RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TMEM238LA0A1B0GVL6 79 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 A6NJY4 79 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 M0R378 163 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 NCR3O14931 201 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
DDX39A-201ENST00000242776 CEND1Q8N111 149 aa8.26□□□□□ -1.09
DDX39A-201ENST00000242776 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
DDX39A-201ENST00000242776 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-201ENST00000242776 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
DDX39A-201ENST00000242776 UBE2BP63146 152 aa8.24□□□□□ -1.09
DDX39A-201ENST00000242776 KRTAP7-1Q8IUC3 87 aa8.24□□□□□ -1.09
DDX39A-201ENST00000242776 Q8NDZ9 215 aa8.24□□□□□ -1.09
DDX39A-201ENST00000242776 A4D1N5 150 aa8.23□□□□□ -1.09
DDX39A-201ENST00000242776 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
DDX39A-201ENST00000242776 DDTP30046 118 aa8.21□□□□□ -1.09
DDX39A-201ENST00000242776 LINC00167Q96N53 147 aa8.21□□□□□ -1.09
DDX39A-201ENST00000242776 CBY1Q9Y3M2 126 aa8.21□□□□□ -1.09
DDX39A-201ENST00000242776 TRAV13-2A0A0B4J235 113 aa8.2□□□□□ -1.1
DDX39A-201ENST00000242776 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
DDX39A-201ENST00000242776 M0R143 59 aa8.2□□□□□ -1.1
DDX39A-201ENST00000242776 CTAG1AP78358 180 aa8.2□□□□□ -1.1
DDX39A-201ENST00000242776 IGKV2-28A0A075B6P5 120 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 IGKV2D-28P01615 120 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 RPL13AP40429 203 aaKnown RBP8.19□□□□□ -1.1
DDX39A-201ENST00000242776 OR13C6PQ8NH95 151 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 TMEM126AQ9H061 195 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 FXYD2P54710 66 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
DDX39A-201ENST00000242776 A0A0B4J2C4 111 aa8.18□□□□□ -1.1
DDX39A-201ENST00000242776 TRBV10-3A0A0K0K1G6 114 aa8.18□□□□□ -1.1
DDX39A-201ENST00000242776 A6NDN8 102 aa8.18□□□□□ -1.1
DDX39A-201ENST00000242776 RPL37AP8A6NKH3 93 aa8.18□□□□□ -1.1
DDX39A-201ENST00000242776 LINC00337Q8N6G1 96 aa8.18□□□□□ -1.1
DDX39A-201ENST00000242776 PRYO14603 147 aa8.17□□□□□ -1.1
DDX39A-201ENST00000242776 IGLV6-57P01721 117 aa8.17□□□□□ -1.1
DDX39A-201ENST00000242776 CFC1BP0CG36 223 aa8.16□□□□□ -1.1
DDX39A-201ENST00000242776 CFC1P0CG37 223 aa8.16□□□□□ -1.1
DDX39A-201ENST00000242776 HINT1P49773 126 aaPredicted RBP8.16□□□□□ -1.1
DDX39A-201ENST00000242776 BVES-AS1Q5T3Y7 98 aa8.16□□□□□ -1.1
DDX39A-201ENST00000242776 NHP2Q9NX24 153 aaKnown RBP8.15□□□□□ -1.1
DDX39A-201ENST00000242776 TRAV23DV6A0A075B6W5 121 aa8.14□□□□□ -1.11
DDX39A-201ENST00000242776 RETNLBQ9BQ08 111 aa8.14□□□□□ -1.11
DDX39A-201ENST00000242776 KCNQ1DNQ9H478 68 aa8.14□□□□□ -1.11
DDX39A-201ENST00000242776 A0A1B0GWB2 263 aa8.12□□□□□ -1.11
DDX39A-201ENST00000242776 PCP4L1A6NKN8 68 aa8.12□□□□□ -1.11
DDX39A-201ENST00000242776 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
DDX39A-201ENST00000242776 A0A087X002 238 aa8.11□□□□□ -1.11
DDX39A-201ENST00000242776 ZNF73O43830 326 aaPredicted RBP8.11□□□□□ -1.11
DDX39A-201ENST00000242776 BATFQ16520 125 aa8.11□□□□□ -1.11
DDX39A-201ENST00000242776 Q1RN00 199 aa8.11□□□□□ -1.11
DDX39A-201ENST00000242776 ETDCA0A1B0GVM5 59 aa8.1□□□□□ -1.11
DDX39A-201ENST00000242776 ZNF861PO60384 105 aa8.1□□□□□ -1.11
DDX39A-201ENST00000242776 BCE1O60756 84 aa8.1□□□□□ -1.11
DDX39A-201ENST00000242776 TYMSOSQ8TAI1 123 aa8.1□□□□□ -1.11
DDX39A-201ENST00000242776 K7ERJ3 54 aa8.09□□□□□ -1.11
DDX39A-201ENST00000242776 SPRR1AP35321 89 aa8.09□□□□□ -1.11
DDX39A-201ENST00000242776 FAM19A1Q7Z5A9 133 aa8.09□□□□□ -1.11
DDX39A-201ENST00000242776 ANAPC11Q9NYG5 84 aa8.09□□□□□ -1.11
DDX39A-201ENST00000242776 MUC17Q685J3 4493 aa8.08□□□□□ -1.12
DDX39A-201ENST00000242776 H7C2G1 150 aa8.08□□□□□ -1.12
DDX39A-201ENST00000242776 UBE2AP49459 152 aa8.08□□□□□ -1.12
DDX39A-201ENST00000242776 SMIM11BQ8TCY0 68 aa8.08□□□□□ -1.12
DDX39A-201ENST00000242776 C6orf99Q4VX62 202 aa8.07□□□□□ -1.12
DDX39A-201ENST00000242776 CDIP1Q9H305 208 aa8.07□□□□□ -1.12
DDX39A-201ENST00000242776 RPL28P46779 137 aaKnown RBP8.06□□□□□ -1.12
DDX39A-201ENST00000242776 VAMP3Q15836 100 aa8.06□□□□□ -1.12
DDX39A-201ENST00000242776 TRBV7-6A0A0J9YX20 115 aa8.06□□□□□ -1.12
DDX39A-201ENST00000242776 CRYGAP11844 174 aa8.05□□□□□ -1.12
DDX39A-201ENST00000242776 COX7BP24311 80 aa8.05□□□□□ -1.12
DDX39A-201ENST00000242776 B5MCH6 92 aa8.04□□□□□ -1.12
DDX39A-201ENST00000242776 KRTAP4-16G5E9R7 235 aaPredicted RBP8.04□□□□□ -1.12
DDX39A-201ENST00000242776 Q6ZRX8 168 aa8.04□□□□□ -1.12
DDX39A-201ENST00000242776 PSMB2P49721 201 aa8.03□□□□□ -1.12
DDX39A-201ENST00000242776 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
DDX39A-201ENST00000242776 PRLHP81277 87 aa8.03□□□□□ -1.12
DDX39A-201ENST00000242776 SNHG12Q9BXW3 62 aa8.03□□□□□ -1.12
DDX39A-201ENST00000242776 COX6CP09669 75 aa8.02□□□□□ -1.13
DDX39A-201ENST00000242776 KRTAP13-1Q8IUC0 172 aa8.01□□□□□ -1.13
DDX39A-201ENST00000242776 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 H0YGX0 51 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 TRIAP1O43715 76 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 KRTAP13-2Q52LG2 175 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 HIGD2AQ9BW72 106 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 DHRS4-AS1Q9P1J3 65 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 FSIP2Q5CZC0 6907 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 SLC25A20O43772 301 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 SNCGO76070 127 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 COL5A1-AS1Q5SY13 56 aa8□□□□□ -1.13
DDX39A-201ENST00000242776 LINC00304Q8N9R0 145 aa7.99□□□□□ -1.13
DDX39A-201ENST00000242776 LYRM7Q5U5X0 104 aa7.98□□□□□ -1.13
DDX39A-201ENST00000242776 Q9BRP9 147 aa7.98□□□□□ -1.13
DDX39A-201ENST00000242776 SCGB1C2P0DMR2 95 aa7.97□□□□□ -1.13
DDX39A-201ENST00000242776 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
DDX39A-201ENST00000242776 SMCR5Q8TEV8 140 aa7.97□□□□□ -1.13
DDX39A-201ENST00000242776 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.13
DDX39A-201ENST00000242776 C9orf118A6NHY6 69 aa7.95□□□□□ -1.14
DDX39A-201ENST00000242776 TAX1BP3O14907 124 aa7.95□□□□□ -1.14
DDX39A-201ENST00000242776 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
DDX39A-201ENST00000242776 A0A1B0GX51 115 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms