RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PRR4Q16378 134 aa9.38□□□□□ -0.91
SF1-201ENST00000227503 COX7BP24311 80 aa9.38□□□□□ -0.91
SF1-201ENST00000227503 J3QKU1 62 aa9.38□□□□□ -0.91
SF1-201ENST00000227503 PDE6GP18545 87 aa9.38□□□□□ -0.91
SF1-201ENST00000227503 ATP5EP56381 51 aaPredicted RBP9.37□□□□□ -0.91
SF1-201ENST00000227503 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
SF1-201ENST00000227503 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
SF1-201ENST00000227503 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
SF1-201ENST00000227503 SMIM29Q86T20 159 aa9.35□□□□□ -0.91
SF1-201ENST00000227503 PKD1L1Q8TDX9 2849 aa9.35□□□□□ -0.91
SF1-201ENST00000227503 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
SF1-201ENST00000227503 PSPHP1O15172 72 aa9.34□□□□□ -0.91
SF1-201ENST00000227503 HTN3P15516 51 aa9.34□□□□□ -0.91
SF1-201ENST00000227503 Q8NAQ8 132 aa9.34□□□□□ -0.91
SF1-201ENST00000227503 APOC4P55056 127 aa9.34□□□□□ -0.92
SF1-201ENST00000227503 ELOF1P60002 83 aaKnown RBP9.32□□□□□ -0.92
SF1-201ENST00000227503 LELP1Q5T871 98 aa9.3□□□□□ -0.92
SF1-201ENST00000227503 A8MU10 97 aa9.3□□□□□ -0.92
SF1-201ENST00000227503 Q6ZRP5 223 aa9.3□□□□□ -0.92
SF1-201ENST00000227503 A0A0J9YWU9 116 aa9.29□□□□□ -0.92
SF1-201ENST00000227503 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
SF1-201ENST00000227503 PRR34Q9NV39 138 aa9.29□□□□□ -0.92
SF1-201ENST00000227503 ERC2-IT1O76042 136 aa9.29□□□□□ -0.92
SF1-201ENST00000227503 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
SF1-201ENST00000227503 SPART-AS1P0CW21 52 aa9.28□□□□□ -0.92
SF1-201ENST00000227503 hDV103S1A0JD37 113 aa9.27□□□□□ -0.92
SF1-201ENST00000227503 INAFM1C9JVW0 142 aa9.26□□□□□ -0.93
SF1-201ENST00000227503 VPREB1P12018 145 aa9.26□□□□□ -0.93
SF1-201ENST00000227503 LINC00528Q8N1L1 170 aa9.26□□□□□ -0.93
SF1-201ENST00000227503 GVQW2A0A096LPI5 108 aaPredicted RBP9.24□□□□□ -0.93
SF1-201ENST00000227503 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
SF1-201ENST00000227503 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
SF1-201ENST00000227503 STAB1Q9NY15 2570 aa9.21□□□□□ -0.93
SF1-201ENST00000227503 PMAIP1Q13794 54 aa9.21□□□□□ -0.93
SF1-201ENST00000227503 DEFB116Q30KQ4 102 aa9.21□□□□□ -0.93
SF1-201ENST00000227503 Q6ZRU5 148 aa9.21□□□□□ -0.93
SF1-201ENST00000227503 BAHCC1Q9P281 2608 aa9.21□□□□□ -0.93
SF1-201ENST00000227503 A0A0G2JQZ4 141 aa9.21□□□□□ -0.94
SF1-201ENST00000227503 A0A1W2PNN7 141 aa9.21□□□□□ -0.94
SF1-201ENST00000227503 H3BQ85 93 aa9.21□□□□□ -0.94
SF1-201ENST00000227503 Q8N377 158 aa9.2□□□□□ -0.94
SF1-201ENST00000227503 TRAV22A0A0B4J277 110 aa9.19□□□□□ -0.94
SF1-201ENST00000227503 KPRPQ5T749 579 aaPredicted RBP9.19□□□□□ -0.94
SF1-201ENST00000227503 A0A1W2PNM2 257 aa9.18□□□□□ -0.94
SF1-201ENST00000227503 K7EQZ3 153 aa9.18□□□□□ -0.94
SF1-201ENST00000227503 M0R378 163 aa9.18□□□□□ -0.94
SF1-201ENST00000227503 A8MUN3 132 aa9.18□□□□□ -0.94
SF1-201ENST00000227503 PRR15Q8IV56 129 aa9.18□□□□□ -0.94
SF1-201ENST00000227503 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.17□□□□□ -0.94
SF1-201ENST00000227503 KRTAP26-1Q6PEX3 210 aa9.16□□□□□ -0.94
SF1-201ENST00000227503 WFDC10BQ8IUB3 73 aa9.16□□□□□ -0.94
SF1-201ENST00000227503 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
SF1-201ENST00000227503 MAST4O15021 2626 aa9.16□□□□□ -0.94
SF1-201ENST00000227503 FBN1P35555 2871 aaKnown RBP9.15□□□□□ -0.94
SF1-201ENST00000227503 Q1T7F1 81 aa9.15□□□□□ -0.94
SF1-201ENST00000227503 DSCR10P59022 87 aa9.14□□□□□ -0.95
SF1-201ENST00000227503 SERTAD4-AS1Q5TG53 156 aa9.14□□□□□ -0.95
SF1-201ENST00000227503 NOTCH1P46531 2555 aa9.13□□□□□ -0.95
SF1-201ENST00000227503 H3BNG1 76 aa9.13□□□□□ -0.95
SF1-201ENST00000227503 ZCCHC13Q8WW36 166 aaKnown RBP9.13□□□□□ -0.95
SF1-201ENST00000227503 RETNQ9HD89 108 aa9.13□□□□□ -0.95
SF1-201ENST00000227503 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
SF1-201ENST00000227503 ETDCA0A1B0GVM5 59 aa9.11□□□□□ -0.95
SF1-201ENST00000227503 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
SF1-201ENST00000227503 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
SF1-201ENST00000227503 WFDC13Q8IUB5 93 aa9.11□□□□□ -0.95
SF1-201ENST00000227503 ANK2Q01484 3957 aa9.11□□□□□ -0.95
SF1-201ENST00000227503 LCE6AA0A183 80 aa9.1□□□□□ -0.95
SF1-201ENST00000227503 PSCAO43653 123 aa9.1□□□□□ -0.95
SF1-201ENST00000227503 C7orf33Q8WU49 177 aa9.1□□□□□ -0.95
SF1-201ENST00000227503 SRRM2Q9UQ35 2752 aaKnown RBP9.09□□□□□ -0.95
SF1-201ENST00000227503 IGLV5-48A0A075B6I7 105 aa9.09□□□□□ -0.95
SF1-201ENST00000227503 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
SF1-201ENST00000227503 Q9BRP9 147 aa9.09□□□□□ -0.95
SF1-201ENST00000227503 KRTAP10-11P60412 298 aa9.08□□□□□ -0.96
SF1-201ENST00000227503 NKAPP1Q8N9T2 125 aa9.08□□□□□ -0.96
SF1-201ENST00000227503 OXLD1Q5BKU9 147 aa9.08□□□□□ -0.96
SF1-201ENST00000227503 COL6A5A8TX70 2615 aa9.07□□□□□ -0.96
SF1-201ENST00000227503 CSMD3Q7Z407 3707 aa9.07□□□□□ -0.96
SF1-201ENST00000227503 CMYA5Q8N3K9 4069 aa9.07□□□□□ -0.96
SF1-201ENST00000227503 SYCNQ0VAF6 134 aa9.07□□□□□ -0.96
SF1-201ENST00000227503 Q8NBF4 154 aa9.05□□□□□ -0.96
SF1-201ENST00000227503 Q5VV11 94 aa9.04□□□□□ -0.96
SF1-201ENST00000227503 TENM3Q9P273 2699 aa9.04□□□□□ -0.96
SF1-201ENST00000227503 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
SF1-201ENST00000227503 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
SF1-201ENST00000227503 HCG22E2RYF7 251 aa9.03□□□□□ -0.96
SF1-201ENST00000227503 SPTSSBQ8NFR3 76 aa9.03□□□□□ -0.96
SF1-201ENST00000227503 IGKV2D-24A0A075B6R9 120 aa9.03□□□□□ -0.96
SF1-201ENST00000227503 LINC01556Q5JQF7 62 aa9.02□□□□□ -0.96
SF1-201ENST00000227503 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.96
SF1-201ENST00000227503 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
SF1-201ENST00000227503 TNP2Q05952 138 aa9.01□□□□□ -0.97
SF1-201ENST00000227503 Q6ZRX8 168 aa9.01□□□□□ -0.97
SF1-201ENST00000227503 DNAH3Q8TD57 4116 aa9□□□□□ -0.97
SF1-201ENST00000227503 CYP4F30PQ9H0H9 118 aa9□□□□□ -0.97
SF1-201ENST00000227503 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
SF1-201ENST00000227503 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
SF1-201ENST00000227503 NBEAL1Q6ZS30 2694 aa8.99□□□□□ -0.97
SF1-201ENST00000227503 DEFB131BA0A096LNP1 70 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms