RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 KIR2DL4Q99706 377 aa6.37□□□□□ -1.39
PHGDH-212ENST00000641247 PRO0255Q9UI72 69 aa6.37□□□□□ -1.39
PHGDH-212ENST00000641247 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
PHGDH-212ENST00000641247 IBA57-AS1B1ANH7 110 aa6.36□□□□□ -1.39
PHGDH-212ENST00000641247 VCYO14598 125 aa6.36□□□□□ -1.39
PHGDH-212ENST00000641247 LECT2O14960 151 aa6.36□□□□□ -1.39
PHGDH-212ENST00000641247 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
PHGDH-212ENST00000641247 Q9HAA7 133 aa6.36□□□□□ -1.39
PHGDH-212ENST00000641247 J3QQQ9 107 aa6.35□□□□□ -1.39
PHGDH-212ENST00000641247 TRACP01848 142 aa6.35□□□□□ -1.39
PHGDH-212ENST00000641247 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
PHGDH-212ENST00000641247 TMEM258P61165 79 aa6.35□□□□□ -1.39
PHGDH-212ENST00000641247 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
PHGDH-212ENST00000641247 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 TRBV27A0A0K0K1C4 114 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 LOC100131303A0A0U1RQF7 123 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 CRYGAP11844 174 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 GYPEP15421 78 aa6.34□□□□□ -1.39
PHGDH-212ENST00000641247 TRGV4A0A0C4DH28 118 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 IGHV3-38A0A0C4DH36 116 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 I3L3M4 83 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 TIMM17BO60830 172 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 COX7CP15954 63 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 RHOHQ15669 191 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 Q8N3U1 123 aa6.33□□□□□ -1.4
PHGDH-212ENST00000641247 A4D1N5 150 aa6.32□□□□□ -1.4
PHGDH-212ENST00000641247 NDUFC2-KCTD14E9PQ53 114 aa6.32□□□□□ -1.4
PHGDH-212ENST00000641247 RPL36AP83881 106 aaKnown RBP6.32□□□□□ -1.4
PHGDH-212ENST00000641247 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
PHGDH-212ENST00000641247 LINC01556Q5JQF7 62 aa6.32□□□□□ -1.4
PHGDH-212ENST00000641247 DAND5Q8N907 189 aa6.32□□□□□ -1.4
PHGDH-212ENST00000641247 RPL36ALQ969Q0 106 aaKnown RBP6.32□□□□□ -1.4
PHGDH-212ENST00000641247 Q9UF83 564 aa6.32□□□□□ -1.4
PHGDH-212ENST00000641247 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
PHGDH-212ENST00000641247 RPL37AP61513 92 aaKnown RBP6.31□□□□□ -1.4
PHGDH-212ENST00000641247 HERVK_113P63121 156 aa6.31□□□□□ -1.4
PHGDH-212ENST00000641247 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 FAM236AA0A1B0GUQ0 79 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 FAM236BA0A1B0GV22 79 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 TSHBP01222 138 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 LINC00694P0DN24 101 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
PHGDH-212ENST00000641247 PPDPFQ9H3Y8 114 aa6.3□□□□□ -1.4
PHGDH-212ENST00000641247 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
PHGDH-212ENST00000641247 TEX49A0A1B0GTD5 131 aa6.29□□□□□ -1.4
PHGDH-212ENST00000641247 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
PHGDH-212ENST00000641247 LST1O00453 97 aa6.29□□□□□ -1.4
PHGDH-212ENST00000641247 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
PHGDH-212ENST00000641247 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
PHGDH-212ENST00000641247 TMEM223A0PJW6 202 aa6.28□□□□□ -1.4
PHGDH-212ENST00000641247 H7C423 109 aa6.28□□□□□ -1.4
PHGDH-212ENST00000641247 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
PHGDH-212ENST00000641247 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
PHGDH-212ENST00000641247 C5orf38Q86SI9 138 aa6.28□□□□□ -1.4
PHGDH-212ENST00000641247 MUSTN1Q8IVN3 82 aa6.28□□□□□ -1.4
PHGDH-212ENST00000641247 LPAP08519 4548 aa6.27□□□□□ -1.41
PHGDH-212ENST00000641247 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
PHGDH-212ENST00000641247 BCE1O60756 84 aa6.27□□□□□ -1.41
PHGDH-212ENST00000641247 NDUFC2O95298 119 aa6.27□□□□□ -1.41
PHGDH-212ENST00000641247 C20orf203Q8NBC4 194 aa6.27□□□□□ -1.41
PHGDH-212ENST00000641247 TRIAP1O43715 76 aa6.26□□□□□ -1.41
PHGDH-212ENST00000641247 TIRAPP58753 221 aa6.26□□□□□ -1.41
PHGDH-212ENST00000641247 ZNF22P17026 224 aaPredicted RBP6.25□□□□□ -1.41
PHGDH-212ENST00000641247 RPL39P62891 51 aaKnown RBP6.25□□□□□ -1.41
PHGDH-212ENST00000641247 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
PHGDH-212ENST00000641247 MIAQ16674 131 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 Q6ZRU5 148 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 SERP2Q8N6R1 65 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 TIMM21Q9BVV7 248 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 PYGO1Q9Y3Y4 419 aa6.25□□□□□ -1.41
PHGDH-212ENST00000641247 H7C2G1 150 aa6.24□□□□□ -1.41
PHGDH-212ENST00000641247 PANO1I0J062 215 aa6.24□□□□□ -1.41
PHGDH-212ENST00000641247 PRSS2P07478 247 aa6.24□□□□□ -1.41
PHGDH-212ENST00000641247 RPL18AQ02543 176 aaKnown RBP6.24□□□□□ -1.41
PHGDH-212ENST00000641247 LELP1Q5T871 98 aa6.24□□□□□ -1.41
PHGDH-212ENST00000641247 NTM-AS1Q6ZSK4 140 aa6.24□□□□□ -1.41
PHGDH-212ENST00000641247 TRBV6-8A0A0A6YYG3 113 aa6.23□□□□□ -1.41
PHGDH-212ENST00000641247 COX7A2LO14548 114 aa6.23□□□□□ -1.41
PHGDH-212ENST00000641247 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
PHGDH-212ENST00000641247 AMELXQ99217 191 aa6.23□□□□□ -1.41
PHGDH-212ENST00000641247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-212ENST00000641247 IGKV2-29A2NJV5 120 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-212ENST00000641247 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
PHGDH-212ENST00000641247 TMEM243Q9BU79 118 aa6.22□□□□□ -1.41
PHGDH-212ENST00000641247 UBE2D4Q9Y2X8 147 aa6.22□□□□□ -1.41
PHGDH-212ENST00000641247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-212ENST00000641247 TRAV13-1A0A0B4J241 112 aa6.21□□□□□ -1.42
PHGDH-212ENST00000641247 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.42
PHGDH-212ENST00000641247 Q6JHZ5 121 aa6.21□□□□□ -1.42
PHGDH-212ENST00000641247 DPH3Q96FX2 82 aa6.21□□□□□ -1.42
PHGDH-212ENST00000641247 MUC2Q02817 5179 aa6.21□□□□□ -1.42
PHGDH-212ENST00000641247 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
PHGDH-212ENST00000641247 TRAV8-3A0A0A6YYJ7 113 aa6.2□□□□□ -1.42
PHGDH-212ENST00000641247 UBE2L6O14933 153 aa6.2□□□□□ -1.42
PHGDH-212ENST00000641247 DNAL4O96015 105 aa6.2□□□□□ -1.42
PHGDH-212ENST00000641247 NDUFA12Q9UI09 145 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms