENST00000263121 H3BT86 120 aa14.36□□□□□ -0.11
SMARCB1-201ENST00000263121 DNAL4O96015 105 aa14.36□□□□□ -0.11
SMARCB1-201ENST00000263121 ANKRD29Q8N6D5 301 aa14.36□□□□□ -0.11
SMARCB1-201ENST00000263121 REG3GQ6UW15 175 aa14.35□□□□□ -0.11
SMARCB1-201ENST00000263121 PLAC8Q9NZF1 115 aa14.34□□□□□ -0.11
SMARCB1-201ENST00000263121 hADV29S1A0JD25 119 aa14.33□□□□□ -0.11
SMARCB1-201ENST00000263121 KRTAP11-1Q8IUC1 163 aa14.33□□□□□ -0.11
SMARCB1-201ENST00000263121 SNCGO76070 127 aa14.33□□□□□ -0.12
SMARCB1-201ENST00000263121 KMT2CQ8NEZ4 4911 aaKnown RBP14.32□□□□□ -0.12
SMARCB1-201ENST00000263121 B5MCH6 92 aa14.32□□□□□ -0.12
SMARCB1-201ENST00000263121 UBE2BP63146 152 aa14.32□□□□□ -0.12
SMARCB1-201ENST00000263121 ETDCA0A1B0GVM5 59 aa14.31□□□□□ -0.12
SMARCB1-201ENST00000263121 Q6ZRX8 168 aa14.3□□□□□ -0.12
SMARCB1-201ENST00000263121 BAALC-AS2P0C853 105 aa14.3□□□□□ -0.12
SMARCB1-201ENST00000263121 ETDBQ3ZM63 59 aa14.3□□□□□ -0.12
SMARCB1-201ENST00000263121 DNAH8Q96JB1 4490 aa14.28□□□□□ -0.12
SMARCB1-201ENST00000263121 KRTAP10-1P60331 282 aa14.28□□□□□ -0.12
SMARCB1-201ENST00000263121 INAFM2P0DMQ5 153 aa14.27□□□□□ -0.12
SMARCB1-201ENST00000263121 ORMDL1Q9P0S3 153 aa14.27□□□□□ -0.12
SMARCB1-201ENST00000263121 Q6ZSA8 131 aa14.26□□□□□ -0.13
SMARCB1-201ENST00000263121 FAM30AQ9NZY2 134 aa14.26□□□□□ -0.13
SMARCB1-201ENST00000263121 TEN1Q86WV5 123 aa14.26□□□□□ -0.13
SMARCB1-201ENST00000263121 Q9BRP9 147 aa14.25□□□□□ -0.13
SMARCB1-201ENST00000263121 A0A1B0GVY2 172 aa14.24□□□□□ -0.13
SMARCB1-201ENST00000263121 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-201ENST00000263121 Q6ZQY7 126 aa14.23□□□□□ -0.13
SMARCB1-201ENST00000263121 DHRS4-AS1Q9P1J3 65 aa14.23□□□□□ -0.13
SMARCB1-201ENST00000263121 FAM19A1Q7Z5A9 133 aa14.21□□□□□ -0.13
SMARCB1-201ENST00000263121 CIRBP-AS1Q8TBR5 109 aa14.19□□□□□ -0.14
SMARCB1-201ENST00000263121 TMEM256-PLSCR3K7ERE1 68 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 BCE1O60756 84 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 PRLHP81277 87 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 OCIAD2Q56VL3 154 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 H0Y9J4 135 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 SCXQ7RTU7 201 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 SMCR5Q8TEV8 140 aa14.17□□□□□ -0.14
SMARCB1-201ENST00000263121 H3BQ85 93 aa14.15□□□□□ -0.14
SMARCB1-201ENST00000263121 PPDPFLQ8WWR9 84 aa14.15□□□□□ -0.14
SMARCB1-201ENST00000263121 TEX49A0A1B0GTD5 131 aa14.14□□□□□ -0.15
SMARCB1-201ENST00000263121 ERC2-IT1O76042 136 aa14.14□□□□□ -0.15
SMARCB1-201ENST00000263121 KRTAP13-1Q8IUC0 172 aa14.13□□□□□ -0.15
SMARCB1-201ENST00000263121 PSORS1C2Q9UIG4 136 aa14.13□□□□□ -0.15
SMARCB1-201ENST00000263121 GHRHP01286 108 aa14.12□□□□□ -0.15
SMARCB1-201ENST00000263121 UBE2AP49459 152 aa14.1□□□□□ -0.15
SMARCB1-201ENST00000263121 LINC01547P58512 204 aaPredicted RBP14.1□□□□□ -0.15
SMARCB1-201ENST00000263121 OBSCN-AS1Q96MR7 158 aa14.1□□□□□ -0.15
SMARCB1-201ENST00000263121 PKHD1P08F94 4074 aa14.1□□□□□ -0.15
SMARCB1-201ENST00000263121 ST20-AS1Q8NBB2 130 aa14.08□□□□□ -0.16
SMARCB1-201ENST00000263121 HIGD2AQ9BW72 106 aa14.08□□□□□ -0.16
SMARCB1-201ENST00000263121 IGLV5-48A0A075B6I7 105 aa14.07□□□□□ -0.16
SMARCB1-201ENST00000263121 HAMPP81172 84 aa14.07□□□□□ -0.16
SMARCB1-201ENST00000263121 K7ERU9 68 aa14.06□□□□□ -0.16
SMARCB1-201ENST00000263121 Q8N377 158 aa14.06□□□□□ -0.16
SMARCB1-201ENST00000263121 LRP1BQ9NZR2 4599 aa14.06□□□□□ -0.16
SMARCB1-201ENST00000263121 RYR3Q15413 4870 aa14.05□□□□□ -0.16
SMARCB1-201ENST00000263121 C1orf137Q5JT78 98 aa14.04□□□□□ -0.16
SMARCB1-201ENST00000263121 DEFB105AQ8NG35 78 aa14.04□□□□□ -0.16
SMARCB1-201ENST00000263121 DYNC1H1Q14204 4646 aaKnown RBP14.04□□□□□ -0.16
SMARCB1-201ENST00000263121 JMJD7-PLA2G4BH0Y9G9 81 aa14.03□□□□□ -0.16
SMARCB1-201ENST00000263121 J3QR89 54 aa14.02□□□□□ -0.16
SMARCB1-201ENST00000263121 LAMTOR3Q9UHA4 124 aa14.02□□□□□ -0.16
SMARCB1-201ENST00000263121 NDUFV3P56181 108 aaKnown RBP14.01□□□□□ -0.17
SMARCB1-201ENST00000263121 A0A1B0GV72 72 aa13.99□□□□□ -0.17
SMARCB1-201ENST00000263121 C14orf132Q9NPU4 83 aa13.99□□□□□ -0.17
SMARCB1-201ENST00000263121 ZNF861PO60384 105 aa13.97□□□□□ -0.17
SMARCB1-201ENST00000263121 IGLV7-43P04211 117 aa13.96□□□□□ -0.17
SMARCB1-201ENST00000263121 RBM3P98179 157 aaKnown RBP13.95□□□□□ -0.18
SMARCB1-201ENST00000263121 XGP55808 180 aa13.94□□□□□ -0.18
SMARCB1-201ENST00000263121 SPRR1BP22528 89 aa13.93□□□□□ -0.18
SMARCB1-201ENST00000263121 C3orf22Q8N5N4 141 aa13.93□□□□□ -0.18
SMARCB1-201ENST00000263121 SMIM29Q86T20 159 aa13.92□□□□□ -0.18
SMARCB1-201ENST00000263121 LOC110117498A0A087WWA1 95 aa13.89□□□□□ -0.19
SMARCB1-201ENST00000263121 TRBV7-4A0A0J9YYF1 115 aa13.88□□□□□ -0.19
SMARCB1-201ENST00000263121 GAGE2AQ6NT46 116 aa13.88□□□□□ -0.19
SMARCB1-201ENST00000263121 APOBP04114 4563 aaKnown RBP13.88□□□□□ -0.19
SMARCB1-201ENST00000263121 SPRR4Q96PI1 79 aa13.88□□□□□ -0.19
SMARCB1-201ENST00000263121 DSCR8Q96T75 97 aa13.88□□□□□ -0.19
SMARCB1-201ENST00000263121 Q6ZQT0 140 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms