RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 Q6ZTC4 211 aa11.47□□□□□ -0.57
TRAM1-201ENST00000262213 TMEM254Q8TBM7 123 aa11.46□□□□□ -0.57
TRAM1-201ENST00000262213 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
TRAM1-201ENST00000262213 IGKV4-1P06312 121 aa11.46□□□□□ -0.58
TRAM1-201ENST00000262213 NKAPP1Q8N9T2 125 aa11.45□□□□□ -0.58
TRAM1-201ENST00000262213 NSD1Q96L73 2696 aaPredicted RBP11.45□□□□□ -0.58
TRAM1-201ENST00000262213 ESRGQ1W209 222 aa11.45□□□□□ -0.58
TRAM1-201ENST00000262213 SERTAD4-AS1Q5TG53 156 aa11.44□□□□□ -0.58
TRAM1-201ENST00000262213 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
TRAM1-201ENST00000262213 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
TRAM1-201ENST00000262213 EPM2AB3EWF7 344 aa11.43□□□□□ -0.58
TRAM1-201ENST00000262213 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
TRAM1-201ENST00000262213 FP248Q71RG6 208 aaPredicted RBP11.42□□□□□ -0.58
TRAM1-201ENST00000262213 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
TRAM1-201ENST00000262213 TENM3Q9P273 2699 aa11.41□□□□□ -0.58
TRAM1-201ENST00000262213 Q8N377 158 aa11.41□□□□□ -0.58
TRAM1-201ENST00000262213 F8P00451 2351 aa11.4□□□□□ -0.58
TRAM1-201ENST00000262213 LINC00336Q6ZUF6 198 aa11.39□□□□□ -0.59
TRAM1-201ENST00000262213 NDUFC1O43677 76 aa11.39□□□□□ -0.59
TRAM1-201ENST00000262213 OXLD1Q5BKU9 147 aa11.39□□□□□ -0.59
TRAM1-201ENST00000262213 SMIM26A0A096LP01 95 aa11.39□□□□□ -0.59
TRAM1-201ENST00000262213 WIPF1O43516 503 aa11.38□□□□□ -0.59
TRAM1-201ENST00000262213 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
TRAM1-201ENST00000262213 HIGD2AQ9BW72 106 aa11.37□□□□□ -0.59
TRAM1-201ENST00000262213 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
TRAM1-201ENST00000262213 OCR1Q9BZK8 76 aa11.36□□□□□ -0.59
TRAM1-201ENST00000262213 ST20-AS1Q8NBB2 130 aa11.36□□□□□ -0.59
TRAM1-201ENST00000262213 KCNQ1DNQ9H478 68 aa11.36□□□□□ -0.59
TRAM1-201ENST00000262213 PRYO14603 147 aa11.35□□□□□ -0.59
TRAM1-201ENST00000262213 SMIM29Q86T20 159 aa11.34□□□□□ -0.59
TRAM1-201ENST00000262213 FUSP35637 526 aaKnown RBP eCLIP11.33□□□□□ -0.59
TRAM1-201ENST00000262213 FAM229BQ4G0N7 80 aa11.33□□□□□ -0.59
TRAM1-201ENST00000262213 MPLKIPQ8TAP9 179 aa11.33□□□□□ -0.59
TRAM1-201ENST00000262213 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
TRAM1-201ENST00000262213 A0A1W2PNM2 257 aa11.32□□□□□ -0.6
TRAM1-201ENST00000262213 Q9BRP9 147 aa11.32□□□□□ -0.6
TRAM1-201ENST00000262213 BAHCC1Q9P281 2608 aa11.31□□□□□ -0.6
TRAM1-201ENST00000262213 DEFB131BA0A096LNP1 70 aa11.31□□□□□ -0.6
TRAM1-201ENST00000262213 ETDCA0A1B0GVM5 59 aa11.31□□□□□ -0.6
TRAM1-201ENST00000262213 C1orf137Q5JT78 98 aa11.3□□□□□ -0.6
TRAM1-201ENST00000262213 H3BNG1 76 aa11.3□□□□□ -0.6
TRAM1-201ENST00000262213 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
TRAM1-201ENST00000262213 CASC10Q5T4H9 136 aa11.3□□□□□ -0.6
TRAM1-201ENST00000262213 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
TRAM1-201ENST00000262213 ERC2-IT1O76042 136 aa11.29□□□□□ -0.6
TRAM1-201ENST00000262213 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
TRAM1-201ENST00000262213 Q6ZRX8 168 aa11.29□□□□□ -0.6
TRAM1-201ENST00000262213 ATP5EP56381 51 aaPredicted RBP11.29□□□□□ -0.6
TRAM1-201ENST00000262213 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
TRAM1-201ENST00000262213 A0A0G2JQZ4 141 aa11.27□□□□□ -0.61
TRAM1-201ENST00000262213 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
TRAM1-201ENST00000262213 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.61
TRAM1-201ENST00000262213 UBE2BP63146 152 aa11.25□□□□□ -0.61
TRAM1-201ENST00000262213 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
TRAM1-201ENST00000262213 PRO0628Q9UI54 55 aa11.24□□□□□ -0.61
TRAM1-201ENST00000262213 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
TRAM1-201ENST00000262213 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
TRAM1-201ENST00000262213 BRK1Q8WUW1 75 aa11.23□□□□□ -0.61
TRAM1-201ENST00000262213 Q8NBF4 154 aa11.22□□□□□ -0.61
TRAM1-201ENST00000262213 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
TRAM1-201ENST00000262213 KRTAP4-16G5E9R7 235 aaPredicted RBP11.22□□□□□ -0.61
TRAM1-201ENST00000262213 K7EQZ3 153 aa11.22□□□□□ -0.61
TRAM1-201ENST00000262213 KRTAP7-1Q8IUC3 87 aa11.22□□□□□ -0.61
TRAM1-201ENST00000262213 NOTCH1P46531 2555 aa11.21□□□□□ -0.61
TRAM1-201ENST00000262213 DEFB116Q30KQ4 102 aa11.21□□□□□ -0.61
TRAM1-201ENST00000262213 MAST4O15021 2626 aa11.21□□□□□ -0.62
TRAM1-201ENST00000262213 STAB1Q9NY15 2570 aa11.2□□□□□ -0.62
TRAM1-201ENST00000262213 TNP2Q05952 138 aa11.2□□□□□ -0.62
TRAM1-201ENST00000262213 PKIGQ9Y2B9 76 aa11.2□□□□□ -0.62
TRAM1-201ENST00000262213 F8WDY8 70 aa11.19□□□□□ -0.62
TRAM1-201ENST00000262213 DSCR10P59022 87 aa11.19□□□□□ -0.62
TRAM1-201ENST00000262213 MRPL55Q7Z7F7 128 aaKnown RBP11.17□□□□□ -0.62
TRAM1-201ENST00000262213 DNAH10OSP0CZ25 163 aa11.17□□□□□ -0.62
TRAM1-201ENST00000262213 PRR4Q16378 134 aa11.17□□□□□ -0.62
TRAM1-201ENST00000262213 ANK2Q01484 3957 aa11.16□□□□□ -0.62
TRAM1-201ENST00000262213 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
TRAM1-201ENST00000262213 SPRR1AP35321 89 aa11.16□□□□□ -0.62
TRAM1-201ENST00000262213 PRB2P02812 416 aaPredicted RBP11.15□□□□□ -0.62
TRAM1-201ENST00000262213 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
TRAM1-201ENST00000262213 PLA2G2DQ9UNK4 145 aa11.15□□□□□ -0.63
TRAM1-201ENST00000262213 LINC00476Q8WZB0 136 aa11.14□□□□□ -0.63
TRAM1-201ENST00000262213 SPRR4Q96PI1 79 aa11.13□□□□□ -0.63
TRAM1-201ENST00000262213 PRLHP81277 87 aa11.11□□□□□ -0.63
TRAM1-201ENST00000262213 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
TRAM1-201ENST00000262213 WFDC13Q8IUB5 93 aa11.11□□□□□ -0.63
TRAM1-201ENST00000262213 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
TRAM1-201ENST00000262213 IGKV2-24A0A0C4DH68 120 aa11.11□□□□□ -0.63
TRAM1-201ENST00000262213 PSCAO43653 123 aa11.1□□□□□ -0.63
TRAM1-201ENST00000262213 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.1□□□□□ -0.63
TRAM1-201ENST00000262213 A0A1B0GW54 56 aa11.1□□□□□ -0.63
TRAM1-201ENST00000262213 HCG22E2RYF7 251 aa11.09□□□□□ -0.63
TRAM1-201ENST00000262213 FBN1P35555 2871 aaKnown RBP11.08□□□□□ -0.64
TRAM1-201ENST00000262213 C1orf64Q8NEQ6 169 aa11.08□□□□□ -0.64
TRAM1-201ENST00000262213 IGFL1Q6UW32 110 aa11.07□□□□□ -0.64
TRAM1-201ENST00000262213 hDV103S1A0JD37 113 aa11.07□□□□□ -0.64
TRAM1-201ENST00000262213 RPL37AP61513 92 aaKnown RBP11.07□□□□□ -0.64
TRAM1-201ENST00000262213 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
TRAM1-201ENST00000262213 A0A087WSZ3 146 aa11.06□□□□□ -0.64
TRAM1-201ENST00000262213 LCE6AA0A183 80 aa11.06□□□□□ -0.64
TRAM1-201ENST00000262213 ZCCHC13Q8WW36 166 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms