RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 TRAV23DV6A0A075B6W5 121 aa8.83□□□□□ -1
ERCC1-201ENST00000013807 E9PLD3 99 aa8.83□□□□□ -1
ERCC1-201ENST00000013807 ZNF73O43830 326 aaPredicted RBP8.83□□□□□ -1
ERCC1-201ENST00000013807 EIF4EBP3O60516 100 aaPredicted RBP8.83□□□□□ -1
ERCC1-201ENST00000013807 FABP4P15090 132 aa8.83□□□□□ -1
ERCC1-201ENST00000013807 ADAMTSL4-AS1Q5T5F5 129 aa8.83□□□□□ -1
ERCC1-201ENST00000013807 A0A0J9YXY3 114 aa8.82□□□□□ -1
ERCC1-201ENST00000013807 XP32Q5T750 250 aa8.82□□□□□ -1
ERCC1-201ENST00000013807 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
ERCC1-201ENST00000013807 CBY1Q9Y3M2 126 aa8.82□□□□□ -1
ERCC1-201ENST00000013807 COLCA2A8K830 154 aa8.8□□□□□ -1
ERCC1-201ENST00000013807 SPRR1BP22528 89 aa8.8□□□□□ -1
ERCC1-201ENST00000013807 LITAFQ99732 161 aa8.78□□□□□ -1
ERCC1-201ENST00000013807 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
ERCC1-201ENST00000013807 TIMM17BO60830 172 aa8.77□□□□□ -1.01
ERCC1-201ENST00000013807 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
ERCC1-201ENST00000013807 LINC01547P58512 204 aaPredicted RBP8.77□□□□□ -1.01
ERCC1-201ENST00000013807 ST20-AS1Q8NBB2 130 aa8.77□□□□□ -1.01
ERCC1-201ENST00000013807 SPANXCQ9NY87 97 aa8.77□□□□□ -1.01
ERCC1-201ENST00000013807 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
ERCC1-201ENST00000013807 LINC00308Q8TCZ7 52 aa8.75□□□□□ -1.01
ERCC1-201ENST00000013807 SYS1-DBNDD2H3BUS1 97 aa8.74□□□□□ -1.01
ERCC1-201ENST00000013807 NPC2P61916 151 aa8.74□□□□□ -1.01
ERCC1-201ENST00000013807 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
ERCC1-201ENST00000013807 SLC25A34Q6PIV7 304 aa8.73□□□□□ -1.01
ERCC1-201ENST00000013807 LINC01545Q5VT33 79 aa8.72□□□□□ -1.01
ERCC1-201ENST00000013807 SPANXDQ9BXN6 97 aa8.71□□□□□ -1.02
ERCC1-201ENST00000013807 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
ERCC1-201ENST00000013807 LINC00518Q8N0U6 118 aa8.7□□□□□ -1.02
ERCC1-201ENST00000013807 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
ERCC1-201ENST00000013807 ELOF1P60002 83 aaKnown RBP8.69□□□□□ -1.02
ERCC1-201ENST00000013807 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
ERCC1-201ENST00000013807 PET117Q6UWS5 81 aa8.69□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BKO60814 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BJP06899 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BOP23527 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BBP33778 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BDP58876 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BCP62807 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 CD164Q04900 197 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST2H2BEQ16778 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.68□□□□□ -1.02
ERCC1-201ENST00000013807 SLC7A5P1Q8MH63 180 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 OR13C6PQ8NH95 151 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BHQ93079 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BNQ99877 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 HIST1H2BMQ99879 126 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 LAMTOR3Q9UHA4 124 aa8.68□□□□□ -1.02
ERCC1-201ENST00000013807 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
ERCC1-201ENST00000013807 KRTAP19-2Q3LHN2 52 aa8.67□□□□□ -1.02
ERCC1-201ENST00000013807 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
ERCC1-201ENST00000013807 Q5XG85 94 aa8.66□□□□□ -1.02
ERCC1-201ENST00000013807 COX7BP24311 80 aa8.65□□□□□ -1.02
ERCC1-201ENST00000013807 C6orf99Q4VX62 202 aa8.64□□□□□ -1.03
ERCC1-201ENST00000013807 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
ERCC1-201ENST00000013807 TTTY13Q9BZ97 58 aa8.63□□□□□ -1.03
ERCC1-201ENST00000013807 PRO1933Q9H354 126 aa8.62□□□□□ -1.03
ERCC1-201ENST00000013807 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
ERCC1-201ENST00000013807 TAL2Q16559 108 aa8.61□□□□□ -1.03
ERCC1-201ENST00000013807 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
ERCC1-201ENST00000013807 HRCT1Q6UXD1 115 aa8.61□□□□□ -1.03
ERCC1-201ENST00000013807 SMIM29Q86T20 159 aa8.61□□□□□ -1.03
ERCC1-201ENST00000013807 IGLV5-48A0A075B6I7 105 aa8.6□□□□□ -1.03
ERCC1-201ENST00000013807 A0A1B0GWB2 263 aa8.59□□□□□ -1.03
ERCC1-201ENST00000013807 IFITM1P13164 125 aa8.59□□□□□ -1.03
ERCC1-201ENST00000013807 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
ERCC1-201ENST00000013807 Q6ZVH6 145 aa8.59□□□□□ -1.03
ERCC1-201ENST00000013807 COPS9Q8WXC6 57 aa8.59□□□□□ -1.03
ERCC1-201ENST00000013807 AKR1D1P51857 326 aa8.58□□□□□ -1.04
ERCC1-201ENST00000013807 Q1RN00 199 aa8.58□□□□□ -1.04
ERCC1-201ENST00000013807 H7C2G1 150 aa8.57□□□□□ -1.04
ERCC1-201ENST00000013807 DEFB105AQ8NG35 78 aa8.57□□□□□ -1.04
ERCC1-201ENST00000013807 IGLV8-61A0A075B6I0 122 aa8.56□□□□□ -1.04
ERCC1-201ENST00000013807 A4D1N5 150 aa8.56□□□□□ -1.04
ERCC1-201ENST00000013807 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
ERCC1-201ENST00000013807 MT1HP80294 61 aa8.56□□□□□ -1.04
ERCC1-201ENST00000013807 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
ERCC1-201ENST00000013807 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
ERCC1-201ENST00000013807 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
ERCC1-201ENST00000013807 FSIP2Q5CZC0 6907 aa8.53□□□□□ -1.04
ERCC1-201ENST00000013807 A6NDN8 102 aa8.52□□□□□ -1.05
ERCC1-201ENST00000013807 KRTDAPP60985 99 aa8.52□□□□□ -1.05
ERCC1-201ENST00000013807 MUSTN1Q8IVN3 82 aa8.52□□□□□ -1.05
ERCC1-201ENST00000013807 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
ERCC1-201ENST00000013807 CRCT1Q9UGL9 99 aa8.51□□□□□ -1.05
ERCC1-201ENST00000013807 C20orf202A1L168 122 aa8.5□□□□□ -1.05
ERCC1-201ENST00000013807 NHP2Q9NX24 153 aaKnown RBP8.5□□□□□ -1.05
ERCC1-201ENST00000013807 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
ERCC1-201ENST00000013807 PCP2Q8IVA1 136 aa8.49□□□□□ -1.05
ERCC1-201ENST00000013807 RPL37P61927 97 aaKnown RBP8.48□□□□□ -1.05
ERCC1-201ENST00000013807 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
ERCC1-201ENST00000013807 A0A0G2JQZ4 141 aa8.47□□□□□ -1.05
ERCC1-201ENST00000013807 SNRPEP62304 92 aaKnown RBP8.47□□□□□ -1.05
ERCC1-201ENST00000013807 LORP23490 312 aaPredicted RBP8.46□□□□□ -1.06
ERCC1-201ENST00000013807 TCL1BO95988 128 aa8.45□□□□□ -1.06
ERCC1-201ENST00000013807 ATOH7Q8N100 152 aa8.45□□□□□ -1.06
ERCC1-201ENST00000013807 KRTAP10-6P60371 365 aaPredicted RBP8.42□□□□□ -1.06
ERCC1-201ENST00000013807 VAMP3Q15836 100 aa8.42□□□□□ -1.06
ERCC1-201ENST00000013807 LINC00575Q6W349 94 aa8.42□□□□□ -1.06
ERCC1-201ENST00000013807 Q6JHZ5 121 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms