RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 PKIGQ9Y2B9 76 aa11.76□□□□□ -0.53
SNX17-201ENST00000233575 DNAH8Q96JB1 4490 aa11.75□□□□□ -0.53
SNX17-201ENST00000233575 M0QXV9 152 aa11.75□□□□□ -0.53
SNX17-201ENST00000233575 MTURNQ8N3F0 131 aa11.75□□□□□ -0.53
SNX17-201ENST00000233575 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
SNX17-201ENST00000233575 ATXN8Q156A1 80 aa11.73□□□□□ -0.53
SNX17-201ENST00000233575 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
SNX17-201ENST00000233575 RYR3Q15413 4870 aa11.72□□□□□ -0.53
SNX17-201ENST00000233575 IGLV1-50A0A075B6I6 118 aa11.72□□□□□ -0.53
SNX17-201ENST00000233575 F8W1H4 67 aa11.72□□□□□ -0.53
SNX17-201ENST00000233575 ZNF73O43830 326 aaPredicted RBP11.72□□□□□ -0.53
SNX17-201ENST00000233575 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
SNX17-201ENST00000233575 LST1O00453 97 aa11.71□□□□□ -0.53
SNX17-201ENST00000233575 PHF5AQ7RTV0 110 aaKnown RBP11.71□□□□□ -0.53
SNX17-201ENST00000233575 A0A087WYN8 130 aa11.7□□□□□ -0.54
SNX17-201ENST00000233575 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
SNX17-201ENST00000233575 PRO0461Q9UI25 63 aa11.7□□□□□ -0.54
SNX17-201ENST00000233575 PKHD1P08F94 4074 aa11.7□□□□□ -0.54
SNX17-201ENST00000233575 DIRC1Q969H9 104 aa11.69□□□□□ -0.54
SNX17-201ENST00000233575 KRTAP11-1Q8IUC1 163 aa11.69□□□□□ -0.54
SNX17-201ENST00000233575 H0YGX0 51 aa11.68□□□□□ -0.54
SNX17-201ENST00000233575 C9JAW5 83 aa11.66□□□□□ -0.54
SNX17-201ENST00000233575 FAM30AQ9NZY2 134 aa11.66□□□□□ -0.54
SNX17-201ENST00000233575 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
SNX17-201ENST00000233575 KRTAP10-1P60331 282 aa11.65□□□□□ -0.54
SNX17-201ENST00000233575 LINC00336Q6ZUF6 198 aa11.65□□□□□ -0.54
SNX17-201ENST00000233575 EPM2AB3EWF7 344 aa11.64□□□□□ -0.55
SNX17-201ENST00000233575 PRYO14603 147 aa11.64□□□□□ -0.55
SNX17-201ENST00000233575 ELOF1P60002 83 aaKnown RBP11.64□□□□□ -0.55
SNX17-201ENST00000233575 COX7BP24311 80 aa11.63□□□□□ -0.55
SNX17-201ENST00000233575 SPRR1AP35321 89 aa11.63□□□□□ -0.55
SNX17-201ENST00000233575 KRTAP4-16G5E9R7 235 aaPredicted RBP11.62□□□□□ -0.55
SNX17-201ENST00000233575 SLC25A20O43772 301 aa11.62□□□□□ -0.55
SNX17-201ENST00000233575 UBE2BP63146 152 aa11.62□□□□□ -0.55
SNX17-201ENST00000233575 LINC00575Q6W349 94 aa11.62□□□□□ -0.55
SNX17-201ENST00000233575 TRACP01848 142 aa11.62□□□□□ -0.55
SNX17-201ENST00000233575 PLAC8Q9NZF1 115 aa11.62□□□□□ -0.55
SNX17-201ENST00000233575 LRP1BQ9NZR2 4599 aa11.61□□□□□ -0.55
SNX17-201ENST00000233575 A0A1B0GVY2 172 aa11.6□□□□□ -0.55
SNX17-201ENST00000233575 REG3GQ6UW15 175 aa11.6□□□□□ -0.55
SNX17-201ENST00000233575 TRBV7-6A0A0J9YX20 115 aa11.6□□□□□ -0.55
SNX17-201ENST00000233575 LINC00528Q8N1L1 170 aa11.6□□□□□ -0.55
SNX17-201ENST00000233575 DYNC1H1Q14204 4646 aaKnown RBP11.59□□□□□ -0.55
SNX17-201ENST00000233575 ETDBQ3ZM63 59 aa11.59□□□□□ -0.55
SNX17-201ENST00000233575 HAMPP81172 84 aa11.59□□□□□ -0.55
SNX17-201ENST00000233575 B5MCH6 92 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 Q6ZSA8 131 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 ANKRD29Q8N6D5 301 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 ETDCA0A1B0GVM5 59 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 hADV29S1A0JD25 119 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 DNAL4O96015 105 aa11.57□□□□□ -0.56
SNX17-201ENST00000233575 Q6ZRX8 168 aa11.56□□□□□ -0.56
SNX17-201ENST00000233575 CIRBP-AS1Q8TBR5 109 aa11.56□□□□□ -0.56
SNX17-201ENST00000233575 A0A1B0GX51 115 aa11.55□□□□□ -0.56
SNX17-201ENST00000233575 Q9BRP9 147 aa11.55□□□□□ -0.56
SNX17-201ENST00000233575 SCXQ7RTU7 201 aa11.54□□□□□ -0.56
SNX17-201ENST00000233575 H3BT86 120 aa11.53□□□□□ -0.56
SNX17-201ENST00000233575 PRLHP81277 87 aa11.53□□□□□ -0.56
SNX17-201ENST00000233575 LINC01600Q96MT4 127 aa11.53□□□□□ -0.56
SNX17-201ENST00000233575 FAM19A1Q7Z5A9 133 aa11.53□□□□□ -0.56
SNX17-201ENST00000233575 BAALC-AS2P0C853 105 aa11.52□□□□□ -0.57
SNX17-201ENST00000233575 Q6ZQY7 126 aa11.52□□□□□ -0.57
SNX17-201ENST00000233575 TEN1Q86WV5 123 aa11.51□□□□□ -0.57
SNX17-201ENST00000233575 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
SNX17-201ENST00000233575 ERC2-IT1O76042 136 aa11.49□□□□□ -0.57
SNX17-201ENST00000233575 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
SNX17-201ENST00000233575 SNCGO76070 127 aa11.48□□□□□ -0.57
SNX17-201ENST00000233575 SMCR5Q8TEV8 140 aa11.48□□□□□ -0.57
SNX17-201ENST00000233575 PSORS1C2Q9UIG4 136 aa11.48□□□□□ -0.57
SNX17-201ENST00000233575 BCE1O60756 84 aa11.46□□□□□ -0.57
SNX17-201ENST00000233575 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.57
SNX17-201ENST00000233575 DHRS4-AS1Q9P1J3 65 aa11.46□□□□□ -0.57
SNX17-201ENST00000233575 APOBP04114 4563 aaKnown RBP11.45□□□□□ -0.58
SNX17-201ENST00000233575 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
SNX17-201ENST00000233575 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.45□□□□□ -0.58
SNX17-201ENST00000233575 ST20-AS1Q8NBB2 130 aa11.45□□□□□ -0.58
SNX17-201ENST00000233575 HIGD2AQ9BW72 106 aa11.45□□□□□ -0.58
SNX17-201ENST00000233575 TEX49A0A1B0GTD5 131 aa11.44□□□□□ -0.58
SNX17-201ENST00000233575 MT-ATP8P03928 68 aa11.43□□□□□ -0.58
SNX17-201ENST00000233575 UBE2AP49459 152 aa11.43□□□□□ -0.58
SNX17-201ENST00000233575 KRTAP13-1Q8IUC0 172 aa11.43□□□□□ -0.58
SNX17-201ENST00000233575 PPDPFLQ8WWR9 84 aa11.43□□□□□ -0.58
SNX17-201ENST00000233575 C1orf137Q5JT78 98 aa11.42□□□□□ -0.58
SNX17-201ENST00000233575 XGP55808 180 aa11.41□□□□□ -0.58
SNX17-201ENST00000233575 DEFB105AQ8NG35 78 aa11.41□□□□□ -0.58
SNX17-201ENST00000233575 H0Y9J4 135 aa11.4□□□□□ -0.58
SNX17-201ENST00000233575 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
SNX17-201ENST00000233575 LINC01547P58512 204 aaPredicted RBP11.4□□□□□ -0.59
SNX17-201ENST00000233575 Q8N377 158 aa11.37□□□□□ -0.59
SNX17-201ENST00000233575 ANAPC13Q9BS18 74 aa11.37□□□□□ -0.59
SNX17-201ENST00000233575 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
SNX17-201ENST00000233575 IGLV5-48A0A075B6I7 105 aa11.34□□□□□ -0.59
SNX17-201ENST00000233575 C3orf22Q8N5N4 141 aa11.34□□□□□ -0.59
SNX17-201ENST00000233575 SS18L2Q9UHA2 77 aa11.33□□□□□ -0.6
SNX17-201ENST00000233575 LAMTOR3Q9UHA4 124 aa11.33□□□□□ -0.6
SNX17-201ENST00000233575 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
SNX17-201ENST00000233575 OBSCN-AS1Q96MR7 158 aa11.32□□□□□ -0.6
SNX17-201ENST00000233575 ZNF861PO60384 105 aa11.31□□□□□ -0.6
SNX17-201ENST00000233575 EPPK1P58107 5090 aaKnown RBP11.31□□□□□ -0.6
SNX17-201ENST00000233575 FAT1Q14517 4588 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms