RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 UBR4Q5T4S7 5183 aa14.77□□□□□ -0.05
LSM7-201ENST00000252622 TRAV23DV6A0A075B6W5 121 aa14.76□□□□□ -0.05
LSM7-201ENST00000252622 PCP2Q8IVA1 136 aa14.76□□□□□ -0.05
LSM7-201ENST00000252622 SPRR4Q96PI1 79 aa14.76□□□□□ -0.05
LSM7-201ENST00000252622 SMCR5Q8TEV8 140 aa14.75□□□□□ -0.05
LSM7-201ENST00000252622 CBY1Q9Y3M2 126 aa14.74□□□□□ -0.05
LSM7-201ENST00000252622 C5orf52A6NGY3 159 aa14.73□□□□□ -0.05
LSM7-201ENST00000252622 Q6ZRX8 168 aa14.72□□□□□ -0.05
LSM7-201ENST00000252622 PPDPFQ9H3Y8 114 aa14.72□□□□□ -0.05
LSM7-201ENST00000252622 LRP2P98164 4655 aa14.71□□□□□ -0.05
LSM7-201ENST00000252622 ZNF73O43830 326 aaPredicted RBP14.71□□□□□ -0.05
LSM7-201ENST00000252622 Q6ZVH6 145 aa14.71□□□□□ -0.05
LSM7-201ENST00000252622 COPS9Q8WXC6 57 aa14.71□□□□□ -0.05
LSM7-201ENST00000252622 HSBP1L1C9JCN9 74 aa14.7□□□□□ -0.06
LSM7-201ENST00000252622 IFITM1P13164 125 aa14.7□□□□□ -0.06
LSM7-201ENST00000252622 LINC00518Q8N0U6 118 aa14.7□□□□□ -0.06
LSM7-201ENST00000252622 OR13C6PQ8NH95 151 aa14.68□□□□□ -0.06
LSM7-201ENST00000252622 Q9BRP9 147 aa14.68□□□□□ -0.06
LSM7-201ENST00000252622 JOSD1Q15040 202 aaPredicted RBP14.66□□□□□ -0.06
LSM7-201ENST00000252622 ERC2-IT1O76042 136 aa14.64□□□□□ -0.07
LSM7-201ENST00000252622 LINC00483Q53H64 154 aa14.64□□□□□ -0.07
LSM7-201ENST00000252622 C3orf22Q8N5N4 141 aa14.64□□□□□ -0.07
LSM7-201ENST00000252622 LINC00304Q8N9R0 145 aa14.64□□□□□ -0.07
LSM7-201ENST00000252622 SCGB1D1O95968 90 aa14.63□□□□□ -0.07
LSM7-201ENST00000252622 HINT1P49773 126 aaPredicted RBP14.63□□□□□ -0.07
LSM7-201ENST00000252622 TSPAN13O95857 204 aa14.62□□□□□ -0.07
LSM7-201ENST00000252622 MUSTN1Q8IVN3 82 aa14.61□□□□□ -0.07
LSM7-201ENST00000252622 GAGE2AQ6NT46 116 aa14.58□□□□□ -0.08
LSM7-201ENST00000252622 CTAG1AP78358 180 aa14.57□□□□□ -0.08
LSM7-201ENST00000252622 PRR4Q16378 134 aa14.53□□□□□ -0.08
LSM7-201ENST00000252622 C6orf99Q4VX62 202 aa14.53□□□□□ -0.08
LSM7-201ENST00000252622 DHRS4-AS1Q9P1J3 65 aa14.53□□□□□ -0.08
LSM7-201ENST00000252622 ELOF1P60002 83 aaKnown RBP14.52□□□□□ -0.09
LSM7-201ENST00000252622 LPAP08519 4548 aa14.52□□□□□ -0.09
LSM7-201ENST00000252622 A6NDN8 102 aa14.51□□□□□ -0.09
LSM7-201ENST00000252622 COX7BP24311 80 aa14.51□□□□□ -0.09
LSM7-201ENST00000252622 SPAG11AQ6PDA7 123 aa14.51□□□□□ -0.09
LSM7-201ENST00000252622 TRAV13-2A0A0B4J235 113 aa14.5□□□□□ -0.09
LSM7-201ENST00000252622 TRBV7-6A0A0J9YX20 115 aa14.5□□□□□ -0.09
LSM7-201ENST00000252622 COX8AP10176 69 aa14.49□□□□□ -0.09
LSM7-201ENST00000252622 ST20-AS1Q8NBB2 130 aa14.48□□□□□ -0.09
LSM7-201ENST00000252622 Q8NBF4 154 aa14.48□□□□□ -0.09
LSM7-201ENST00000252622 DLEU1O43261 78 aa14.46□□□□□ -0.09
LSM7-201ENST00000252622 A0A1B0GWB2 263 aa14.45□□□□□ -0.1
LSM7-201ENST00000252622 IGLV9-49A0A0B4J1Y8 123 aa14.44□□□□□ -0.1
LSM7-201ENST00000252622 MOBPQ13875 183 aa14.44□□□□□ -0.1
LSM7-201ENST00000252622 C4orf48Q5BLP8 95 aa14.44□□□□□ -0.1
LSM7-201ENST00000252622 A4D1N5 150 aa14.43□□□□□ -0.1
LSM7-201ENST00000252622 SPRR1BP22528 89 aa14.43□□□□□ -0.1
LSM7-201ENST00000252622 SSBP3-AS1Q7Z2R9 100 aa14.43□□□□□ -0.1
LSM7-201ENST00000252622 SPATA45Q537H7 98 aa14.41□□□□□ -0.1
LSM7-201ENST00000252622 PAM16Q9Y3D7 125 aa14.41□□□□□ -0.1
LSM7-201ENST00000252622 SMIM11BQ8TCY0 68 aa14.4□□□□□ -0.1
LSM7-201ENST00000252622 RETNLBQ9BQ08 111 aa14.4□□□□□ -0.1
LSM7-201ENST00000252622 VAMP8Q9BV40 100 aa14.4□□□□□ -0.1
LSM7-201ENST00000252622 HIST1H4GQ99525 98 aa14.39□□□□□ -0.11
LSM7-201ENST00000252622 SPINK1P00995 79 aa14.38□□□□□ -0.11
LSM7-201ENST00000252622 SLC25A34Q6PIV7 304 aa14.38□□□□□ -0.11
LSM7-201ENST00000252622 C14orf144Q96I85 54 aa14.38□□□□□ -0.11
LSM7-201ENST00000252622 RNF213Q63HN8 5207 aa14.36□□□□□ -0.11
LSM7-201ENST00000252622 C9orf153Q5TBE3 101 aa14.36□□□□□ -0.11
LSM7-201ENST00000252622 HIGD1BQ9P298 99 aa14.35□□□□□ -0.11
LSM7-201ENST00000252622 RPS29P62273 56 aaKnown RBP14.33□□□□□ -0.12
LSM7-201ENST00000252622 NHP2Q9NX24 153 aaKnown RBP14.32□□□□□ -0.12
LSM7-201ENST00000252622 TAL2Q16559 108 aa14.31□□□□□ -0.12
LSM7-201ENST00000252622 LAMTOR3Q9UHA4 124 aa14.31□□□□□ -0.12
LSM7-201ENST00000252622 TEX49A0A1B0GTD5 131 aa14.3□□□□□ -0.12
LSM7-201ENST00000252622 VAMP3Q15836 100 aa14.29□□□□□ -0.12
LSM7-201ENST00000252622 C2orf91Q6ZV80 131 aa14.29□□□□□ -0.12
LSM7-201ENST00000252622 C12orf57Q99622 126 aa14.29□□□□□ -0.12
LSM7-201ENST00000252622 TMA7Q9Y2S6 64 aaKnown RBP14.29□□□□□ -0.12
LSM7-201ENST00000252622 IGLV5-48A0A075B6I7 105 aa14.28□□□□□ -0.12
LSM7-201ENST00000252622 DEFB105AQ8NG35 78 aa14.28□□□□□ -0.12
LSM7-201ENST00000252622 IGLV7-46A0A075B6I9 117 aa14.27□□□□□ -0.13
LSM7-201ENST00000252622 PYY3Q5JQD4 70 aa14.27□□□□□ -0.13
LSM7-201ENST00000252622 LINC01547P58512 204 aaPredicted RBP14.26□□□□□ -0.13
LSM7-201ENST00000252622 FP248Q71RG6 208 aaPredicted RBP14.26□□□□□ -0.13
LSM7-201ENST00000252622 TPRXLQ17RH7 258 aa14.25□□□□□ -0.13
LSM7-201ENST00000252622 SLC25A20O43772 301 aa14.24□□□□□ -0.13
LSM7-201ENST00000252622 LINC00575Q6W349 94 aa14.23□□□□□ -0.13
LSM7-201ENST00000252622 Q1RN00 199 aa14.22□□□□□ -0.13
LSM7-201ENST00000252622 Q8N377 158 aa14.22□□□□□ -0.13
LSM7-201ENST00000252622 CFC1BP0CG36 223 aa14.21□□□□□ -0.13
LSM7-201ENST00000252622 CFC1P0CG37 223 aa14.21□□□□□ -0.13
LSM7-201ENST00000252622 SMIM29Q86T20 159 aa14.21□□□□□ -0.13
LSM7-201ENST00000252622 A0A0B4J2C4 111 aa14.19□□□□□ -0.14
LSM7-201ENST00000252622 BVES-AS1Q5T3Y7 98 aa14.19□□□□□ -0.14
LSM7-201ENST00000252622 RAB37Q96AX2 223 aa14.18□□□□□ -0.14
LSM7-201ENST00000252622 hADV29S1A0JD25 119 aa14.17□□□□□ -0.14
LSM7-201ENST00000252622 CEND1Q8N111 149 aa14.17□□□□□ -0.14
LSM7-201ENST00000252622 PRO1933Q9H354 126 aa14.16□□□□□ -0.14
LSM7-201ENST00000252622 TMEM238LA0A1B0GVL6 79 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 A6NJY4 79 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 H7C2G1 150 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 CD164Q04900 197 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 Q6ZQY7 126 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 CDIP1Q9H305 208 aa14.13□□□□□ -0.15
LSM7-201ENST00000252622 LIMD2Q9BT23 127 aa14.11□□□□□ -0.15
LSM7-201ENST00000252622 HRCT1Q6UXD1 115 aa14.09□□□□□ -0.15
LSM7-201ENST00000252622 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 490.4 ms