RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 A0A0G2JQZ4 141 aa6.9□□□□□ -1.3
VCL-201ENST00000211998 A0A1W2PNN7 141 aa6.9□□□□□ -1.3
VCL-201ENST00000211998 PLA2G1BP04054 148 aaKnown RBP6.9□□□□□ -1.3
VCL-201ENST00000211998 ZFYVE26Q68DK2 2539 aa6.9□□□□□ -1.31
VCL-201ENST00000211998 IGLV1-50A0A075B6I6 118 aa6.9□□□□□ -1.31
VCL-201ENST00000211998 OXTP01178 125 aa6.89□□□□□ -1.31
VCL-201ENST00000211998 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
VCL-201ENST00000211998 Q75L30 129 aa6.88□□□□□ -1.31
VCL-201ENST00000211998 TYMSOSQ8TAI1 123 aa6.88□□□□□ -1.31
VCL-201ENST00000211998 WWC2-AS2Q96NR7 200 aa6.87□□□□□ -1.31
VCL-201ENST00000211998 PRAC1Q96KF2 57 aa6.87□□□□□ -1.31
VCL-201ENST00000211998 A0A1W2PNM2 257 aa6.87□□□□□ -1.31
VCL-201ENST00000211998 TLN2Q9Y4G6 2542 aa6.86□□□□□ -1.31
VCL-201ENST00000211998 CHTF8P0CG12 524 aa6.86□□□□□ -1.31
VCL-201ENST00000211998 ANKRD11Q6UB99 2663 aaPredicted RBP6.85□□□□□ -1.31
VCL-201ENST00000211998 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
VCL-201ENST00000211998 A0A1B0GVX0 72 aa6.84□□□□□ -1.31
VCL-201ENST00000211998 Q96NJ1 140 aa6.83□□□□□ -1.32
VCL-201ENST00000211998 PRR26Q8N8Z3 221 aa6.83□□□□□ -1.32
VCL-201ENST00000211998 Q8N9P0 234 aaPredicted RBP6.82□□□□□ -1.32
VCL-201ENST00000211998 FASNP49327 2511 aaKnown RBP6.82□□□□□ -1.32
VCL-201ENST00000211998 CEP295Q9C0D2 2601 aa6.82□□□□□ -1.32
VCL-201ENST00000211998 DSCR10P59022 87 aa6.82□□□□□ -1.32
VCL-201ENST00000211998 CSNK1G2-AS1Q8NCQ2 148 aa6.81□□□□□ -1.32
VCL-201ENST00000211998 Q5VV11 94 aa6.8□□□□□ -1.32
VCL-201ENST00000211998 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
VCL-201ENST00000211998 USP9YO00507 2555 aaPredicted RBP6.8□□□□□ -1.32
VCL-201ENST00000211998 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
VCL-201ENST00000211998 PCSK5Q92824 1860 aa6.79□□□□□ -1.32
VCL-201ENST00000211998 FAM104AQ969W3 186 aa6.78□□□□□ -1.32
VCL-201ENST00000211998 SPTBN4Q9H254 2564 aa6.78□□□□□ -1.32
VCL-201ENST00000211998 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.32
VCL-201ENST00000211998 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.32
VCL-201ENST00000211998 SETD2Q9BYW2 2564 aaPredicted RBP6.77□□□□□ -1.33
VCL-201ENST00000211998 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
VCL-201ENST00000211998 C19orf73Q9NVV2 129 aa6.77□□□□□ -1.33
VCL-201ENST00000211998 PRR34Q9NV39 138 aa6.77□□□□□ -1.33
VCL-201ENST00000211998 PKD1L2Q7Z442 2459 aa6.77□□□□□ -1.33
VCL-201ENST00000211998 LINC01558Q9Y6Z2 57 aa6.77□□□□□ -1.33
VCL-201ENST00000211998 A0A096LNT2 108 aa6.75□□□□□ -1.33
VCL-201ENST00000211998 K7EIL1 84 aa6.74□□□□□ -1.33
VCL-201ENST00000211998 KRTAP10-11P60412 298 aa6.73□□□□□ -1.33
VCL-201ENST00000211998 CSAG1Q6PB30 78 aa6.73□□□□□ -1.33
VCL-201ENST00000211998 LINC00612Q8N6U2 182 aa6.73□□□□□ -1.33
VCL-201ENST00000211998 J3QL48 77 aa6.72□□□□□ -1.33
VCL-201ENST00000211998 PLA2G2DQ9UNK4 145 aa6.72□□□□□ -1.33
VCL-201ENST00000211998 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.33
VCL-201ENST00000211998 A0A0D9SG42 100 aa6.71□□□□□ -1.34
VCL-201ENST00000211998 ANKRD17O75179 2603 aaKnown RBP6.7□□□□□ -1.34
VCL-201ENST00000211998 SPINK7P58062 85 aa6.7□□□□□ -1.34
VCL-201ENST00000211998 ZNF861PO60384 105 aa6.7□□□□□ -1.34
VCL-201ENST00000211998 CENPFP49454 3210 aa6.69□□□□□ -1.34
VCL-201ENST00000211998 MTORP42345 2549 aa6.69□□□□□ -1.34
VCL-201ENST00000211998 LINC00304Q8N9R0 145 aa6.69□□□□□ -1.34
VCL-201ENST00000211998 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
VCL-201ENST00000211998 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
VCL-201ENST00000211998 Q8N1X5 172 aa6.68□□□□□ -1.34
VCL-201ENST00000211998 A0A087WTM6 91 aa6.68□□□□□ -1.34
VCL-201ENST00000211998 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
VCL-201ENST00000211998 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
VCL-201ENST00000211998 EPG5Q9HCE0 2579 aa6.65□□□□□ -1.35
VCL-201ENST00000211998 CNBPP62633 177 aaKnown RBP6.64□□□□□ -1.35
VCL-201ENST00000211998 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
VCL-201ENST00000211998 HRES1P13985 223 aa6.64□□□□□ -1.35
VCL-201ENST00000211998 COX6B2Q6YFQ2 88 aa6.62□□□□□ -1.35
VCL-201ENST00000211998 A0A1B0GU33 70 aa6.62□□□□□ -1.35
VCL-201ENST00000211998 IGLV7-43P04211 117 aa6.61□□□□□ -1.35
VCL-201ENST00000211998 MKI67P46013 3256 aaKnown RBP6.61□□□□□ -1.35
VCL-201ENST00000211998 F8P00451 2351 aa6.6□□□□□ -1.35
VCL-201ENST00000211998 POLQO75417 2590 aa6.6□□□□□ -1.35
VCL-201ENST00000211998 BRCA2P51587 3418 aa6.59□□□□□ -1.35
VCL-201ENST00000211998 ACANP16112 2415 aa6.59□□□□□ -1.35
VCL-201ENST00000211998 FLNBO75369 2602 aaKnown RBP6.59□□□□□ -1.36
VCL-201ENST00000211998 CR1P17927 2039 aa6.58□□□□□ -1.36
VCL-201ENST00000211998 IGLV5-37A0A075B6J1 123 aa6.58□□□□□ -1.36
VCL-201ENST00000211998 C9orf92A6NGG3 77 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 MMP24-AS1A0A0U1RRL7 71 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 KRTAP1-3Q8IUG1 177 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 Q8NDZ9 215 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 PSORS1C2Q9UIG4 136 aa6.57□□□□□ -1.36
VCL-201ENST00000211998 CASC10Q5T4H9 136 aa6.56□□□□□ -1.36
VCL-201ENST00000211998 KRTAP1-1Q07627 177 aa6.54□□□□□ -1.36
VCL-201ENST00000211998 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
VCL-201ENST00000211998 SMR3BP02814 79 aaPredicted RBP6.53□□□□□ -1.36
VCL-201ENST00000211998 HTTP42858 3142 aa6.5□□□□□ -1.37
VCL-201ENST00000211998 ASB16-AS1Q495Z4 193 aa6.49□□□□□ -1.37
VCL-201ENST00000211998 A6NN06 94 aa6.49□□□□□ -1.37
VCL-201ENST00000211998 RANBP2P49792 3224 aaKnown RBP6.47□□□□□ -1.37
VCL-201ENST00000211998 LAMA3Q16787 3333 aa6.46□□□□□ -1.38
VCL-201ENST00000211998 LINC00472Q9H8W2 130 aa6.45□□□□□ -1.38
VCL-201ENST00000211998 DNAH12Q6ZR08 3092 aa6.43□□□□□ -1.38
VCL-201ENST00000211998 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
VCL-201ENST00000211998 Q5W150 140 aa6.43□□□□□ -1.38
VCL-201ENST00000211998 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
VCL-201ENST00000211998 SPRR1AP35321 89 aa6.42□□□□□ -1.38
VCL-201ENST00000211998 A0A0C4DFX4 3053 aa6.42□□□□□ -1.38
VCL-201ENST00000211998 TNP2Q05952 138 aa6.4□□□□□ -1.38
VCL-201ENST00000211998 ROMO1P60602 79 aa6.4□□□□□ -1.38
VCL-201ENST00000211998 SZT2Q5T011 3432 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms