RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Fgfbp1O70514 251 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 HrkP62816 92 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr1199Q8VF94 310 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Timm23Q9WTQ8 209 aa10.19□□□□□ -0.78
Nup88-203ENSMUST00000108531 Timm8bP62077 83 aaKnown RBP10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Stxbp6Q8R3T5 210 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Fxyd4Q9D2W0 88 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 BptfA2A654 3036 aaKnown RBP10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 PoleQ9WVF7 2283 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm765B2RVL9 189 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Onecut1O08755 465 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr761Q7TRJ0 323 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 9130230L23RikQ8CC80 163 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Habp2Q8K0D2 558 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Slc25a39Q9D8K8 359 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cml3Q9JIY8 226 aa10.18□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv1-69A0A0G2JFS5 117 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 P01793 123 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Mamld1P0C6A2 803 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Sub1P11031 127 aaKnown RBP10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 TbpP29037 316 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Col8a1Q00780 744 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Hnrnpa3Q8BG05 379 aaKnown RBP10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ndufb3Q9CQZ6 104 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Borcs7Q9CRC6 105 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Lyg1Q9D7Q0 197 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Abca7Q91V24 2159 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv4-1A0A075B5R5 116 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv1-81A0A075B5Y4 117 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv1-62-2A0A0A6YXZ4 119 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm3285A0A1W2P7U0 201 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Zfp983E9PUT0 460 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Mc5rP41149 325 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Pmis2Q497Q9 96 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr149Q60888 311 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Insig2Q91WG1 225 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Vps25Q9CQ80 176 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 EsdQ9R0P3 282 aa10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cnot1Q6ZQ08 2375 aaKnown RBP10.17□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ncoa6Q9JL19 2067 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm20481G3UXK4 153 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm15292L7N231 93 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Brs3O54798 399 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr1012Q8VFJ7 311 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ormdl3Q9CPZ6 153 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Rab1bQ9D1G1 201 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Map1aQ9QYR6 2776 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gvin1Q80SU7 2427 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Trav9d-1A0A075B699 112 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Trav6n-6A0A075B6B2 114 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Rhox7bA6PW38 321 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cd3eP22646 189 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Rbms1Q91W59 403 aaKnown RBP10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Tmem89Q9DA04 169 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 IcosQ9WVS0 200 aa10.16□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv1-55A0A075B5W6 117 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ighv8-4A0A0A6YW26 117 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 D930048N14RikA2AA67 225 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Gm10073E9Q3T0 114 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr1185-ps1F6XP16 303 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Nat6Q9R123 314 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Dopey1Q8BL99 2399 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Shisal2aA2A9G7 189 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Cd5P13379 494 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Arf6P62331 175 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ssbp4Q3U4B1 363 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Spata46Q4FZF2 204 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Snrnp40Q6PE01 358 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr904Q7TRC9 310 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Ammecr1lQ8JZZ6 310 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 Olfr1243Q8VGM7 305 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 GlrxQ9QUH0 107 aa10.15□□□□□ -0.78
Nup88-203ENSMUST00000108531 KalrnA2CG49 2964 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ighv7-4A0A0A6YXL5 121 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm28305F6U473 122 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Pde6hP61249 83 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ripply2Q2WG76 128 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gng7Q61016 68 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Card19Q9D1I2 183 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ttc32Q9DAC7 148 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 GlmpQ9JHJ3 404 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Bhlha15Q9QYC3 197 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Myod1P10085 318 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Igfbpl1Q80W15 270 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 GaptQ8CB93 157 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Mrpl20Q9CQL4 149 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tomm40Q9QYA2 361 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Akap9Q70FJ1 3797 aa10.14□□□□□ -0.79
Nup88-203ENSMUST00000108531 Esp23A8R0V5 104 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Rasl11aQ6IMB1 242 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Ccsmst1Q6RUT7 136 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Defa22Q8C1N8 93 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Scnm1Q8K136 229 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Cdpf1Q8R3A2 119 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Tmem52Q9D702 196 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Crybb3Q9JJU9 211 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Trav23A0A0G2JG17 115 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 Gm5426J3QNM7 103 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 BokO35425 213 aa10.13□□□□□ -0.79
Nup88-203ENSMUST00000108531 P01748 117 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 70.1 ms