RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 NKAPP1Q8N9T2 125 aa9.95□□□□□ -0.82
DDX56-201ENST00000258772 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
DDX56-201ENST00000258772 C7orf33Q8WU49 177 aa9.94□□□□□ -0.82
DDX56-201ENST00000258772 CMYA5Q8N3K9 4069 aa9.93□□□□□ -0.82
DDX56-201ENST00000258772 F8P00451 2351 aa9.93□□□□□ -0.82
DDX56-201ENST00000258772 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
DDX56-201ENST00000258772 TLX1NBP0CAT3 122 aa9.91□□□□□ -0.82
DDX56-201ENST00000258772 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
DDX56-201ENST00000258772 FAM19A5Q7Z5A7 132 aaPredicted RBP9.91□□□□□ -0.82
DDX56-201ENST00000258772 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
DDX56-201ENST00000258772 Q8N377 158 aa9.89□□□□□ -0.83
DDX56-201ENST00000258772 PLA2G2DQ9UNK4 145 aa9.89□□□□□ -0.83
DDX56-201ENST00000258772 DEFB105AQ8NG35 78 aa9.89□□□□□ -0.83
DDX56-201ENST00000258772 V9GYY9 64 aa9.89□□□□□ -0.83
DDX56-201ENST00000258772 LINC00588Q9Y4M8 146 aa9.88□□□□□ -0.83
DDX56-201ENST00000258772 FLNBO75369 2602 aaKnown RBP9.87□□□□□ -0.83
DDX56-201ENST00000258772 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
DDX56-201ENST00000258772 FAM168BA1KXE4 195 aa9.86□□□□□ -0.83
DDX56-201ENST00000258772 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
DDX56-201ENST00000258772 NREPQ16612 68 aa9.86□□□□□ -0.83
DDX56-201ENST00000258772 DNAH3Q8TD57 4116 aa9.86□□□□□ -0.83
DDX56-201ENST00000258772 IGLV5-48A0A075B6I7 105 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 OXTP01178 125 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 KLKP1Q107X0 134 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 Q6ZRX8 168 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 KRTAP4-16G5E9R7 235 aaPredicted RBP9.85□□□□□ -0.83
DDX56-201ENST00000258772 H7BZZ5 65 aa9.85□□□□□ -0.83
DDX56-201ENST00000258772 IGLV5-37A0A075B6J1 123 aa9.84□□□□□ -0.83
DDX56-201ENST00000258772 TM2D3Q9BRN9 247 aa9.84□□□□□ -0.83
DDX56-201ENST00000258772 Q9BRP9 147 aa9.84□□□□□ -0.83
DDX56-201ENST00000258772 C3orf84H3BNL1 204 aa9.83□□□□□ -0.84
DDX56-201ENST00000258772 PRYO14603 147 aa9.83□□□□□ -0.84
DDX56-201ENST00000258772 SPRR1AP35321 89 aa9.83□□□□□ -0.84
DDX56-201ENST00000258772 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
DDX56-201ENST00000258772 Q8N9L7 120 aa9.83□□□□□ -0.84
DDX56-201ENST00000258772 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
DDX56-201ENST00000258772 FBN1P35555 2871 aaKnown RBP9.82□□□□□ -0.84
DDX56-201ENST00000258772 IGKV4-1P06312 121 aa9.82□□□□□ -0.84
DDX56-201ENST00000258772 NOTCH1P46531 2555 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 MAST4O15021 2626 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 FAM236DA0A1B0GTK5 79 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 ETDCA0A1B0GVM5 59 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 FAM236CP0DP71 79 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 BPY2O14599 106 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 RMI2Q96E14 147 aa9.81□□□□□ -0.84
DDX56-201ENST00000258772 PRB2P02812 416 aaPredicted RBP9.78□□□□□ -0.84
DDX56-201ENST00000258772 FUSP35637 526 aaKnown RBP eCLIP9.78□□□□□ -0.84
DDX56-201ENST00000258772 TNP2Q05952 138 aa9.78□□□□□ -0.84
DDX56-201ENST00000258772 ST20-AS1Q8NBB2 130 aa9.78□□□□□ -0.84
DDX56-201ENST00000258772 DNAH1Q9P2D7 4330 aa9.78□□□□□ -0.84
DDX56-201ENST00000258772 A0A1W2PNM2 257 aa9.77□□□□□ -0.85
DDX56-201ENST00000258772 MRPL55Q7Z7F7 128 aaKnown RBP9.77□□□□□ -0.85
DDX56-201ENST00000258772 A0A1B0GW54 56 aa9.77□□□□□ -0.85
DDX56-201ENST00000258772 C1orf137Q5JT78 98 aa9.76□□□□□ -0.85
DDX56-201ENST00000258772 F8WEM9 126 aa9.75□□□□□ -0.85
DDX56-201ENST00000258772 ERC2-IT1O76042 136 aa9.75□□□□□ -0.85
DDX56-201ENST00000258772 NDUFC1O43677 76 aa9.73□□□□□ -0.85
DDX56-201ENST00000258772 OCR1Q9BZK8 76 aa9.73□□□□□ -0.85
DDX56-201ENST00000258772 UBE2BP63146 152 aa9.72□□□□□ -0.85
DDX56-201ENST00000258772 Q8NBF4 154 aa9.72□□□□□ -0.85
DDX56-201ENST00000258772 TMEM254Q8TBM7 123 aa9.72□□□□□ -0.85
DDX56-201ENST00000258772 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
DDX56-201ENST00000258772 EPM2AB3EWF7 344 aa9.72□□□□□ -0.85
DDX56-201ENST00000258772 REG3GQ6UW15 175 aa9.71□□□□□ -0.85
DDX56-201ENST00000258772 Q5XG85 94 aa9.71□□□□□ -0.86
DDX56-201ENST00000258772 LINC00336Q6ZUF6 198 aa9.71□□□□□ -0.86
DDX56-201ENST00000258772 SPRR4Q96PI1 79 aa9.71□□□□□ -0.86
DDX56-201ENST00000258772 HUWE1Q7Z6Z7 4374 aaKnown RBP9.7□□□□□ -0.86
DDX56-201ENST00000258772 K7EIL1 84 aa9.7□□□□□ -0.86
DDX56-201ENST00000258772 NBEAL1Q6ZS30 2694 aa9.68□□□□□ -0.86
DDX56-201ENST00000258772 C4orf26Q17RF5 130 aa9.68□□□□□ -0.86
DDX56-201ENST00000258772 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
DDX56-201ENST00000258772 PRO0628Q9UI54 55 aa9.68□□□□□ -0.86
DDX56-201ENST00000258772 COL6A5A8TX70 2615 aa9.66□□□□□ -0.86
DDX56-201ENST00000258772 A0A096LNI7 61 aa9.65□□□□□ -0.87
DDX56-201ENST00000258772 A0A0U1RQV1 116 aa9.65□□□□□ -0.87
DDX56-201ENST00000258772 KRTAP1-5Q9BYS1 174 aa9.65□□□□□ -0.87
DDX56-201ENST00000258772 BAHCC1Q9P281 2608 aa9.64□□□□□ -0.87
DDX56-201ENST00000258772 C16orf90A8MZG2 172 aa9.64□□□□□ -0.87
DDX56-201ENST00000258772 DSCR10P59022 87 aa9.64□□□□□ -0.87
DDX56-201ENST00000258772 IGKV2-24A0A0C4DH68 120 aa9.63□□□□□ -0.87
DDX56-201ENST00000258772 LINC00476Q8WZB0 136 aa9.63□□□□□ -0.87
DDX56-201ENST00000258772 A0A1W2PNN7 141 aa9.62□□□□□ -0.87
DDX56-201ENST00000258772 ATP5EP56381 51 aaPredicted RBP9.62□□□□□ -0.87
DDX56-201ENST00000258772 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
DDX56-201ENST00000258772 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
DDX56-201ENST00000258772 FAM30AQ9NZY2 134 aa9.61□□□□□ -0.87
DDX56-201ENST00000258772 PRLHP81277 87 aa9.6□□□□□ -0.87
DDX56-201ENST00000258772 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
DDX56-201ENST00000258772 A0A0G2JQZ4 141 aa9.6□□□□□ -0.87
DDX56-201ENST00000258772 K7EQZ3 153 aa9.59□□□□□ -0.87
DDX56-201ENST00000258772 PSCAO43653 123 aa9.59□□□□□ -0.87
DDX56-201ENST00000258772 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
DDX56-201ENST00000258772 DNAH10Q8IVF4 4471 aa9.59□□□□□ -0.87
DDX56-201ENST00000258772 LYSTQ99698 3801 aa9.58□□□□□ -0.88
DDX56-201ENST00000258772 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
DDX56-201ENST00000258772 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
DDX56-201ENST00000258772 LCE6AA0A183 80 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms