RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 Q6ZRP5 223 aa11.15□□□□□ -0.62
CDK4-201ENST00000257904 MAST4O15021 2626 aa11.15□□□□□ -0.62
CDK4-201ENST00000257904 F8WEM9 126 aa11.15□□□□□ -0.63
CDK4-201ENST00000257904 HRCT1Q6UXD1 115 aa11.15□□□□□ -0.63
CDK4-201ENST00000257904 CMYA5Q8N3K9 4069 aa11.14□□□□□ -0.63
CDK4-201ENST00000257904 KRTAP10-11P60412 298 aa11.14□□□□□ -0.63
CDK4-201ENST00000257904 NREPQ16612 68 aa11.13□□□□□ -0.63
CDK4-201ENST00000257904 BPY2O14599 106 aa11.12□□□□□ -0.63
CDK4-201ENST00000257904 NDUFC1O43677 76 aa11.12□□□□□ -0.63
CDK4-201ENST00000257904 C1orf43Q9BWL3 253 aa11.12□□□□□ -0.63
CDK4-201ENST00000257904 Q8N9L7 120 aa11.11□□□□□ -0.63
CDK4-201ENST00000257904 IGKV4-1P06312 121 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 ESRGQ1W209 222 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 Q6ZTC4 211 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 KCNQ1DNQ9H478 68 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 RETNQ9HD89 108 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
CDK4-201ENST00000257904 F8WDY8 70 aa11.09□□□□□ -0.63
CDK4-201ENST00000257904 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
CDK4-201ENST00000257904 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
CDK4-201ENST00000257904 SYCNQ0VAF6 134 aa11.08□□□□□ -0.64
CDK4-201ENST00000257904 IGKV2D-24A0A075B6R9 120 aa11.07□□□□□ -0.64
CDK4-201ENST00000257904 NKAPP1Q8N9T2 125 aa11.07□□□□□ -0.64
CDK4-201ENST00000257904 TMEM254Q8TBM7 123 aa11.07□□□□□ -0.64
CDK4-201ENST00000257904 Q8N377 158 aa11.07□□□□□ -0.64
CDK4-201ENST00000257904 C3orf84H3BNL1 204 aa11.06□□□□□ -0.64
CDK4-201ENST00000257904 LINC01556Q5JQF7 62 aa11.06□□□□□ -0.64
CDK4-201ENST00000257904 SERTAD4-AS1Q5TG53 156 aa11.06□□□□□ -0.64
CDK4-201ENST00000257904 DEFB105AQ8NG35 78 aa11.05□□□□□ -0.64
CDK4-201ENST00000257904 C7orf33Q8WU49 177 aa11.05□□□□□ -0.64
CDK4-201ENST00000257904 IGLV5-48A0A075B6I7 105 aa11.05□□□□□ -0.64
CDK4-201ENST00000257904 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
CDK4-201ENST00000257904 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
CDK4-201ENST00000257904 SMIM26A0A096LP01 95 aa11.02□□□□□ -0.65
CDK4-201ENST00000257904 DNAH3Q8TD57 4116 aa11.01□□□□□ -0.65
CDK4-201ENST00000257904 ANK2Q01484 3957 aa11□□□□□ -0.65
CDK4-201ENST00000257904 FP248Q71RG6 208 aaPredicted RBP11□□□□□ -0.65
CDK4-201ENST00000257904 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
CDK4-201ENST00000257904 Q6ZRX8 168 aa10.99□□□□□ -0.65
CDK4-201ENST00000257904 A0A0U1RQV1 116 aa10.99□□□□□ -0.65
CDK4-201ENST00000257904 TLX1NBP0CAT3 122 aa10.99□□□□□ -0.65
CDK4-201ENST00000257904 PLA2G2DQ9UNK4 145 aa10.99□□□□□ -0.65
CDK4-201ENST00000257904 A0A1B0GW54 56 aa10.98□□□□□ -0.65
CDK4-201ENST00000257904 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDK4-201ENST00000257904 KRTAP4-16G5E9R7 235 aaPredicted RBP10.97□□□□□ -0.65
CDK4-201ENST00000257904 Q9BRP9 147 aa10.97□□□□□ -0.65
CDK4-201ENST00000257904 DEFB131BA0A096LNP1 70 aa10.97□□□□□ -0.65
CDK4-201ENST00000257904 PRYO14603 147 aa10.97□□□□□ -0.65
CDK4-201ENST00000257904 A0A1W2PNM2 257 aa10.96□□□□□ -0.65
CDK4-201ENST00000257904 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
CDK4-201ENST00000257904 TNP2Q05952 138 aa10.96□□□□□ -0.66
CDK4-201ENST00000257904 DNAH10OSP0CZ25 163 aa10.95□□□□□ -0.66
CDK4-201ENST00000257904 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
CDK4-201ENST00000257904 FAM168BA1KXE4 195 aa10.94□□□□□ -0.66
CDK4-201ENST00000257904 SPRR1AP35321 89 aa10.94□□□□□ -0.66
CDK4-201ENST00000257904 IGLV5-37A0A075B6J1 123 aa10.94□□□□□ -0.66
CDK4-201ENST00000257904 ETDCA0A1B0GVM5 59 aa10.93□□□□□ -0.66
CDK4-201ENST00000257904 C1orf137Q5JT78 98 aa10.93□□□□□ -0.66
CDK4-201ENST00000257904 ST20-AS1Q8NBB2 130 aa10.93□□□□□ -0.66
CDK4-201ENST00000257904 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
CDK4-201ENST00000257904 Q8NBF4 154 aa10.92□□□□□ -0.66
CDK4-201ENST00000257904 C11orf45Q8TAV5 145 aa10.92□□□□□ -0.66
CDK4-201ENST00000257904 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
CDK4-201ENST00000257904 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
CDK4-201ENST00000257904 PRB2P02812 416 aaPredicted RBP10.91□□□□□ -0.66
CDK4-201ENST00000257904 HIGD2AQ9BW72 106 aa10.91□□□□□ -0.66
CDK4-201ENST00000257904 LINC00336Q6ZUF6 198 aa10.91□□□□□ -0.66
CDK4-201ENST00000257904 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
CDK4-201ENST00000257904 MRAPQ8TCY5 172 aa10.91□□□□□ -0.66
CDK4-201ENST00000257904 MDFIQ99750 246 aa10.89□□□□□ -0.67
CDK4-201ENST00000257904 SPRR4Q96PI1 79 aa10.89□□□□□ -0.67
CDK4-201ENST00000257904 FAM30AQ9NZY2 134 aa10.88□□□□□ -0.67
CDK4-201ENST00000257904 CASC10Q5T4H9 136 aa10.88□□□□□ -0.67
CDK4-201ENST00000257904 NBEAL1Q6ZS30 2694 aa10.87□□□□□ -0.67
CDK4-201ENST00000257904 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
CDK4-201ENST00000257904 LCE6AA0A183 80 aa10.86□□□□□ -0.67
CDK4-201ENST00000257904 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
CDK4-201ENST00000257904 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
CDK4-201ENST00000257904 PRO0628Q9UI54 55 aa10.86□□□□□ -0.67
CDK4-201ENST00000257904 DSCR10P59022 87 aa10.85□□□□□ -0.67
CDK4-201ENST00000257904 DNAH1Q9P2D7 4330 aa10.85□□□□□ -0.67
CDK4-201ENST00000257904 LINC00588Q9Y4M8 146 aa10.83□□□□□ -0.68
CDK4-201ENST00000257904 UBE2BP63146 152 aa10.83□□□□□ -0.68
CDK4-201ENST00000257904 MGAM2Q2M2H8 2515 aa10.83□□□□□ -0.68
CDK4-201ENST00000257904 K7EIL1 84 aa10.82□□□□□ -0.68
CDK4-201ENST00000257904 K7EQZ3 153 aa10.81□□□□□ -0.68
CDK4-201ENST00000257904 REG3GQ6UW15 175 aa10.8□□□□□ -0.68
CDK4-201ENST00000257904 LINC00476Q8WZB0 136 aa10.78□□□□□ -0.68
CDK4-201ENST00000257904 ZCCHC13Q8WW36 166 aaKnown RBP10.77□□□□□ -0.69
CDK4-201ENST00000257904 MPLKIPQ8TAP9 179 aa10.77□□□□□ -0.69
CDK4-201ENST00000257904 HCG22E2RYF7 251 aa10.74□□□□□ -0.69
CDK4-201ENST00000257904 PSCAO43653 123 aa10.73□□□□□ -0.69
CDK4-201ENST00000257904 IGFL1Q6UW32 110 aa10.73□□□□□ -0.69
CDK4-201ENST00000257904 HUWE1Q7Z6Z7 4374 aaKnown RBP10.72□□□□□ -0.69
CDK4-201ENST00000257904 A0A0G2JQZ4 141 aa10.72□□□□□ -0.69
CDK4-201ENST00000257904 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
CDK4-201ENST00000257904 hDV103S1A0JD37 113 aa10.72□□□□□ -0.69
CDK4-201ENST00000257904 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.71□□□□□ -0.69
CDK4-201ENST00000257904 BRK1Q8WUW1 75 aa10.69□□□□□ -0.7
CDK4-201ENST00000257904 PRLHP81277 87 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms