RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 SOSTDC1Q6X4U4 206 aa8.55□□□□□ -1.04
NME3-201ENST00000219302 MIEN1Q9BRT3 115 aa8.55□□□□□ -1.04
NME3-201ENST00000219302 CFC1BP0CG36 223 aa8.54□□□□□ -1.04
NME3-201ENST00000219302 SPRR1BP22528 89 aa8.54□□□□□ -1.04
NME3-201ENST00000219302 SNAPINO95295 136 aa8.53□□□□□ -1.04
NME3-201ENST00000219302 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
NME3-201ENST00000219302 PLNP26678 52 aa8.53□□□□□ -1.04
NME3-201ENST00000219302 NMUP48645 174 aa8.53□□□□□ -1.04
NME3-201ENST00000219302 ADAMTSL4-AS1Q5T5F5 129 aa8.53□□□□□ -1.04
NME3-201ENST00000219302 SVBPQ8N300 66 aa8.52□□□□□ -1.05
NME3-201ENST00000219302 C9orf92A6NGG3 77 aa8.51□□□□□ -1.05
NME3-201ENST00000219302 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
NME3-201ENST00000219302 LINC00310P59036 64 aa8.51□□□□□ -1.05
NME3-201ENST00000219302 LGALS3P17931 250 aaKnown RBP8.5□□□□□ -1.05
NME3-201ENST00000219302 KRTAP10-6P60371 365 aaPredicted RBP8.5□□□□□ -1.05
NME3-201ENST00000219302 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
NME3-201ENST00000219302 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
NME3-201ENST00000219302 DPM2O94777 84 aa8.49□□□□□ -1.05
NME3-201ENST00000219302 HERVK_113P61574 105 aa8.49□□□□□ -1.05
NME3-201ENST00000219302 NPC2P61916 151 aa8.49□□□□□ -1.05
NME3-201ENST00000219302 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
NME3-201ENST00000219302 A0A0J9YXY3 114 aa8.48□□□□□ -1.05
NME3-201ENST00000219302 HINT1P49773 126 aaPredicted RBP8.48□□□□□ -1.05
NME3-201ENST00000219302 SERF1AO75920 110 aa8.47□□□□□ -1.05
NME3-201ENST00000219302 IGKCP01834 107 aa8.47□□□□□ -1.05
NME3-201ENST00000219302 NDUFA5Q16718 116 aa8.47□□□□□ -1.05
NME3-201ENST00000219302 SLC25A34Q6PIV7 304 aa8.47□□□□□ -1.05
NME3-201ENST00000219302 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
NME3-201ENST00000219302 TRGC2P03986 189 aa8.45□□□□□ -1.06
NME3-201ENST00000219302 DHRS4-AS1Q9P1J3 65 aa8.45□□□□□ -1.06
NME3-201ENST00000219302 LAMTOR3Q9UHA4 124 aa8.45□□□□□ -1.06
NME3-201ENST00000219302 HSPB8Q9UJY1 196 aa8.45□□□□□ -1.06
NME3-201ENST00000219302 FABP4P15090 132 aa8.44□□□□□ -1.06
NME3-201ENST00000219302 CD164Q04900 197 aa8.44□□□□□ -1.06
NME3-201ENST00000219302 LITAFQ99732 161 aa8.44□□□□□ -1.06
NME3-201ENST00000219302 E9PLD3 99 aa8.43□□□□□ -1.06
NME3-201ENST00000219302 LINC00308Q8TCZ7 52 aa8.43□□□□□ -1.06
NME3-201ENST00000219302 SPANXCQ9NY87 97 aa8.43□□□□□ -1.06
NME3-201ENST00000219302 Q5XG85 94 aa8.42□□□□□ -1.06
NME3-201ENST00000219302 OR13C6PQ8NH95 151 aa8.41□□□□□ -1.06
NME3-201ENST00000219302 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.06
NME3-201ENST00000219302 C1orf195Q5TG92 126 aa8.4□□□□□ -1.06
NME3-201ENST00000219302 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
NME3-201ENST00000219302 FLGP20930 4061 aaPredicted RBP8.39□□□□□ -1.07
NME3-201ENST00000219302 TAL2Q16559 108 aa8.39□□□□□ -1.07
NME3-201ENST00000219302 Q1RN00 199 aa8.39□□□□□ -1.07
NME3-201ENST00000219302 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
NME3-201ENST00000219302 H7C2G1 150 aa8.38□□□□□ -1.07
NME3-201ENST00000219302 TIMM17BO60830 172 aa8.38□□□□□ -1.07
NME3-201ENST00000219302 COX7BP24311 80 aa8.38□□□□□ -1.07
NME3-201ENST00000219302 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
NME3-201ENST00000219302 SMIM29Q86T20 159 aa8.38□□□□□ -1.07
NME3-201ENST00000219302 TEX49A0A1B0GTD5 131 aa8.37□□□□□ -1.07
NME3-201ENST00000219302 M0R2T5 61 aa8.37□□□□□ -1.07
NME3-201ENST00000219302 C6orf99Q4VX62 202 aa8.37□□□□□ -1.07
NME3-201ENST00000219302 DEFB105AQ8NG35 78 aa8.37□□□□□ -1.07
NME3-201ENST00000219302 AKR1D1P51857 326 aa8.35□□□□□ -1.07
NME3-201ENST00000219302 A0A0G2JQZ4 141 aa8.34□□□□□ -1.07
NME3-201ENST00000219302 LINC00518Q8N0U6 118 aa8.34□□□□□ -1.07
NME3-201ENST00000219302 IGLV5-48A0A075B6I7 105 aa8.32□□□□□ -1.08
NME3-201ENST00000219302 TRBV7-6A0A0J9YX20 115 aa8.32□□□□□ -1.08
NME3-201ENST00000219302 COX6B2Q6YFQ2 88 aa8.32□□□□□ -1.08
NME3-201ENST00000219302 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
NME3-201ENST00000219302 TTTY13Q9BZ97 58 aa8.31□□□□□ -1.08
NME3-201ENST00000219302 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
NME3-201ENST00000219302 COLCA2A8K830 154 aa8.28□□□□□ -1.08
NME3-201ENST00000219302 LINC01545Q5VT33 79 aa8.28□□□□□ -1.08
NME3-201ENST00000219302 A0A1B0GWB2 263 aa8.27□□□□□ -1.09
NME3-201ENST00000219302 TCL1BO95988 128 aa8.23□□□□□ -1.09
NME3-201ENST00000219302 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
NME3-201ENST00000219302 A4D1N5 150 aa8.21□□□□□ -1.1
NME3-201ENST00000219302 A6NDN8 102 aa8.21□□□□□ -1.1
NME3-201ENST00000219302 IFITM1P13164 125 aa8.2□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BKO60814 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BJP06899 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BOP23527 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BBP33778 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BDP58876 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BCP62807 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST2H2BEQ16778 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.18□□□□□ -1.1
NME3-201ENST00000219302 MUSTN1Q8IVN3 82 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BHQ93079 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BNQ99877 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 HIST1H2BMQ99879 126 aa8.18□□□□□ -1.1
NME3-201ENST00000219302 C3orf79P0CE67 100 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 SCGB1D4Q6XE38 83 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 SMIM11BQ8TCY0 68 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 COPS9Q8WXC6 57 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 NHP2Q9NX24 153 aaKnown RBP8.17□□□□□ -1.1
NME3-201ENST00000219302 SSPOA2VEC9 5147 aa8.17□□□□□ -1.1
NME3-201ENST00000219302 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.16□□□□□ -1.1
NME3-201ENST00000219302 Q6ZVH6 145 aa8.16□□□□□ -1.1
NME3-201ENST00000219302 USH2AO75445 5202 aa8.16□□□□□ -1.1
NME3-201ENST00000219302 Q6Q795 121 aa8.15□□□□□ -1.1
NME3-201ENST00000219302 Q75L30 129 aa8.15□□□□□ -1.1
NME3-201ENST00000219302 KRTAP9-7A8MTY7 169 aa8.14□□□□□ -1.11
NME3-201ENST00000219302 ANKRD39Q53RE8 183 aa8.14□□□□□ -1.11
NME3-201ENST00000219302 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms